BLASTX nr result
ID: Akebia24_contig00037513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00037513
(309 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG44351.1|AF233037_1 reverse transcriptase-like protein [Spi... 51 5e-09
emb|CAN73196.1| hypothetical protein VITISV_028271 [Vitis vinifera] 48 4e-08
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] 46 1e-07
emb|CAN69836.1| hypothetical protein VITISV_026000 [Vitis vinifera] 46 1e-07
emb|CAN80367.1| hypothetical protein VITISV_014719 [Vitis vinifera] 43 3e-07
gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposo... 40 6e-07
emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera] 46 1e-06
gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposo... 39 1e-06
emb|CAN69168.1| hypothetical protein VITISV_015591 [Vitis vinifera] 44 1e-06
emb|CAN71207.1| hypothetical protein VITISV_030632 [Vitis vinifera] 43 2e-06
emb|CAN62192.1| hypothetical protein VITISV_023983 [Vitis vinifera] 44 2e-06
emb|CAN69185.1| hypothetical protein VITISV_004342 [Vitis vinifera] 44 4e-06
emb|CAN83904.1| hypothetical protein VITISV_017468 [Vitis vinifera] 40 8e-06
>gb|AAG44351.1|AF233037_1 reverse transcriptase-like protein [Spiranthes sinensis]
Length = 96
Score = 50.8 bits (120), Expect(2) = 5e-09
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F V++ F+R H+DHTCFVR +DGR I+L YVDD+
Sbjct: 56 FGTVVIQNGFTRVHADHTCFVRNSVDGRRAILLFYVDDM 94
Score = 35.4 bits (80), Expect(2) = 5e-09
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RF 196
R+ KSLYGLKQSP AWF RF
Sbjct: 37 RLKKSLYGLKQSPRAWFERF 56
>emb|CAN73196.1| hypothetical protein VITISV_028271 [Vitis vinifera]
Length = 563
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KVI + E+ + SDHT F Q DGR TI++VYVDDI
Sbjct: 187 FAKVIKNQEYQQGQSDHTMFFTQSNDGRMTILIVYVDDI 225
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ KSLYGLKQSP AWF RF ++
Sbjct: 168 KLKKSLYGLKQSPKAWFDRFAKV 190
>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
Length = 1493
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KVI + + + SDHT F +Q DGR TI++VYVDDI
Sbjct: 1144 FAKVIKNQGYQQGQSDHTMFFKQSNDGRMTILIVYVDDI 1182
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ KSLYGLKQSP AWF RF ++
Sbjct: 1125 KLKKSLYGLKQSPRAWFDRFAKV 1147
>emb|CAN69836.1| hypothetical protein VITISV_026000 [Vitis vinifera]
Length = 1263
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KVI + + + SDHT F +Q DGR TI++VYVDDI
Sbjct: 932 FAKVIKNQGYQQGQSDHTMFFKQSNDGRITILIVYVDDI 970
Score = 35.0 bits (79), Expect(2) = 1e-07
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ KSLYGLKQSP AWF RF ++
Sbjct: 913 KLKKSLYGLKQSPRAWFDRFAKV 935
>emb|CAN80367.1| hypothetical protein VITISV_014719 [Vitis vinifera]
Length = 1573
Score = 43.1 bits (100), Expect(2) = 3e-07
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
FS+V+ +S+ H+DHT F + +DG+ I++VY+DDI
Sbjct: 1355 FSQVLRRHGYSQGHADHTMFYKHSVDGKIVILIVYIDDI 1393
Score = 36.6 bits (83), Expect(2) = 3e-07
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 128 KDYRILKSLYGLKQSP*AWF*RF 196
K Y++ KS+YGLKQSP AWF RF
Sbjct: 1333 KVYKLNKSIYGLKQSPRAWFGRF 1355
>gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1609
