BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00038750
         (612 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi...   306   4e-81
ref|XP_007217076.1| hypothetical protein PRUPE_ppa000834mg [Prun...   305   5e-81
ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containi...   304   1e-80
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]   304   2e-80
ref|XP_006491629.1| PREDICTED: pentatricopeptide repeat-containi...   298   6e-79
ref|XP_006447317.1| hypothetical protein CICLE_v10017547mg [Citr...   298   6e-79
gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis]     298   8e-79
ref|XP_007043514.1| Pentatricopeptide repeat (PPR) superfamily p...   295   9e-78
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,...   294   2e-77
ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Popu...   291   8e-77
ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containi...   287   1e-75
ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   286   4e-75
ref|XP_006390515.1| hypothetical protein EUTSA_v10019624mg, part...   275   6e-72
ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Caps...   275   6e-72
ref|XP_002887500.1| pentatricopeptide repeat-containing protein ...   272   5e-71
ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containi...   269   5e-70
ref|XP_004490797.1| PREDICTED: pentatricopeptide repeat-containi...   267   2e-69
ref|XP_004243803.1| PREDICTED: pentatricopeptide repeat-containi...   266   5e-69
ref|NP_177512.1| pentatricopeptide repeat-containing protein [Ar...   265   6e-69
ref|XP_003616196.1| Pentatricopeptide repeat-containing protein ...   259   3e-67

>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Vitis vinifera]
          Length = 1008

 Score =  306 bits (783), Expect = 4e-81
 Identities = 151/204 (74%), Positives = 173/204 (84%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDM--ESGTDPISPKHFLSTEL 178
           NTV+RVLKD GEFD  D+F+++WCVG+VEL + DL+SV D   E G+ P+S KHFLSTEL
Sbjct: 258 NTVVRVLKDAGEFDWADRFYRDWCVGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTEL 317

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           FK GGR P S +    N + S RKPR+ ATYNTLIDLYGKAGRLKDA+ VFAEMLK GVA
Sbjct: 318 FKIGGRRPISNIMDSSNTDGSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVA 377

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            DTITFNTMI+TCG+HGHLSEAE+LL++MEER ISPDTKTYNIFLSLYA+ GNIDAAL C
Sbjct: 378 MDTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKC 437

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           YRKIREVGLFPD VTHRA+LH+LC
Sbjct: 438 YRKIREVGLFPDVVTHRAVLHVLC 461



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 29/112 (25%), Positives = 58/112 (51%)
 Frame = +2

Query: 263 ATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSK 442
           +TYN+LI ++     + +A  + AEM K G  P  +TF+ +I      G L +A  +  +
Sbjct: 590 STYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEE 649

Query: 443 MEERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAIL 598
           M    + P+   Y   ++ ++  GN++ AL  +RK+ E G+  + +   +++
Sbjct: 650 MVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLI 701



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 28/111 (25%), Positives = 58/111 (52%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN ++  YGKA     A  +F  M   G  P+  T+N++I        + EA  +L++M+
Sbjct: 557 YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQ 616

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
           +    P   T++  ++ YA +G +  A+  Y ++  +G+ P+ V + ++++
Sbjct: 617 KMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLIN 667


>ref|XP_007217076.1| hypothetical protein PRUPE_ppa000834mg [Prunus persica]
           gi|462413226|gb|EMJ18275.1| hypothetical protein
           PRUPE_ppa000834mg [Prunus persica]
          Length = 987

 Score =  305 bits (782), Expect = 5e-81
 Identities = 147/204 (72%), Positives = 173/204 (84%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDM--ESGTDPISPKHFLSTEL 178
           NTV++ LKD GEFD+ DKF+K+WC G++ELD LDLDS+ D   +SG +PIS KHFLSTEL
Sbjct: 257 NTVVKALKDAGEFDRADKFYKDWCDGKIELDELDLDSMGDSVNDSGLEPISFKHFLSTEL 316

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           FK GGR+P SK+ +  + E+S+RKPR  +TYN LIDLYGKAGRL DA+ VF EM+KSGVA
Sbjct: 317 FKTGGRIPTSKIKASSDTENSIRKPRQTSTYNALIDLYGKAGRLDDAANVFGEMMKSGVA 376

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            D ITFNTMIFTCG+HGHLSEAE+LLSKMEER ISPDT+TYNIFLSLYA+ GNIDAAL C
Sbjct: 377 MDAITFNTMIFTCGSHGHLSEAEALLSKMEERGISPDTRTYNIFLSLYADAGNIDAALNC 436

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           YRKIREVGL PD V+HR +LH+LC
Sbjct: 437 YRKIREVGLSPDIVSHRTVLHVLC 460



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/123 (25%), Positives = 61/123 (49%)
 Frame = +2

Query: 233 ESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGH 412
           + SVR+ +    YN +I  YGKA     A  +F  M   G  PD  T+N++I        
Sbjct: 508 KDSVRQKKDVVEYNVMIKAYGKAKLYDKAFSLFKGMRNHGTWPDKCTYNSLIQMFSGGDL 567

Query: 413 LSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRA 592
           + +A  +L++M E    P +  ++  ++ YA +G +  A+  Y+ +   G+ P+   + +
Sbjct: 568 VDQARDVLTEMREMGFKPHSLAFSALIACYARLGQLSDAVDVYQDLVNSGVQPNEFVYGS 627

Query: 593 ILH 601
           +++
Sbjct: 628 LIN 630


>ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Fragaria vesca subsp. vesca]
          Length = 1000

 Score =  304 bits (779), Expect = 1e-80
 Identities = 144/204 (70%), Positives = 177/204 (86%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGT--DPISPKHFLSTEL 178
           NTV+R LK+  EFD+ DKF+K+WC GR+ELD+LDLD++ D   G+  +PIS KHFLSTEL
Sbjct: 233 NTVVRALKNAEEFDRADKFYKDWCTGRIELDDLDLDTMGDSVVGSVSEPISFKHFLSTEL 292

