BLASTX nr result
ID: Akebia24_contig00038683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00038683
(485 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 71 2e-15
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 68 2e-11
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 64 3e-10
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 9e-09
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 64 2e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 64 2e-08
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 63 3e-08
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 63 3e-08
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 61 1e-07
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 59 4e-07
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 59 5e-07
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 59 7e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 58 1e-06
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 58 2e-06
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 58 2e-06
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 58 2e-06
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 57 2e-06
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A... 53 2e-06
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 57 3e-06
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 56 5e-06
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 71.2 bits (173), Expect(2) = 2e-15
Identities = 42/127 (33%), Positives = 67/127 (52%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
+ KS + + LSF GR L +++LSS+ +YW+S +LPKKV K++ + F G
Sbjct: 618 RIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGR 677
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKT 362
+ + E K EGGLG+K+ WNKA + ++ + +N W DW+ +K +
Sbjct: 678 AATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNS 737
Query: 363 FWTM*CP 383
FW P
Sbjct: 738 FWNAPLP 744
Score = 36.2 bits (82), Expect(2) = 2e-15
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2
Query: 371 NVVSPSVASWLWRKILKAREDVVGPIRRIIGNGENTFL 484
N PS+ SW WRK+LK RE IIG+G T L
Sbjct: 740 NAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSL 777
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 68.2 bits (165), Expect(2) = 2e-11
Identities = 38/102 (37%), Positives = 53/102 (51%)
Frame = +3
Query: 30 LSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFGIE 209
LS+ GR L + +L SM YW F LPKK+ K V C+ F G + T
Sbjct: 793 LSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDF 852
Query: 210 SAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM 335
K GGL + N V+WNKAAI + L I+F+++ +W W+
Sbjct: 853 LQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWV 894
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 353 KQDFLDNVVSPSVASWLWRKILKARE 430
K+ ++NV S SW+ RKI ++RE
Sbjct: 900 KRQNIENVTVSSNTSWILRKIFESRE 925
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 63.9 bits (154), Expect(2) = 3e-10
Identities = 38/113 (33%), Positives = 56/113 (49%)
Frame = +3
Query: 30 LSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFGIE 209
LSF GR L +++ S +W S F+LPK K + +C F I I+
Sbjct: 797 LSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQN 856
Query: 210 SAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFW 368
S K EGGLGL+N WNK R + ++ RR+++W W N +++ FW
Sbjct: 857 SCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFW 909
Score = 26.2 bits (56), Expect(2) = 3e-10
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 371 NVVSPSVASWLWRKILKAREDVVGPIRRIIGNGE 472
N + S SW+W+ IL R +R +GNG+
Sbjct: 910 NAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQ 943
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 60.5 bits (145), Expect(2) = 9e-09
Identities = 36/117 (30%), Positives = 56/117 (47%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFG 203
+ LS+ GR L +++LSSM YW+ F L KKV + V +C+ F G
Sbjct: 788 KLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAW 847
Query: 204 IESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWTM 374
K GG + N WN+AA+ + L I F+R+ +W W+ +K + T+
Sbjct: 848 ATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTV 904
Score = 24.6 bits (52), Expect(2) = 9e-09
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 350 KKQDFLDNVVSPSVASWLWRKILKARE 430
K+QD L +S + +W+ RKI+KAR+
Sbjct: 897 KRQDILTVNIS-NQTTWILRKIVKARD 922
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/117 (31%), Positives = 62/117 (52%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFG 203
RFLSF GR L +++LSS+ +W S F LPK +E+ + F G +
Sbjct: 950 RFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAW 1009
Query: 204 IESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWTM 374
E K+EGGLGLK N+ ++ + + I R+++W W+ + ++ +TFW++
Sbjct: 1010 SEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSV 1066
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/115 (32%), Positives = 55/115 (47%)
Frame = +3
Query: 30 LSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFGIE 209
LSF GR L +++ +W S FLLPK K + LC F G I I+
Sbjct: 798 LSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAA 857
Query: 210 SAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWTM 374
K EGGLGL+ + WNK R + + ++++WADW + + +FW +
Sbjct: 858 LCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAV 912
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 62.8 bits (151), Expect(2) = 3e-08
Identities = 35/113 (30%), Positives = 58/113 (51%)
Frame = +3
Query: 30 LSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFGIE 209
LSF GR L +++ + +W S FLLPK K++ LC F G I + + ++
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717
Query: 210 SAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFW 368
K EGGLG ++ WNK + R + ++ R ++WA W + + + +FW
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFW 770
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 398 WLWRKILKAREDVVGPIRRIIGNG 469
W W+ +L R I+ +GNG
Sbjct: 780 WTWKMLLNLRPLAEKFIKAKVGNG 803
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 62.8 bits (151), Expect(2) = 3e-08
Identities = 35/113 (30%), Positives = 58/113 (51%)
Frame = +3
Query: 30 LSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFGIE 209
LSF GR L +++ + +W S FLLPK K++ LC F G I + + ++
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717
Query: 210 SAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFW 368
