BLASTX nr result

ID: Akebia24_contig00037662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00037662
         (201 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    57   2e-06
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = -3

Query: 184 WRVTPFAISWEIWKERNRRCFENKGVDISKVSLLILLCIFFWCK 53
           WR+ P  I W IWKERN+RCFE K  +I K+    L   +FWCK
Sbjct: 157 WRIVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCLGLYYFWCK 200


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = -3

Query: 184 WRVTPFAISWEIWKERNRRCFENKGVDISKVSLLILLCIFFWCK 53
           WR+ P  I W +WKERN RCF+N+   I KV    ++ + FWCK
Sbjct: 457 WRLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIVSLLFWCK 500


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Solanum tuberosum]
          Length = 284

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = -3

Query: 184 WRVTPFAISWEIWKERNRRCFENKGVDISKVSLLILLCIFFWCK 53
           WR+ P  I W +WKERN RCF+N+   I KV    ++ + FWCK
Sbjct: 224 WRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFWCK 267


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