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           FK GGR+P SK+ + +N E+S++KPR+ +TYN+LIDLYGKAGRL DA+ VF +M+KSGVA
Sbjct: 293 FKTGGRVPTSKIMTSMNTENSIQKPRLTSTYNSLIDLYGKAGRLNDAANVFGDMMKSGVA 352

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            D ITFNTMIFTCG+HGHL EAE+LL+KMEER ISPDT+TYNIFLSLYA++GNIDAAL C
Sbjct: 353 MDVITFNTMIFTCGSHGHLLEAEALLNKMEERGISPDTRTYNIFLSLYADMGNIDAALDC 412

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           YRKIREVGL+PDTV+HR ILH+LC
Sbjct: 413 YRKIREVGLYPDTVSHRTILHVLC 436



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/111 (27%), Positives = 58/111 (52%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN +I  YGKA     A  +F  M K G  PD  T+N++I        +  A  LL++M+
Sbjct: 533 YNVMIKAYGKAKLYDKAFSLFRGMKKHGTWPDECTYNSLIQMFSGGDLVDRARDLLTEMQ 592

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
           E  + P + T++  ++ YA +G +  A+  Y+ + + G  P+   + ++++
Sbjct: 593 ETGLKPQSLTFSALIACYARLGQLSDAVDVYQDMVKSGTKPNEFVYGSLIN 643



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 47/200 (23%), Positives = 82/200 (41%)
 Frame = +2

Query: 5    NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
            N +++       +DK    F+         D    +S+  M SG D +     L TE+ +
Sbjct: 534  NVMIKAYGKAKLYDKAFSLFRGMKKHGTWPDECTYNSLIQMFSGGDLVDRARDLLTEMQE 593

Query: 185  AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
             G                   KP+ + T++ LI  Y + G+L DA  V+ +M+KSG  P+
Sbjct: 594  TG------------------LKPQ-SLTFSALIACYARLGQLSDAVDVYQDMVKSGTKPN 634

Query: 365  TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
               + ++I      G + EA      MEE  IS +       +  Y   G+   A V Y 
Sbjct: 635  EFVYGSLINGFAETGRVEEALKYFHLMEESGISANQIVLTSLIKAYGKAGSHKGAEVLYE 694

Query: 545  KIREVGLFPDTVTHRAILHI 604
            +++     PD V   +++++
Sbjct: 695  RLKGFDGGPDVVASNSMINL 714


>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score =  304 bits (778), Expect = 2e-80
 Identities = 150/204 (73%), Positives = 172/204 (84%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5    NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDM--ESGTDPISPKHFLSTEL 178
            NTV+RVLKD GEFD  D+F+++WCVG+VEL + DL+SV D   E G+ P+S KHFLSTEL
Sbjct: 563  NTVVRVLKDAGEFDWADRFYRDWCVGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTEL 622

Query: 179  FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
            FK GGR P S +    N + S  KPR+ ATYNTLIDLYGKAGRLKDA+ VFAEMLK GVA
Sbjct: 623  FKIGGRRPISNIMDSSNTDGSRHKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVA 682

Query: 359  PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
             DTITFNTMI+TCG+HGHLSEAE+LL++MEER ISPDTKTYNIFLSLYA+ GNIDAAL C
Sbjct: 683  MDTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKC 742

Query: 539  YRKIREVGLFPDTVTHRAILHILC 610
            YRKIREVGLFPD VTHRA+LH+LC
Sbjct: 743  YRKIREVGLFPDVVTHRAVLHVLC 766



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 29/112 (25%), Positives = 58/112 (51%)
 Frame = +2

Query: 263  ATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSK 442
            +TYN+LI ++     + +A  + AEM K G  P  +TF+ +I      G L +A  +  +
Sbjct: 895  STYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEE 954

Query: 443  MEERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAIL 598
            M    + P+   Y   ++ ++  GN++ AL  +RK+ E G+  + +   +++
Sbjct: 955  MVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLI 1006



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 28/111 (25%), Positives = 58/111 (52%)
 Frame = +2

Query: 269  YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
            YN ++  YGKA     A  +F  M   G  P+  T+N++I        + EA  +L++M+
Sbjct: 862  YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQ 921

Query: 449  ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
            +    P   T++  ++ YA +G +  A+  Y ++  +G+ P+ V + ++++
Sbjct: 922  KMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLIN 972


>ref|XP_006491629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Citrus sinensis]
          Length = 1004

 Score =  298 bits (764), Expect = 6e-79
 Identities = 148/202 (73%), Positives = 177/202 (87%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
           NTV+RVLK+VGEFD  D+F+K+WC+GR+ELD+L+LDS DD+  G+ P+S KHFLSTELF+
Sbjct: 243 NTVVRVLKEVGEFDSADRFYKDWCLGRLELDDLELDSTDDL--GSTPVSFKHFLSTELFR 300

Query: 185 AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
            GGR P S+    +++ +SVRKPR+ +TYNTLIDLYGKAGRL+DA+ VFAEMLKSGVA D
Sbjct: 301 TGGRNPISRNMGLLDMGNSVRKPRLTSTYNTLIDLYGKAGRLQDAANVFAEMLKSGVAVD 360

Query: 365 TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
           TITFNTMI+TCG+HG+LSEAE+L   MEERRISPDTKTYNIFLSLYA+VGNI+AAL  Y 
Sbjct: 361 TITFNTMIYTCGSHGNLSEAEALFCMMEERRISPDTKTYNIFLSLYADVGNINAALRYYW 420

Query: 545 KIREVGLFPDTVTHRAILHILC 610
           KIREVGLFPD+VT RAILHILC
Sbjct: 421 KIREVGLFPDSVTQRAILHILC 442



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/111 (27%), Positives = 56/111 (50%)
 Frame = +2

Query: 266 TYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKM 445
           TYN+L  ++     +  A  + AEM  +G  P  +TF+++I      G LS A  L  +M
Sbjct: 573 TYNSLAQMFAGGDLMGQAVDLLAEMQGAGFKPQCLTFSSVIAAYARLGQLSNAVDLFHEM 632

