BLASTX nr result

ID: Akebia24_contig00037345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00037345
         (375 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006373773.1| hypothetical protein POPTR_0016s05270g [Popu...    57   3e-06
ref|XP_006373774.1| hypothetical protein POPTR_0016s05280g [Popu...    56   4e-06
ref|XP_002308971.1| hypothetical protein POPTR_0006s05460g [Popu...    56   6e-06

>ref|XP_006373773.1| hypothetical protein POPTR_0016s05270g [Populus trichocarpa]
           gi|550320885|gb|ERP51570.1| hypothetical protein
           POPTR_0016s05270g [Populus trichocarpa]
          Length = 67

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -1

Query: 348 MTQVSINKAVLFFFVIAIFTVVSVSAQYGEMAQSPAPSMDNGYGFALPISGVVV 187
           M Q SI KA++   VIA F   +VSAQ  EMA +PAP MD G GF+LP+SG +V
Sbjct: 1   MAQFSIPKALVLMLVIATFAA-AVSAQDSEMAPAPAPGMDAGAGFSLPVSGAIV 53


>ref|XP_006373774.1| hypothetical protein POPTR_0016s05280g [Populus trichocarpa]
           gi|550320886|gb|ERP51571.1| hypothetical protein
           POPTR_0016s05280g [Populus trichocarpa]
          Length = 67

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/52 (57%), Positives = 37/52 (71%)
 Frame = -1

Query: 342 QVSINKAVLFFFVIAIFTVVSVSAQYGEMAQSPAPSMDNGYGFALPISGVVV 187
           QV+I+KA  FF ++AI     VSAQ  EMA +PAP MD G GF+LP+SG VV
Sbjct: 4   QVTISKA--FFLLLAIAAFAVVSAQESEMAPAPAPGMDAGAGFSLPVSGAVV 53


>ref|XP_002308971.1| hypothetical protein POPTR_0006s05460g [Populus trichocarpa]
           gi|222854947|gb|EEE92494.1| hypothetical protein
           POPTR_0006s05460g [Populus trichocarpa]
          Length = 66

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/55 (54%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = -1

Query: 348 MTQVSINKAVLFFFVIAIFTVV-SVSAQYGEMAQSPAPSMDNGYGFALPISGVVV 187
           M +VS++KAVLF F++A+ +V  SVSAQ   +A +PAPSM+ G GF+LP  GV+V
Sbjct: 1   MAKVSVSKAVLFTFIVAMLSVAASVSAQ---LAPAPAPSMNTGTGFSLPAPGVIV 52


Top