K EGGLG ++ WNK + R + ++ R ++WA W + + + +FW
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFW 770
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 398 WLWRKILKAREDVVGPIRRIIGNG 469
W W+ +L R I+ +GNG
Sbjct: 780 WTWKMLLNLRPLAEKFIKAKVGNG 803
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQ-SF 200
RF SF GRF L +++L S+ +W + F LP++ +E+ LC F G + + S+
Sbjct: 450 RFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISW 509
Query: 201 GIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWTM 374
I P K EGGLGL+N N + + + I N++W W+ + ++ K+ W++
Sbjct: 510 DIVCKP-KAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSL 566
>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Cucumis sativus]
Length = 647
Score = 58.9 bits (141), Expect(2) = 4e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
+ +S R LSF L R +L S+ +YW+S F+LP KV K+V + + + +G
Sbjct: 248 RIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGR 307
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKT 362
+ E EGGL + + WNKA+ + L L+ + ++W W+ +K ++
Sbjct: 308 GGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRS 367
Query: 363 FW 368
W
Sbjct: 368 LW 369
Score = 20.8 bits (42), Expect(2) = 4e-07
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 395 SWLWRKILKAREDVVGPIRRIIGN 466
SW +R IL+ R+ + + +GN
Sbjct: 378 SWCFRAILRKRDILKAHVEMKLGN 401
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/117 (28%), Positives = 58/117 (49%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFG 203
R+LSF GR L ++L S +W S F LP KE+ +C F G +
Sbjct: 208 RYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSW 267
Query: 204 IESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWTM 374
+ K+EGGLGL++ N ++ + + ++ +++W W N +K ++FW++
Sbjct: 268 DDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL 324
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/111 (29%), Positives = 58/111 (52%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
+ +S R LSF GR L R++L S+ +YW+S F+LP KV ++V + + + +G
Sbjct: 63 RIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGR 122
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM 335
+ E EGGL +++ WN A+ + L L+ + ++W W+
Sbjct: 123 GGAKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKILWLLLVKSGSLWVAWV 173
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/116 (29%), Positives = 58/116 (50%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFG 203
RFLS+ GR L ++L S+ +W S F LP++ +E+ LC F G + + +
Sbjct: 321 RFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAW 380
Query: 204 IESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWT 371
K+EGGLGL++ N + + I + +++W W+ +K TFW+
Sbjct: 381 ETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWS 436
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/123 (26%), Positives = 60/123 (48%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
K S R LS+ GR L +++ S+ +W S + LP KE+ LC F G
Sbjct: 369 KISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNP 428
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKT 362
+ K+EGGLG+K+ + NK + + + + R++++W +W+ ++ +
Sbjct: 429 KKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGS 488
Query: 363 FWT 371
FW+
Sbjct: 489 FWS 491
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*-I*TLSTIQSF 200
R+LS+ GR L ++L S+ +W + F LP++ +E+ +C F G + T +
Sbjct: 330 RYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCW 389
Query: 201 GIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFWTM 374
G P K+EGGLGL++ N+ + + + I N++W W+ +K+ TFW++
Sbjct: 390 GDVCKP-KQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSV 446
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/123 (26%), Positives = 60/123 (48%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
K S R LS+ GR L +++ S+ +W S + LP KE+ LC F G
Sbjct: 938 KISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNP 997
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKT 362
+ K+EGGLG+K+ + NK + + + + R++++W +W+ ++ +
Sbjct: 998 KKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGS 1057
Query: 363 FWT 371
FW+
Sbjct: 1058 FWS 1060
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/115 (30%), Positives = 54/115 (46%)
Frame = +3
Query: 24 RFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFG 203
RFLSF GRF L +++ S +W S F LP+ +E+ LC F G +
Sbjct: 356 RFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISW 415
Query: 204 IESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFW 368
+ K EGGLGL++ N + + I +++W W+ N +K + FW
Sbjct: 416 NQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFW 470
>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 265
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 30/110 (27%), Positives = 57/110 (51%)
Frame = +3
Query: 39 VGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TLSTIQSFGIESAP 218
VGR L ++L S+ +YW+S F+LP KV ++V + + ++ +G + E
Sbjct: 78 VGRLQLVCSVLRSLQVYWASVFMLPMKVHRDVNKILRSYFWRGKEEGRGGDKVAWDEVCL 137
Query: 219 QKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKTFW 368
EGGL +++ WN A+ + L L+ + ++W W+ +K ++ W
Sbjct: 138 PFDEGGLVIRDRSSWNIASTLKILWLLLVKSGSLWVAWVEAYILKGRSLW 187
Score = 24.3 bits (51), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 395 SWLWRKILKAREDVVGPIRRIIGNGE 472
SW +R IL+ RE + + +GNG+
Sbjct: 196 SWCFRAILRKREILEAHVNIEVGNGK 221
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/124 (29%), Positives = 57/124 (45%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
K S R+LS+ GR L ++L S +W S F LP+ KE+ LC F G
Sbjct: 213 KIGSWTARYLSYAGRLSLITSVLWSTCNFWLSAFRLPRGCIKEIEKLCSAFLWSGPDLNP 272
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKT 362
+ ++ K+EGGLGL+ N + + + N++W W+ +K T
Sbjct: 273 HKAKLSWVDVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADT 332
Query: 363 FWTM 374
FW++
Sbjct: 333 FWSV 336
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 56.2 bits (134), Expect = 5e-06
Identities = 33/123 (26%), Positives = 57/123 (46%)
Frame = +3
Query: 3 KTKS*KVRFLSFVGRF*LARAMLSSMHIYWSSCFLLPKKVTKEVG*LCQGFYDQG*I*TL 182
K S R LS+ GR L +++ S+ +W S + LP +E+ LC F G +
Sbjct: 1093 KISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNP 1152
Query: 183 STIQSFGIESAPQKKEGGLGLKNTVIWNKAAIRRNLCLISFRRNNVWADWM*DN*VKNKT 362
+ KKEGGLG+K+ NK + + + + + ++W W+ ++ T
Sbjct: 1153 KKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGT 1212
Query: 363 FWT 371
FW+
Sbjct: 1213 FWS 1215