Query: 446 EERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAIL 598
               + P+   Y   ++ +A  G ++ AL  +R +RE GL+ + +   +++
Sbjct: 633 RRAGVEPNEVVYGSLINGFAATGKVEEALQYFRMMRECGLWANQIVLTSLI 683



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/140 (24%), Positives = 68/140 (48%)
 Frame = +2

Query: 185 AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
           AGG +    V     ++ +  KP+   T++++I  Y + G+L +A  +F EM ++GV P+
Sbjct: 582 AGGDLMGQAVDLLAEMQGAGFKPQ-CLTFSSVIAAYARLGQLSNAVDLFHEMRRAGVEPN 640

Query: 365 TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
            + + ++I      G + EA      M E  +  +       +  Y+ +G ++ A   Y 
Sbjct: 641 EVVYGSLINGFAATGKVEEALQYFRMMRECGLWANQIVLTSLIKAYSKIGCLEGAKQVYE 700

Query: 545 KIREVGLFPDTVTHRAILHI 604
           K++E+   PDTV    ++ +
Sbjct: 701 KMKEMEGGPDTVASNTMISL 720


>ref|XP_006447317.1| hypothetical protein CICLE_v10017547mg [Citrus clementina]
           gi|557549928|gb|ESR60557.1| hypothetical protein
           CICLE_v10017547mg [Citrus clementina]
          Length = 962

 Score =  298 bits (764), Expect = 6e-79
 Identities = 148/202 (73%), Positives = 177/202 (87%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
           NTV+RVLK+VGEFD  D+F+K+WC+GR+ELD+L+LDS DD+  G+ P+S KHFLSTELF+
Sbjct: 243 NTVVRVLKEVGEFDSADRFYKDWCLGRLELDDLELDSTDDL--GSTPVSFKHFLSTELFR 300

Query: 185 AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
            GGR P S+    +++ +SVRKPR+ +TYNTLIDLYGKAGRL+DA+ VFAEMLKSGVA D
Sbjct: 301 TGGRNPISRNMGLLDMGNSVRKPRLTSTYNTLIDLYGKAGRLQDAANVFAEMLKSGVAVD 360

Query: 365 TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
           TITFNTMI+TCG+HG+LSEAE+L   MEERRISPDTKTYNIFLSLYA+VGNI+AAL  Y 
Sbjct: 361 TITFNTMIYTCGSHGNLSEAEALFCMMEERRISPDTKTYNIFLSLYADVGNINAALRYYW 420

Query: 545 KIREVGLFPDTVTHRAILHILC 610
           KIREVGLFPD+VT RAILHILC
Sbjct: 421 KIREVGLFPDSVTQRAILHILC 442



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/111 (27%), Positives = 56/111 (50%)
 Frame = +2

Query: 266 TYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKM 445
           TYN+L  ++     +  A  + AEM  +G  P  +TF+++I      G LS A  L  +M
Sbjct: 531 TYNSLAQMFAGGDLMGQAVDLLAEMQGAGFKPQCLTFSSVIAAYARLGQLSNAVDLFHEM 590

Query: 446 EERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAIL 598
               + P+   Y   ++ +A  G ++ AL  +R +RE GL+ + +   +++
Sbjct: 591 RRAGVEPNEVVYGSLINGFAATGKVEEALQYFRMMRECGLWANQIVLTSLI 641



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/140 (24%), Positives = 68/140 (48%)
 Frame = +2

Query: 185 AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
           AGG +    V     ++ +  KP+   T++++I  Y + G+L +A  +F EM ++GV P+
Sbjct: 540 AGGDLMGQAVDLLAEMQGAGFKPQ-CLTFSSVIAAYARLGQLSNAVDLFHEMRRAGVEPN 598

Query: 365 TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
            + + ++I      G + EA      M E  +  +       +  Y+ +G ++ A   Y 
Sbjct: 599 EVVYGSLINGFAATGKVEEALQYFRMMRECGLWANQIVLTSLIKAYSKIGCLEGAKQVYE 658

Query: 545 KIREVGLFPDTVTHRAILHI 604
           K++E+   PDTV    ++ +
Sbjct: 659 KMKEMEGGPDTVASNTMISL 678


>gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis]
          Length = 1018

 Score =  298 bits (763), Expect = 8e-79
 Identities = 145/203 (71%), Positives = 180/203 (88%), Gaps = 1/203 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
           +TV+RVLKD GE+D+ D+F+K+WC+GR+ELD   LDS+ D  SG++P+S KHFLSTELF+
Sbjct: 255 STVVRVLKDGGEYDRADRFYKDWCMGRIELD---LDSMVD-GSGSEPVSFKHFLSTELFR 310

Query: 185 AGGRMPPSK-VSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAP 361
            GGR+P S+ ++S +  ESS+RKPR+ +TYNTLID+YGKAGRL+DA+ VF EMLKSGVA 
Sbjct: 311 TGGRIPGSRSLTSSLESESSIRKPRLTSTYNTLIDMYGKAGRLEDAANVFGEMLKSGVAM 370

Query: 362 DTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCY 541
           DTITFNTMIFTCG+HGHL+EAE+LL+KMEERRISPDTKTYNIFLSLYA VG+ID +L CY
Sbjct: 371 DTITFNTMIFTCGSHGHLAEAEALLAKMEERRISPDTKTYNIFLSLYAEVGDIDKSLECY 430

Query: 542 RKIREVGLFPDTVTHRAILHILC 610
           RKIR+VGL+PD VTHRA+LH+LC
Sbjct: 431 RKIRDVGLYPDLVTHRAVLHVLC 453



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 32/111 (28%), Positives = 58/111 (52%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN ++  YGKA     A  +F  M   G  PD  T+N++I        +  A  LLS+M+
Sbjct: 550 YNVMVKAYGKAKLYDKALSLFKGMRNHGAWPDECTYNSLIQMFSKGDLVDRAVDLLSEMQ 609

