BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00038535
         (428 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...    89   5e-16
ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citr...    82   8e-14
ref|XP_006348098.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
gb|AFK47126.1| unknown [Medicago truncatula]                           79   5e-13
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...    79   5e-13
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_004503475.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
ref|XP_004307867.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_002889127.1| pentatricopeptide repeat-containing protein ...    67   3e-09
gb|EYU30720.1| hypothetical protein MIMGU_mgv1a026030mg [Mimulus...    67   3e-09
ref|NP_177842.1| pentatricopeptide repeat-containing protein [Ar...    63   5e-08
ref|XP_007160298.1| hypothetical protein PHAVU_002G309900g [Phas...    62   8e-08
ref|XP_006300895.1| hypothetical protein CARUB_v10021262mg [Caps...    56   6e-06

>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 58/127 (45%), Positives = 72/127 (56%)
 Frame = +2

Query: 44  MISFHHLFVKVSVRTKRSNCLSLMVTQHLTHKLNLHFEAQRSTSTHYPPHITLSDSDQNP 223
           M S HHLF+ +  R K S   +L ++ HL H L   F A     T  PP   L  S Q+ 
Sbjct: 1   MNSLHHLFL-LGFR-KSSTFKNLTISCHLNHSLAF-FSASSDAQT--PP---LPQSAQDI 52

Query: 224 AQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFPCMALHVFV 403
           A+   T  S CT L DLNQIYAHII + +L    + FHWNNIIRSY   + P  AL V++
Sbjct: 53  AKWAATQSSNCTTLRDLNQIYAHIICSDLLHFYSAPFHWNNIIRSYTRLDAPVKALQVYI 112

Query: 404 SMWQAGV 424
           SM +AGV
Sbjct: 113 SMSRAGV 119


>ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Citrus sinensis]
          Length = 471

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 7/94 (7%)
 Frame = +2

Query: 164 RSTSTH-YPPHITLS------DSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELR 322
           R   TH +  H+T+S      D+ ++PA+I+ T LSKCTNL  LNQIYAHII+T +L   
Sbjct: 24  RLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY 83

Query: 323 PSAFHWNNIIRSYVSFNFPCMALHVFVSMWQAGV 424
            +AFHWNNIIR Y     P  AL +++ M +AGV
Sbjct: 84  SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 54/132 (40%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
 Frame = +2

Query: 44  MISFHHLFVKVS-VRTKRSNCLSLMVTQHL---THKLNLHFEAQRSTSTHYPPHITLSDS 211
           M SF    +++S V+  +   +S  +  +L   TH ++  F  Q    T +PP     D 
Sbjct: 1   MTSFQPPLLRLSIVQIPKPQTISRHLCNYLATTTHSVDAQFNFQ---PTAHPPS---PDP 54

Query: 212 DQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFPCMAL 391
            Q+ AQ I +HLSKC NL +LNQ+ AHII+T  LEL P+ F WNNIIRSY        AL
Sbjct: 55  IQDTAQTIASHLSKCANLIELNQLLAHIIRTHFLELYPAPFQWNNIIRSYTRLEAHHYAL 114

Query: 392 HVFVSMWQAGVS 427
            ++++M +AGVS
Sbjct: 115 SIYIAMSRAGVS 126


>ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citrus clementina]
           gi|557554491|gb|ESR64505.1| hypothetical protein
           CICLE_v10008215mg [Citrus clementina]
          Length = 461

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = +2

Query: 218 NPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFPCMALHV 397
           +PA+I+ T LSKCTNL  LNQIYAHII+T +L    +AFHWNNIIR Y     P  AL +
Sbjct: 39  HPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDI 98

Query: 398 FVSMWQAGV 424
           ++ M +AGV
Sbjct: 99  YIFMSRAGV 107


>ref|XP_006348098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Solanum tuberosum]
          Length = 456

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
 Frame = +2

Query: 134 HKLNLHFEAQRSTSTHYPPHITLSDS--DQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTC 307
           H L L F   R  S H    +  + +  D N  +II T +S C NL  L+QIY+ II+  
Sbjct: 5   HYLLLRFGRNRVNSFHLSHSLATATNILDSND-KIIATRISNCNNLHHLDQIYSQIIRNH 63

