BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00036219
         (370 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   136   3e-30
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          132   5e-29
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatul...   130   2e-28
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]   129   3e-28
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   128   7e-28
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   127   2e-27
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   127   2e-27
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   127   2e-27
ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Popu...   126   3e-27
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]              126   3e-27
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...   125   5e-27
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   125   8e-27
gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsi...   122   7e-26
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         121   9e-26
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi...   121   1e-25
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        119   3e-25
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         119   4e-25
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   119   4e-25
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           119   4e-25
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   119   6e-25

>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  136 bits (342), Expect = 3e-30
 Identities = 62/106 (58%), Positives = 81/106 (76%)
 Frame = -3

Query: 368 TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
           TEAE+MA+ E  KEALW+  ++ DLG +QD + LWCDS SAI L+KN  HH RTKHIDVR
Sbjct: 478 TEAEFMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTKHIDVR 537

Query: 188 YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
           Y+F+RDV+E  DV ++K+HT+ NPAD LTK +  +KFQ  L+LL +
Sbjct: 538 YNFIRDVVEAGDVDVLKIHTSRNPADALTKSIPVNKFQSALELLKL 583


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  132 bits (332), Expect = 5e-29
 Identities = 64/106 (60%), Positives = 82/106 (77%)
 Frame = -3

Query: 368 TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
           TEAEY+A  E VKEA+WL  +L DLG  Q+ + ++CD+ SAI LAKNQ +HARTKHIDV+
Sbjct: 188 TEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVK 247

Query: 188 YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
           YH+VR++IE  DV L K+ T +NP+DMLTKVV+  KFQ CL L+ I
Sbjct: 248 YHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQI 293


>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
           gi|355507159|gb|AES88301.1| Aspartyl-tRNA synthetase
           [Medicago truncatula]
          Length = 803

 Score =  130 bits (326), Expect = 2e-28
 Identities = 59/104 (56%), Positives = 82/104 (78%)
 Frame = -3

Query: 368 TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
           T+AEY+A+VEGVKEA+WL  ++ +LG  Q+C+ + CDS SAIHLA +QV+H RTKHID+R
Sbjct: 51  TQAEYIALVEGVKEAIWLKGMIGELGITQECVKIHCDSQSAIHLANHQVYHERTKHIDIR 110

Query: 188 YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLL 57
            HFVRD+IE  ++ + KV + ENPAD+ TK +  S+F+ CLDL+
Sbjct: 111 LHFVRDMIESKEIVVEKVASEENPADVFTKSLPRSRFKHCLDLI 154


>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
          Length = 215

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/109 (55%), Positives = 84/109 (77%)
 Frame = -3

Query: 368 TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
           TE EYMA+ E  KE+LWL  ++ +LG +Q  + L+CDS SAI+LAKNQV+HARTKHIDVR
Sbjct: 107 TELEYMAIAEAGKESLWLTGLVKELGIQQGGVQLYCDSQSAIYLAKNQVYHARTKHIDVR 166

Query: 188 YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIGSC 42
           +H +++++   ++ L KVHT+EN ADMLTK VT  KF+ CL+L+++  C
Sbjct: 167 FHKIKELVSSGELLLEKVHTSENAADMLTKPVTIEKFKHCLNLINVSKC 215


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  128 bits (322), Expect = 7e-28
 Identities = 60/109 (55%), Positives = 82/109 (75%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMAM E VKEA+WL  I ++L   +  + ++CD+ SAIHLAKNQ  H R+KHIDVR
Sbjct: 1100 TEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVR 1159

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIGSC 42
             HFVRD+I   ++ + KVHT +NP+DMLTK +  +KF+ CL+L+++G C
Sbjct: 1160 LHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLINMGDC 1208


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  127 bits (319), Expect = 2e-27
 Identities = 65/109 (59%), Positives = 77/109 (70%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMA+ E  KE +WL  ++ DLG   D   ++CDS SAI LAK+QVHH RTKHIDVR
Sbjct: 1202 TEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTKHIDVR 1261

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIGSC 42
            YHF+R    E  + + KV T +NPADM TK V  SKFQ CLDLL+I SC
Sbjct: 1262 YHFLR---SEKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNIRSC 1307


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  127 bits (319), Expect = 2e-27
 Identities = 58/108 (53%), Positives = 81/108 (75%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TE+EYM++ E VKEA+WL  +L D G +Q  + ++CDS SAI L+KN VHH RTKHIDV+
Sbjct: 1248 TESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVK 1307

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIGS 45
            YHF+R++I +  V ++K+ T +NPAD+ TKV+  SKFQ  L+LL + S
Sbjct: 1308 YHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKFQAALNLLRVKS 1355