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
              + P+  T++  ++ YA +G +  A+  Y+K+   G+ P+ V + A+++
Sbjct: 610 GMGLKPNCLTFSALIACYARLGQLSEAVGVYQKMLSTGVKPNEVVYGALVN 660



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 29/111 (26%), Positives = 58/111 (52%)
 Frame = +2

Query: 266 TYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKM 445
           TYN+LI ++ K   +  A  + +EM   G+ P+ +TF+ +I      G LSEA  +  KM
Sbjct: 584 TYNSLIQMFSKGDLVDRAVDLLSEMQGMGLKPNCLTFSALIACYARLGQLSEAVGVYQKM 643

Query: 446 EERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAIL 598
               + P+   Y   ++ +A  G ++ AL  ++++ E G+  + +   +++
Sbjct: 644 LSTGVKPNEVVYGALVNGFAESGKVEEALKYFQRMEESGISANQIVLTSLI 694


>ref|XP_007043514.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508707449|gb|EOX99345.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 1007

 Score =  295 bits (754), Expect = 9e-78
 Identities = 143/204 (70%), Positives = 172/204 (84%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDME--SGTDPISPKHFLSTEL 178
           NTV++VLKD  EFD+ D+F+K+WC+G+V+L++L+LDS+ D E  SG+ P+S KHFLSTEL
Sbjct: 242 NTVVKVLKDAMEFDRADRFYKDWCIGKVDLNDLELDSMIDFENGSGSAPVSFKHFLSTEL 301

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           F+ GGR P  +     + ESS+RKPR+ +TYNTLIDLYGKAGRL+DA+ +FAEMLKSGV 
Sbjct: 302 FRTGGRSPVLETLGSPDTESSIRKPRLTSTYNTLIDLYGKAGRLRDAADIFAEMLKSGVV 361

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            DTITFNTMIFTCG+HGH  EAESLLSKMEE+ I PDTKTYNIFLSLYA  GNI+AAL  
Sbjct: 362 MDTITFNTMIFTCGSHGHFLEAESLLSKMEEKGIPPDTKTYNIFLSLYAGAGNIEAALEY 421

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           YRKIR+VGLFPD VTHRA+LHILC
Sbjct: 422 YRKIRKVGLFPDIVTHRAVLHILC 445



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 48/200 (24%), Positives = 86/200 (43%)
 Frame = +2

Query: 5    NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
            N +++       +DK    FK+        D    +S+  M SG D +     L  E+  
Sbjct: 543  NVMVKAYGKAELYDKAFSLFKSMRHNGTWPDECTYNSLIQMLSGGDLVDQARDLLGEMQA 602

Query: 185  AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
            AG                   KP+   T+++LI  Y + G+L DA   + EM+ +GV P+
Sbjct: 603  AGF------------------KPK-CLTFSSLIACYVRLGQLSDAVDGYQEMISAGVKPN 643

Query: 365  TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
             + + ++I      G + EA      MEE  +S +       +  Y+ VG ++ A   Y 
Sbjct: 644  EVVYGSLINGFAEIGDVEEALRYFQMMEESGVSANKIVLTSLIKAYSKVGCLEGAKQVYE 703

Query: 545  KIREVGLFPDTVTHRAILHI 604
            K++++   PD +   +IL++
Sbjct: 704  KMKDLEGGPDIIASNSILNL 723



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 29/119 (24%), Positives = 59/119 (49%)
 Frame = +2

Query: 245 RKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEA 424
           R+ +    YN ++  YGKA     A  +F  M  +G  PD  T+N++I        + +A
Sbjct: 534 RQKKGIVEYNVMVKAYGKAELYDKAFSLFKSMRHNGTWPDECTYNSLIQMLSGGDLVDQA 593

Query: 425 ESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
             LL +M+     P   T++  ++ Y  +G +  A+  Y+++   G+ P+ V + ++++
Sbjct: 594 RDLLGEMQAAGFKPKCLTFSSLIACYVRLGQLSDAVDGYQEMISAGVKPNEVVYGSLIN 652


>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1029

 Score =  294 bits (752), Expect = 2e-77
 Identities = 139/204 (68%), Positives = 175/204 (85%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDME--SGTDPISPKHFLSTEL 178
           NTV++VLKD GEFD+   F+K+WC+G++ELD+L+L+S+ D+E  SG+ P+S KHFLSTEL
Sbjct: 255 NTVVKVLKDAGEFDRAHSFYKDWCIGKIELDDLELNSMGDIEHGSGSGPVSFKHFLSTEL 314

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           FK GGR+   K+    + E  VRKPR+ +TYNTLIDLYGKAGRL DA+ +F++M+KSGVA
Sbjct: 315 FKIGGRIRTPKIVGSSDAEKIVRKPRLTSTYNTLIDLYGKAGRLGDAADIFSDMMKSGVA 374

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            DTITFNTMI+TCG+HGHLSEAE+LL+KME+R +SPDT+TYNIFLSLYA+ GNIDAA+ C
Sbjct: 375 MDTITFNTMIYTCGSHGHLSEAETLLNKMEDRGVSPDTRTYNIFLSLYADEGNIDAAIKC 434

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           Y+KIREVGL PDTV+HRAILH LC
Sbjct: 435 YKKIREVGLLPDTVSHRAILHELC 458



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/119 (28%), Positives = 64/119 (53%)
 Frame = +2

Query: 248 KPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAE 427
           KP+  AT++++I  Y + G+L DA+ V+ EM+K GV P+ + +  +I      G++ EA 
Sbjct: 619 KPQ-CATFSSIIACYARLGQLSDAAGVYQEMVKVGVKPNEVVYGAIINGYAEEGNVKEAL 677

Query: 428 SLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILHI 604
                MEE  IS +       + +Y+ +G  D+A   Y+K+  +   PD +   +++ +
Sbjct: 678 KYFHMMEEYGISANQIVLTSLIKVYSKLGCFDSAKQLYQKMMCLEGGPDIIASNSMISL 736



