BLASTX nr result

ID: Akebia24_contig00037941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00037941
         (287 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306098.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_007156911.1| hypothetical protein PHAVU_002G027600g [Phas...    55   8e-06

>ref|XP_004306098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Fragaria vesca subsp. vesca]
          Length = 673

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = -2

Query: 163 CSNATQARHLFDKLPQRSSPVYNVMIRSYIYYNQPEQALQLFIEMLTSGLHRPD 2
           CS+   AR LFD++P R   +YN +IR Y+    P +A+ +F++ML SG  RPD
Sbjct: 66  CSHLQYARKLFDEMPDRKPFLYNALIRMYVKNGLPREAMHVFVQMLASGTCRPD 119


>ref|XP_007156911.1| hypothetical protein PHAVU_002G027600g [Phaseolus vulgaris]
           gi|561030326|gb|ESW28905.1| hypothetical protein
           PHAVU_002G027600g [Phaseolus vulgaris]
          Length = 667

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = -2

Query: 163 CSNATQARHLFDKLPQRSSPVYNVMIRSYIYYNQPEQALQLFIEMLTSGLHRPD 2
           C +A+ A HLF+KLPQ S   +N M+R Y+   +P  AL LF+EML SG   PD
Sbjct: 59  CHHASYASHLFNKLPQPSLFSWNAMMRMYVQIGRPLDALNLFVEMLDSGQTLPD 112


Top