BLASTX nr result

ID: Akebia24_contig00036879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00036879
         (397 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]       52   3e-09
emb|CAN76289.1| hypothetical protein VITISV_007641 [Vitis vinifera]    40   2e-06
emb|CAN76071.1| hypothetical protein VITISV_004551 [Vitis vinifera]    44   4e-06

>gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]
          Length = 168

 Score = 52.4 bits (124), Expect(2) = 3e-09
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = +1

Query: 31  IDSVLICNECINARFSLGIPRIICKTDMDKAYEYVN 138
           +DSVLI NEC+++R   GIP +ICK D++KAY++VN
Sbjct: 44  LDSVLIANECLDSRIKSGIPGLICKLDIEKAYDHVN 79



 Score = 34.7 bits (78), Expect(2) = 3e-09
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +2

Query: 221 IVN*NPKGFFRISSEFKQ*DPLSPFLFNIIV 313
           IVN +P GFF  S   +Q DPLSP LF +I+
Sbjct: 112 IVNGSPTGFFDSSRGLRQGDPLSPLLFLVIM 142


>emb|CAN76289.1| hypothetical protein VITISV_007641 [Vitis vinifera]
          Length = 558

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 14/36 (38%), Positives = 27/36 (75%)
 Frame = +1

Query: 31  IDSVLICNECINARFSLGIPRIICKTDMDKAYEYVN 138
           +D++LI NE +N+R    +  ++CK D++KAY++V+
Sbjct: 215 LDAILIANEAVNSRLKDNVGGVLCKLDIEKAYDHVS 250



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +2

Query: 221 IVN*NPKGFFRISSEFKQ*DPLSPFLFNIIV 313
           ++N +P GFF+ S   +Q DPLSP+LF I++
Sbjct: 283 LINDSPSGFFQSSRGLRQGDPLSPYLFVIVI 313


>emb|CAN76071.1| hypothetical protein VITISV_004551 [Vitis vinifera]
          Length = 1367

 Score = 44.3 bits (103), Expect(2) = 4e-06
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +1

Query: 31   IDSVLICNECINARFSLGIPRIICKTDMDKAYEYVN 138
            +D VLI NE +++R   G  RIICK D++KAY++VN
Sbjct: 919  LDVVLIANEALDSRLKSGKGRIICKVDIEKAYDHVN 954



 Score = 32.0 bits (71), Expect(2) = 4e-06
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 221  IVN*NPKGFFRISSEFKQ*DPLSPFLFNI 307
            ++N +P  FF+ S   +Q DPLSPFLF I
Sbjct: 987  LLNGSPVSFFQSSRGLRQGDPLSPFLFII 1015


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