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 32/111 (28%), Positives = 58/111 (52%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN +I  YGK    + A  +F  M   G  PD  T+N++I        + +A  LL++M+
Sbjct: 555 YNVMIKAYGKGKLYEKAFTLFRSMRHHGTWPDECTYNSLIQMFSGADLMDQARDLLTEMQ 614

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
                P   T++  ++ YA +G +  A   Y+++ +VG+ P+ V + AI++
Sbjct: 615 GVGFKPQCATFSSIIACYARLGQLSDAAGVYQEMVKVGVKPNEVVYGAIIN 665


>ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Populus trichocarpa]
           gi|550325820|gb|EEE95296.2| hypothetical protein
           POPTR_0013s14110g [Populus trichocarpa]
          Length = 965

 Score =  291 bits (746), Expect = 8e-77
 Identities = 147/204 (72%), Positives = 172/204 (84%), Gaps = 2/204 (0%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGT--DPISPKHFLSTEL 178
           NTV++VLKDVGEFDK ++F+K+WC GRVELD L+LDS+ D E+G+  +P+S KHFL TEL
Sbjct: 203 NTVVKVLKDVGEFDKAERFYKDWCAGRVELDGLELDSMLDSENGSRSEPVSFKHFLLTEL 262

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           FK GGR+   K+    + E+ VRKP + +TYNTLIDLYGKAGRLKDA+ VF+EMLKSGVA
Sbjct: 263 FKTGGRV---KIGGSSDEETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVA 319

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            DTITFNTMIFTCG+HG LSEAESLL KMEERRISPDT+TYNIFLSLYA+ GNI+AAL C
Sbjct: 320 MDTITFNTMIFTCGSHGLLSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINAALEC 379

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           Y KIR VGL PD V+HR ILHILC
Sbjct: 380 YWKIRNVGLVPDIVSHRTILHILC 403



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 30/111 (27%), Positives = 59/111 (53%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN ++  YGKA     A  +F  M   G  PD +T+N++I        + +A  LL +M+
Sbjct: 500 YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQ 559

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
           E    P   T++  ++ YA +G +  A+  Y+++ + G+ P+ V + ++++
Sbjct: 560 EAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLIN 610



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 46/200 (23%), Positives = 88/200 (44%)
 Frame = +2

Query: 5    NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
            N +++       +DK    FK         D +  +S+  M SG D +     L  E+ +
Sbjct: 501  NVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQE 560

Query: 185  AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
            AG                   KP+   T++ ++  Y + G+L DA  V+ EM+K+GV P+
Sbjct: 561  AGF------------------KPQ-CLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPN 601

Query: 365  TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
             + + ++I      G++ EA      MEE  I  +       + +Y+ +G  D A   Y+
Sbjct: 602  EVVYGSLINGFAEVGNVEEALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYK 661

Query: 545  KIREVGLFPDTVTHRAILHI 604
            K++++   PD +   +++ +
Sbjct: 662  KMKDLEGGPDIIASNSMISL 681


>ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Cucumis sativus]
          Length = 1020

 Score =  287 bits (735), Expect = 1e-75
 Identities = 143/204 (70%), Positives = 171/204 (83%), Gaps = 3/204 (1%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDS-VDD--MESGTDPISPKHFLSTE 175
           NTV+RVLKD GEFD  DKF+K+WC G VEL++ DL+S V+D  + S  +PI+PKHFL TE
Sbjct: 235 NTVVRVLKDAGEFDSADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFLLTE 294

Query: 176 LFKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGV 355
           LF+ G R+P  KVS    V++ VRKPR+ +TYNTLIDLYGKAGRLKDA+ VF EML +G+
Sbjct: 295 LFRIGTRIPNRKVSP--EVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGI 352

Query: 356 APDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALV 535
           + DTITFNTMI+TCG+HGHL+EAE+LL KMEER +SPDTKTYNIFLSLYAN GNID AL 
Sbjct: 353 SMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANNGNIDGALK 412

Query: 536 CYRKIREVGLFPDTVTHRAILHIL 607
           CYR+IREVGLFPD VTHRA+LH+L
Sbjct: 413 CYRRIREVGLFPDVVTHRALLHVL 436



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/111 (27%), Positives = 56/111 (50%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN +I  YGKA   + A L+F  M   G  PD  T+N++I        + EA  LL++M+
Sbjct: 534 YNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQ 593

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
                P  +T++  ++ YA +G +  A+  Y  +    + P+ + +  +++
Sbjct: 594 RMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVN 644


>ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g73710-like [Cucumis sativus]
          Length = 1026

 Score =  286 bits (731), Expect = 4e-75
 Identities = 142/204 (69%), Positives = 170/204 (83%), Gaps = 3/204 (1%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDS-VDD--MESGTDPISPKHFLSTE 175
           NTV+RVLKD GEFD  DKF+K+WC G VEL++ DL+S V+D  + S  +PI+PKHF  TE
Sbjct: 235 NTVVRVLKDAGEFDSADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFCXTE 294

Query: 176 LFKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGV 355
           LF+ G R+P  KVS    V++ VRKPR+ +TYNTLIDLYGKAGRLKDA+ VF EML +G+
Sbjct: 295 LFRIGTRIPNRKVSP--EVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGI 352

Query: 356 APDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALV 535
           + DTITFNTMI+TCG+HGHL+EAE+LL KMEER +SPDTKTYNIFLSLYAN GNID AL 
Sbjct: 353 SMDTITFNTMIYTCGSHGHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANDGNIDGALK 412

Query: 536 CYRKIREVGLFPDTVTHRAILHIL 607
           CYR+IREVGLFPD VTHRA+LH+L
Sbjct: 413 CYRRIREVGLFPDVVTHRALLHVL 436



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/111 (27%), Positives = 56/111 (50%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN +I  YGKA   + A L+F  M   G  PD  T+N++I        + EA  LL++M+
Sbjct: 534 YNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQ 593