Score = 40.0 bits (92), Expect(2) = 6e-07
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
FS+ + F +C +DHT FV++ L I++VYVDDI
Sbjct: 401 FSRSVKEQGFIQCQADHTLFVKRSLKNILAILIVYVDDI 439
Score = 38.9 bits (89), Expect(2) = 6e-07
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLR 202
R+LKSLYGLKQSP AWF RF R
Sbjct: 382 RLLKSLYGLKQSPRAWFGRFSR 403
>emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]
Length = 1210
Score = 46.2 bits (108), Expect(2) = 1e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KVI + + + SDHT F +Q DGR TI++VYVDDI
Sbjct: 894 FAKVIKNQGYQQGQSDHTMFFKQSNDGRMTILIVYVDDI 932
Score = 32.0 bits (71), Expect(2) = 1e-06
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ KSLYGLKQS AWF RF ++
Sbjct: 875 KLKKSLYGLKQSSRAWFDRFAKV 897
>gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1854
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLR 202
R+LKSLYGLKQSP AWF RF R
Sbjct: 581 RLLKSLYGLKQSPQAWFGRFSR 602
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
FS+ + F +C +DHT FV++ L R I++VYVDDI
Sbjct: 600 FSRSVKEQGFIQCQADHTLFVKRSLKNR-AILIVYVDDI 637
>emb|CAN69168.1| hypothetical protein VITISV_015591 [Vitis vinifera]
Length = 393
Score = 44.3 bits (103), Expect(2) = 1e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KVI + + + SDHT F +Q +GR TI++VYVDDI
Sbjct: 118 FAKVIKNQGYQQGQSDHTMFFKQSNNGRMTILIVYVDDI 156
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ KSLYGLKQSP WF RF ++
Sbjct: 99 KLKKSLYGLKQSPRVWFDRFAKV 121
>emb|CAN71207.1| hypothetical protein VITISV_030632 [Vitis vinifera]
Length = 902
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F KVI + + SDHT F +Q DGR TI++VYVD+I
Sbjct: 704 FEKVIKKQGYRQGQSDHTMFFKQSNDGRMTILIVYVDNI 742
Score = 34.3 bits (77), Expect(2) = 2e-06
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RF 196
++ KSLYGLKQSP AWF RF
Sbjct: 685 KLKKSLYGLKQSPRAWFDRF 704
>emb|CAN62192.1| hypothetical protein VITISV_023983 [Vitis vinifera]
Length = 590
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KV+ +S+C +DHT FV+ G+ +++VYVDDI
Sbjct: 239 FTKVVKKHRYSQCQTDHTLFVKHSPVGKLVVLIVYVDDI 277
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ +SLYGLKQSP AWF RF ++
Sbjct: 220 KLRRSLYGLKQSPRAWFERFTKV 242
>emb|CAN69185.1| hypothetical protein VITISV_004342 [Vitis vinifera]
Length = 315
Score = 43.9 bits (102), Expect(2) = 4e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KVI + + + S+HT F +Q DGR TI++VYVDDI
Sbjct: 134 FAKVIKNQGYEQEQSNHTMFFKQSNDGRMTILIVYVDDI 172
Score = 32.3 bits (72), Expect(2) = 4e-06
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 137 RILKSLYGLKQSP*AWF*RFLRL 205
++ KSLY LKQSP AWF RF ++
Sbjct: 115 KLKKSLYDLKQSPRAWFDRFAKV 137
>emb|CAN83904.1| hypothetical protein VITISV_017468 [Vitis vinifera]
Length = 271
Score = 40.0 bits (92), Expect(2) = 8e-06
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 193 FSKVILSMEFSRCHSDHTCFVRQGLDGRCTIVLVYVDDI 309
F+KV+ E+ + DHT F++ + G T +LVYVDDI
Sbjct: 219 FAKVMKEFEYKQSQGDHTFFIKHSVVGGVTTLLVYVDDI 257
Score = 35.0 bits (79), Expect(2) = 8e-06
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 128 KDYRILKSLYGLKQSP*AWF*RFLRL 205
K Y++ K+LYGLKQ P AWF RF ++
Sbjct: 197 KVYKLKKTLYGLKQFPRAWFGRFAKV 222