Query: 308 ILELRPSAFHWNNIIRSYVSFNFPCMALHVFVSMWQAGV 424
            LEL P  FHWNNIIRSY   N P  ALHV+++M + GV
Sbjct: 64  FLELYPVQFHWNNIIRSYTRLNSPSNALHVYITMSRTGV 102


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/80 (51%), Positives = 51/80 (63%)
 Frame = +2

Query: 185 PPHITLSDSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYV 364
           P H   S +D  P  +I T LS  T + DLNQIYAHI+ T  LE  P++F+WNNIIRSY 
Sbjct: 16  PQHSITSGND--PVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYT 73

Query: 365 SFNFPCMALHVFVSMWQAGV 424
               P  AL ++VSM +AGV
Sbjct: 74  RLESPQNALRIYVSMLRAGV 93


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/80 (51%), Positives = 51/80 (63%)
 Frame = +2

Query: 185 PPHITLSDSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYV 364
           P H   S +D  P  +I T LS  T + DLNQIYAHI+ T  LE  P++F+WNNIIRSY 
Sbjct: 16  PQHSITSGND--PVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYT 73

Query: 365 SFNFPCMALHVFVSMWQAGV 424
               P  AL ++VSM +AGV
Sbjct: 74  RLESPQNALRIYVSMLRAGV 93


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/90 (42%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = +2

Query: 158 AQRSTSTHYPPHITLSD-SDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAF 334
           A+R+  T  P  +T +  ++ + A+I+ T L  CTN+ +L QI+AH+++T +LE  PS+F
Sbjct: 171 AERNAVTETPFWLTYTSYNNVDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSF 230

Query: 335 HWNNIIRSYVSFNFPCMALHVFVSMWQAGV 424
           +WN IIRSY     P +AL V+++M QAG+
Sbjct: 231 YWNIIIRSYTRLEVPRIALFVYIAMLQAGI 260


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = +2

Query: 158 AQRSTSTHYPPHITLSD-SDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAF 334
           A+R+  T  P  +T +  ++ + A+I+ T L  CTN+ +L QI+AH+++T +LE  PS+F
Sbjct: 166 AERNAVTETPFWLTYTSYNNMDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSF 225

Query: 335 HWNNIIRSYVSFNFPCMALHVFVSMWQAGV 424
           +WN IIRSY     P +AL V++ M +AG+
Sbjct: 226 YWNIIIRSYTRLEVPRIALFVYIDMLRAGI 255


>ref|XP_004503475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cicer arietinum]
          Length = 451

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 38/85 (44%), Positives = 52/85 (61%)
 Frame = +2

Query: 170 TSTHYPPHITLSDSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNI 349
           T+    P IT   S  +P  +I T LS  T + +LNQ+YAH+++T  LE  P++F+WNNI
Sbjct: 16  TANTTQPSIT---SGNDPVTVITTLLSNSTRIHELNQVYAHLLRTRFLESNPASFNWNNI 72

Query: 350 IRSYVSFNFPCMALHVFVSMWQAGV 424
           IR+Y     P  AL V V M +AGV
Sbjct: 73  IRAYTRLEAPLNALRVHVLMLRAGV 97


>ref|XP_004307867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Fragaria vesca subsp. vesca]
          Length = 468

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/85 (42%), Positives = 54/85 (63%)
 Frame = +2

Query: 170 TSTHYPPHITLSDSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNI 349
           T+T   P++  S S  +P + +   LS C+ +S L+QIY  +I+T  L L P+ FHWNN+
Sbjct: 31  TTTSTTPNVE-SPSTPDP-ETLAIQLSNCSCVSQLDQIYCRVIRTQFLHLYPAPFHWNNL 88

Query: 350 IRSYVSFNFPCMALHVFVSMWQAGV 424
           IRSY   + P  +L V+V+M +AGV
Sbjct: 89  IRSYTRRDAPTESLFVYVAMSRAGV 113


>ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334968|gb|EFH65386.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 466