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
                P  +T++  ++ YA +G +  A+  Y  +    + P+ + +  +++
Sbjct: 594 RMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVN 644


>ref|XP_006390515.1| hypothetical protein EUTSA_v10019624mg, partial [Eutrema
           salsugineum] gi|557086949|gb|ESQ27801.1| hypothetical
           protein EUTSA_v10019624mg, partial [Eutrema salsugineum]
          Length = 967

 Score =  275 bits (704), Expect = 6e-72
 Identities = 138/204 (67%), Positives = 164/204 (80%), Gaps = 3/204 (1%)
 Frame = +2

Query: 8   TVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDME---SGTDPISPKHFLSTEL 178
           TV+RV K+ G+FD+ D+FFK WC GRV LD+LDLDS+DD     S + P++ K FLS EL
Sbjct: 211 TVVRVFKNSGDFDRADRFFKGWCAGRVNLDDLDLDSIDDSPKNGSASSPVNLKQFLSMEL 270

Query: 179 FKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVA 358
           FK G R P  K S     +SS RKPR+ +T+NTLIDLYGKAGRL DA+ +F+EMLKSGV 
Sbjct: 271 FKVGARNPVEK-SLRYTSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVP 329

Query: 359 PDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVC 538
            DT+TFNTMI TCGTHGHLSEAESLL KMEE+ I+PDTKTYNI LSL+A+ G+I+AAL  
Sbjct: 330 IDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGINPDTKTYNILLSLHADAGDIEAALKY 389

Query: 539 YRKIREVGLFPDTVTHRAILHILC 610
           YRKIR+VGLFPDTVTHRA+LHILC
Sbjct: 390 YRKIRKVGLFPDTVTHRAVLHILC 413


>ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Capsella rubella]
           gi|565486079|ref|XP_006300679.1| hypothetical protein
           CARUB_v10019718mg [Capsella rubella]
           gi|482569388|gb|EOA33576.1| hypothetical protein
           CARUB_v10019718mg [Capsella rubella]
           gi|482569389|gb|EOA33577.1| hypothetical protein
           CARUB_v10019718mg [Capsella rubella]
          Length = 986

 Score =  275 bits (704), Expect = 6e-72
 Identities = 139/205 (67%), Positives = 163/205 (79%), Gaps = 4/205 (1%)
 Frame = +2

Query: 8   TVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDM---ESGTDPISPKHFLSTEL 178
           TV+RV K+ GEFD+ D+FFK WC G+V LD+LDLDS+DD     S   P++ K FLS EL
Sbjct: 217 TVVRVFKNSGEFDRADRFFKGWCAGKVNLDDLDLDSIDDFPKNSSARSPVNLKQFLSMEL 276

Query: 179 FKAGGRMPPSK-VSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGV 355
           FK G R P  K        +SS RKPR+ +T+NTLIDLYGKAGRL DA+ +F+EMLKSGV
Sbjct: 277 FKVGARNPIEKSFHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGV 336

Query: 356 APDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALV 535
           A DT+TFNTMI TCGTHGHLSEAESLL KMEE+ ISPDTKTYNI LSL+A+ G+I+AAL 
Sbjct: 337 AIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALN 396

Query: 536 CYRKIREVGLFPDTVTHRAILHILC 610
            YRKIR+VGLFPDTVTHRA+LHILC
Sbjct: 397 YYRKIRKVGLFPDTVTHRAVLHILC 421


>ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333341|gb|EFH63759.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 989

 Score =  272 bits (696), Expect = 5e-71
 Identities = 137/205 (66%), Positives = 162/205 (79%), Gaps = 4/205 (1%)
 Frame = +2

Query: 8   TVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDME---SGTDPISPKHFLSTEL 178
           TV+RV K+ GEFD+ D+FFK WC G+V LD+LDLDS+DD     S   P++ K FLS EL
Sbjct: 214 TVVRVFKNSGEFDRADRFFKGWCAGKVNLDDLDLDSIDDFPKNGSAQSPVNLKQFLSMEL 273

Query: 179 FKAGGRMPPSK-VSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGV 355
           FK G R P  K +      +SS RKPR+ +T+NTLIDLYGKAGRL DA+ +F+EMLKSGV
Sbjct: 274 FKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGV 333

Query: 356 APDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALV 535
             DT+TFNTMI TCGTHGHLSEAESLL KMEE+ ISPDTKTYNI LSL+A+ G+I+AAL 
Sbjct: 334 PIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALK 393

Query: 536 CYRKIREVGLFPDTVTHRAILHILC 610
            YR IR+VGLFPDTVTHRA+LHILC
Sbjct: 394 YYRNIRKVGLFPDTVTHRAVLHILC 418



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/111 (27%), Positives = 58/111 (52%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN +I  YGKA   + A  +F  M   G  PD  T+N++I        + +A+ +L++M 
Sbjct: 515 YNVMIKAYGKAKLHEKALSIFKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEML 574

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
           +    P  KTY   ++ Y  +G +  A+  Y  +++ G+ P+ V + ++++
Sbjct: 575 DSGCKPGCKTYAALIASYVRLGLLSDAVDLYEAMKKTGVKPNEVVYGSLIN 625


>ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like isoform X1 [Solanum tuberosum]
           gi|565382385|ref|XP_006357523.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g73710-like isoform X2 [Solanum tuberosum]
          Length = 1012

 Score =  269 bits (687), Expect = 5e-70
 Identities = 135/202 (66%), Positives = 159/202 (78%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
           NTV++VLKD GE+D+ D+F+K+WC G++ELD+ DLDS+DD E    P S K FL TELF+
Sbjct: 252 NTVVKVLKDAGEYDRADRFYKDWCTGKIELDDFDLDSIDDSE----PFSLKQFLLTELFR 307

Query: 185 AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
            GGR P    S  ++ E + RKP++ ATYNTLIDLYGKAGRLKDA+ VF EMLKSGVA D
Sbjct: 308 TGGRNP----SRVLDNEKTCRKPQMTATYNTLIDLYGKAGRLKDAANVFNEMLKSGVALD 363

Query: 365 TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
            +TFNTMIF CG+HG+L EAE+LL+KMEER ISPDTKTYNIFLSLYAN G ID AL  YR
Sbjct: 364 AVTFNTMIFICGSHGYLEEAEALLNKMEERGISPDTKTYNIFLSLYANAGKIDRALQWYR 423

Query: 545 KIREVGLFPDTVTHRAILHILC 610
           KIR  GLFPD VT RAI+  LC
Sbjct: 424 KIRRTGLFPDAVTCRAIIRTLC 445



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
 Frame = +2

Query: 41   FDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFKAGGRMPPSKVSS 220
            +DK    FK         D    +S+  M SG D +     L  E+   G R  PS  + 
Sbjct: 555  YDKAFSLFKGMKNQGTWPDECTYNSLIQMFSGGDLVDQAKELLAEM--QGLRFKPSCSTF 612

Query: 221  PVNVESSVRKPRIA------------------ATYNTLIDLYGKAGRLKDASLVFAEMLK 346
               + S VR  R++                    Y TLID + +AG+ ++A   F  M  
Sbjct: 613  SALIASYVRMNRLSDAVDVFDEMSEAGVKPNEVVYGTLIDGFAEAGKFEEAMHYFHVMND 672

Query: 347  SGVAPDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDA 526
            SG+  + I   +MI      G +  A+ L  +++     PD    N  L+LYA+ G +  
Sbjct: 673  SGIQANQIILTSMIKAYSKLGSVEGAKKLYEQIKNLHGGPDIIASNSMLNLYADFGMVSE 732

Query: 527  ALVCYRKIREVGLFPDTVTHRAILH 601
            A + +  +RE G   D VT   +++
Sbjct: 733  AKMIFNHLREKGQ-ADGVTFATLIY 756


>ref|XP_004490797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Cicer arietinum]
          Length = 1002

 Score =  267 bits (683), Expect = 2e-69
 Identities = 135/205 (65%), Positives = 166/205 (80%), Gaps = 3/205 (1%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTD---PISPKHFLSTE 175
           +TV++VLKDVGEFD+ D+F+KNWCVG+V+LD+LD DS     +G+    PIS K FLSTE
Sbjct: 213 STVVKVLKDVGEFDRADRFYKNWCVGKVDLDDLDFDSSTFDINGSRSPVPISFKQFLSTE 272

Query: 176 LFKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGV 355
           LFK GG    S     +  E++ +KPR++ TYNTLIDLYGKAGRLKDA+ +FA+M+KSGV
Sbjct: 273 LFKTGGGTQASNGMLSLERENAPQKPRLSTTYNTLIDLYGKAGRLKDAADIFADMMKSGV 332

Query: 356 APDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALV 535
           A DT TFNTMIF  G+HG+LSEAESLL+KMEE+ I P+T+TYNIFLSLYAN GNI+AAL 
Sbjct: 333 AVDTCTFNTMIFISGSHGNLSEAESLLAKMEEKGILPNTRTYNIFLSLYANAGNINAALS 392

Query: 536 CYRKIREVGLFPDTVTHRAILHILC 610
           CYR+IREVGLFPD VT+RA+L  LC
Sbjct: 393 CYRRIREVGLFPDVVTYRALLGALC 417



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 29/98 (29%), Positives = 52/98 (53%)
 Frame = +2

Query: 266 TYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKM 445
           T++ +I  Y + G+L DA  V+ EML++ V P+ + + ++I     HG L EA      M
Sbjct: 583 TFSAVIGCYARLGQLSDAVSVYQEMLRASVKPNEVVYGSLINGFAEHGSLDEALQYFHLM 642

Query: 446 EERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREV 559
           EE  +S +    +  L  Y  VGN++     Y +++++
Sbjct: 643 EESGLSANLVVLSTLLKSYCKVGNLEGVKSIYEQMQKM 680



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 29/111 (26%), Positives = 59/111 (53%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           +N LI  YGKA   + A  +F EM   G+ P+  T+N++I        + +A  L+ +M+
Sbjct: 514 FNVLIKAYGKAKLYEKAVFLFKEMQNQGIWPNDSTYNSIIQMLSGADLVDQARELVVEMQ 573

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
           E    P  +T++  +  YA +G +  A+  Y+++    + P+ V + ++++
Sbjct: 574 EMGFKPHCQTFSAVIGCYARLGQLSDAVSVYQEMLRASVKPNEVVYGSLIN 624


>ref|XP_004243803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Solanum lycopersicum]
          Length = 1014

 Score =  266 bits (679), Expect = 5e-69
 Identities = 133/202 (65%), Positives = 158/202 (78%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
           NTV++VLKD GE+D+ D+F+K+WC G++ELD+ DLDS+D+ E    P S K FL TELF+
Sbjct: 252 NTVVKVLKDAGEYDRADRFYKDWCTGKIELDDFDLDSIDNSE----PFSLKQFLLTELFR 307

Query: 185 AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
            GGR P    S  + +E + RKP++ ATYNTLIDLYGKAGRLKDA+ VF EMLKSGVA D
Sbjct: 308 TGGRNP----SRVLEMEKTCRKPQMTATYNTLIDLYGKAGRLKDAANVFNEMLKSGVALD 363

Query: 365 TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
            +TFNTMIF CG+HG+L EAE+LL+KMEER ISPDTKTYNIFLSLYAN   ID AL  YR
Sbjct: 364 AVTFNTMIFICGSHGYLEEAEALLNKMEERGISPDTKTYNIFLSLYANAAKIDRALQWYR 423