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/113 (36%), Positives = 68/113 (60%)
 Frame = +2

Query: 86  TKRSNCLSLMVTQHLTHKLNLHFEAQRSTSTHYPPHITLSDSDQNPAQIIGTHLSKCTNL 265
           TKR+N L +       H+LN HF    S+S+      +LS  D+N  +++ T LS CT+L
Sbjct: 13  TKRTNHLKIF------HRLN-HFVTISSSSSI----TSLSPQDRN--KLLATLLSNCTSL 59

Query: 266 SDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFPCMALHVFVSMWQAGV 424
           + + +I+  I ++CIL+  P AF WNNI+RSY+  + P  ++ V++ M ++ V
Sbjct: 60  ARVRRIHGDIFRSCILDQYPIAFLWNNIMRSYIRHDSPLDSVQVYLGMVRSNV 112


>gb|EYU30720.1| hypothetical protein MIMGU_mgv1a026030mg [Mimulus guttatus]
          Length = 435

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = +2

Query: 233 IGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFPCMALHVFVSMW 412
           I   +S C NL+ L Q++A +I+T  L+  P +FH+NNI R Y   N P  ALHV+++M 
Sbjct: 22  IALQVSNCANLNQLRQLFARVIRTHFLQFYPDSFHYNNISRIYTRLNSPTEALHVYIAMC 81

Query: 413 QAGV 424
           +AGV
Sbjct: 82  RAGV 85


>ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77170 gi|332197823|gb|AEE35944.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 467

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +2

Query: 53  FHHLFVKVSVR-TKRSNCLSLMVTQHLTHKLNLHFEAQRSTSTHYPPHITLSDSDQNPAQ 229
           F  L  K+ V  TKR+N  ++       H+LN HF    S+S        LS  D+N  +
Sbjct: 3   FSGLISKLHVHGTKRTNHFTIF------HRLN-HFVTTSSSSV-----TPLSPQDRN--K 48

Query: 230 IIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFPCMALHVFVSM 409
           ++ T LS CT+L+ + +I+  I ++ IL+  P AF WNNI+RSY+    P  A+ V++ M
Sbjct: 49  LLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGM 108

Query: 410 WQAGV 424
            ++ V
Sbjct: 109 VRSTV 113


>ref|XP_007160298.1| hypothetical protein PHAVU_002G309900g [Phaseolus vulgaris]
           gi|561033713|gb|ESW32292.1| hypothetical protein
           PHAVU_002G309900g [Phaseolus vulgaris]
          Length = 423

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/75 (37%), Positives = 42/75 (56%)
 Frame = +2

Query: 200 LSDSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNFP 379
           L  S  +   ++  HL  C  + +LN++YAH+++T      P+ F+WNNIIRSY     P
Sbjct: 29  LDYSGSDLVALVAAHLCNCATVRELNRVYAHVLRTHFFISNPAPFNWNNIIRSYTRLEAP 88

Query: 380 CMALHVFVSMWQAGV 424
             AL + V M + GV
Sbjct: 89  RNALRIHVLMLRNGV 103


>ref|XP_006300895.1| hypothetical protein CARUB_v10021262mg [Capsella rubella]
           gi|482569605|gb|EOA33793.1| hypothetical protein
           CARUB_v10021262mg [Capsella rubella]
          Length = 464

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/76 (36%), Positives = 49/76 (64%)
 Frame = +2

Query: 197 TLSDSDQNPAQIIGTHLSKCTNLSDLNQIYAHIIKTCILELRPSAFHWNNIIRSYVSFNF 376
           +LS  D+N  +++ T LS CT+L+ + +I+  I ++ IL+  P  F WNNI+RSY+  + 
Sbjct: 37  SLSPQDRN--KLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIPFLWNNIMRSYIRHDS 94

Query: 377 PCMALHVFVSMWQAGV 424
           P  A+ V++ M ++ V
Sbjct: 95  PLDAVQVYLDMVRSNV 110