Query: 545 KIREVGLFPDTVTHRAILHILC 610
           KIR  GLFPD VT RAI+  LC
Sbjct: 424 KIRRTGLFPDAVTCRAIIRTLC 445



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
 Frame = +2

Query: 41   FDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFKAGGRMPPSKVSS 220
            +DK    FK         D    +S+  M  G D +     L  E+   G R  PS  + 
Sbjct: 555  YDKAFSLFKGMKSQGTWPDECTYNSLIQMFCGGDLVDQAKELLAEM--QGLRFKPSCSTF 612

Query: 221  PVNVESSVRKPRIA------------------ATYNTLIDLYGKAGRLKDASLVFAEMLK 346
               + S VR  R++                    Y TLID + +AG+ ++A   F  M  
Sbjct: 613  SALIASYVRMSRLSDAVDVFDEMSKAGVKPNEVVYGTLIDGFAEAGKFEEAMHYFRFMND 672

Query: 347  SGVAPDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDA 526
            SG+  + I   +MI      G +  A+ L  +M+     PD    N  L+LYA+ G +  
Sbjct: 673  SGIQANQIILTSMIKAYSKLGSVEGAKKLYEQMKNLHGGPDIIASNCMLNLYADFGMVSE 732

Query: 527  ALVCYRKIREVGLFPDTVTHRAILH 601
            A + +  +RE G   D VT   +++
Sbjct: 733  AKMLFNHLREKGQ-ADGVTFATLIY 756


>ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g73710 gi|12324197|gb|AAG52063.1|AC012679_1
           hypothetical protein; 49134-52109 [Arabidopsis thaliana]
           gi|332197379|gb|AEE35500.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 991

 Score =  265 bits (678), Expect = 6e-69
 Identities = 136/205 (66%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
 Frame = +2

Query: 8   TVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDME---SGTDPISPKHFLSTEL 178
           TV+RV K+ GEFD+ D+FFK WC G+V+LD   LDS+DD     S   P++ K FLS EL
Sbjct: 220 TVVRVFKNSGEFDRADRFFKGWCAGKVDLD---LDSIDDFPKNGSAQSPVNLKQFLSMEL 276

Query: 179 FKAGGRMPPSK-VSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGV 355
           FK G R P  K +      +SS RKPR+ +T+NTLIDLYGKAGRL DA+ +F+EMLKSGV
Sbjct: 277 FKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGV 336

Query: 356 APDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALV 535
             DT+TFNTMI TCGTHGHLSEAESLL KMEE+ ISPDTKTYNI LSL+A+ G+I+AAL 
Sbjct: 337 PIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALE 396

Query: 536 CYRKIREVGLFPDTVTHRAILHILC 610
            YRKIR+VGLFPDTVTHRA+LHILC
Sbjct: 397 YYRKIRKVGLFPDTVTHRAVLHILC 421



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/111 (27%), Positives = 56/111 (50%)
 Frame = +2

Query: 269 YNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEAESLLSKME 448
           YN +I  YGKA   + A  +F  M   G  PD  T+N++         + EA+ +L++M 
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577

Query: 449 ERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
           +    P  KTY   ++ Y  +G +  A+  Y  + + G+ P+ V + ++++
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628


>ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355517531|gb|AES99154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 981

 Score =  259 bits (663), Expect = 3e-67
 Identities = 135/206 (65%), Positives = 162/206 (78%), Gaps = 4/206 (1%)
 Frame = +2

Query: 5   NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVD----DMESGTDPISPKHFLST 172
           +TV++VLKDVGEFD+ D+F+KNWC G+V+LD+LD DS D    D    + PIS K FLST
Sbjct: 204 STVVKVLKDVGEFDRADRFYKNWCGGKVDLDDLDFDSSDCAIADGSRSSVPISFKQFLST 263

Query: 173 ELFKAGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSG 352
           ELFK GG +  S + S    E +  KPR++ TYNTLIDLYGKAGRLKDA+ VFA+M+KSG
Sbjct: 264 ELFKTGGGIRDSNMLSMDMEEIAPLKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSG 323

Query: 353 VAPDTITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAAL 532
           VA DT TFNT+IF  G+HG+L EAESLL KMEER IS +T+TYNIFLSLYA  G+IDAAL
Sbjct: 324 VAMDTCTFNTLIFISGSHGNLLEAESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAAL 383

Query: 533 VCYRKIREVGLFPDTVTHRAILHILC 610
             YR+IREVGLFPDTVT+RA+L  LC
Sbjct: 384 SYYRRIREVGLFPDTVTYRALLGALC 409



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/119 (26%), Positives = 62/119 (52%)
 Frame = +2

Query: 245 RKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPDTITFNTMIFTCGTHGHLSEA 424
           R+ R    +N +I  YGKA     A L+F EM   G++P   T+N++I        + +A
Sbjct: 495 RQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQA 554

Query: 425 ESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYRKIREVGLFPDTVTHRAILH 601
             L  +M+E    P  +T++  +  YA +G +  A++ Y+++   G+ P+   + A+++
Sbjct: 555 RDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALIN 613



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/185 (21%), Positives = 76/185 (41%)
 Frame = +2

Query: 5    NTVLRVLKDVGEFDKGDKFFKNWCVGRVELDNLDLDSVDDMESGTDPISPKHFLSTELFK 184
            N +++       +DK    F+      +   +   +S+  M SG D +     L+ E+ +
Sbjct: 504  NVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQE 563

Query: 185  AGGRMPPSKVSSPVNVESSVRKPRIAATYNTLIDLYGKAGRLKDASLVFAEMLKSGVAPD 364
             G                   KP    T++ +I  Y + G+L DA +V+ EM+ +GV P+
Sbjct: 564  MGF------------------KPH-CQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPN 604

Query: 365  TITFNTMIFTCGTHGHLSEAESLLSKMEERRISPDTKTYNIFLSLYANVGNIDAALVCYR 544
               +  +I     HG L EA      M+E  +S +       +  Y+  G++      Y+
Sbjct: 605  ETVYGALINGFAEHGRLDEALQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYK 664

Query: 545  KIREV 559
            +++ +
Sbjct: 665  QMQNM 669