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  127 bits (318), Expect = 2e-27
 Identities = 55/106 (51%), Positives = 80/106 (75%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEY+A+ E  KEA+W+  +L D+G +QD + +WCDS SAI L+KN V+H RTKHIDVR
Sbjct: 1247 TEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVR 1306

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
            ++++RDV+E  DV ++K+HT+ NP D LTK +  +KF+  L +L +
Sbjct: 1307 FNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVLKL 1352


>ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Populus trichocarpa]
           gi|550323083|gb|EEE98360.2| hypothetical protein
           POPTR_0014s01150g [Populus trichocarpa]
          Length = 905

 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/98 (60%), Positives = 78/98 (79%)
 Frame = -3

Query: 353 MAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVRYHFVR 174
           MA+ E  KEA+WL  +++DLG  Q+ +++ CDS SAI LAKNQVHH+RTKHIDVR+HFVR
Sbjct: 1   MAVTEAFKEAIWLHGLIEDLGIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVR 60

Query: 173 DVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDL 60
           ++++E D+ L K+ T +NPADMLTK V+  KFQ CLDL
Sbjct: 61  EIVDEGDILLQKIGTADNPADMLTKCVSGIKFQHCLDL 98


>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
          Length = 353

 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/98 (60%), Positives = 78/98 (79%)
 Frame = -3

Query: 353 MAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVRYHFVR 174
           MA+ E  KEA+WL  +++DLG  Q+ +++ CDS SAI LAKNQVHH+RTKHIDVR+HFVR
Sbjct: 1   MAVTEAFKEAIWLHGLIEDLGIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVR 60

Query: 173 DVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDL 60
           ++++E D+ L K+ T +NPADMLTK V+  KFQ CLDL
Sbjct: 61  EIVDEGDILLQKIGTADNPADMLTKCVSGIKFQHCLDL 98


>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score =  125 bits (315), Expect = 5e-27
 Identities = 58/106 (54%), Positives = 79/106 (74%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMA+ +G KEA+WL   + +LG  Q  +N+ CDS SAI LAKN V+H RTKHIDV+
Sbjct: 1029 TEAEYMALTDGAKEAIWLKGHVSELGFVQKTVNIHCDSQSAIALAKNAVYHERTKHIDVK 1088

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
            YHF+RD++   +V ++K+ T +NPAD+ TKV+  SKFQ  L+LL +
Sbjct: 1089 YHFIRDLVNNGEVQVLKIDTEDNPADIFTKVLPVSKFQDALELLRV 1134


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  125 bits (313), Expect = 8e-27
 Identities = 58/108 (53%), Positives = 78/108 (72%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMA+ E VKEA+WL  +  ++G +QD + + CDS SAI L+KN VHH RTKHIDVR
Sbjct: 1234 TEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVR 1293

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIGS 45
            YHF+R+ I + ++ ++K+ T  NPAD+ TK V  SK Q+ L LL + S
Sbjct: 1294 YHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLRVSS 1341


>gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsis thaliana]
           gi|7267201|emb|CAB77912.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 570

 Score =  122 bits (305), Expect = 7e-26
 Identities = 56/97 (57%), Positives = 73/97 (75%)
 Frame = -3

Query: 368 TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
           TEAEY+A+ E VKEALW+  +L D+G KQD + +W DS   I L+K  + H RTKHI V+
Sbjct: 474 TEAEYVAITEAVKEALWMQGLLKDMGVKQDKVLVWSDSQCVISLSKKNMFHERTKHIAVK 533

Query: 188 YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKF 78
           YHF+RDVIE  DV ++K+HT++NPADMLTKV+   KF
Sbjct: 534 YHFIRDVIENGDVEVLKIHTSQNPADMLTKVIPVQKF 570


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  121 bits (304), Expect = 9e-26
 Identities = 56/108 (51%), Positives = 78/108 (72%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TE EYM++ E VKEA+WL  +L D G +Q  + ++CDS SAI L+KN VHH RTKHIDV+
Sbjct: 1255 TECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVK 1314

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIGS 45
            +HF+R++I +  V + K+ T +NPAD+ TKV+  +KFQ  LD L + S
Sbjct: 1315 FHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFLRVKS 1362


>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  121 bits (303), Expect = 1e-25
 Identities = 55/106 (51%), Positives = 77/106 (72%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYM++ E VKEA+W+  +L + G +Q  + ++CDS SAI L+KN VHH RTKHIDVR
Sbjct: 1225 TEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVR 1284

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
            Y ++RD+I   D  ++K+ T +NPAD+ TK+V  +KFQ  L LL +
Sbjct: 1285 YQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAALTLLQV 1330


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  119 bits (299), Expect = 3e-25
 Identities = 57/106 (53%), Positives = 77/106 (72%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMA+ E  KEA+WL  +  +L     C+N++CDS SAI L K+Q+ H RTKHIDVR
Sbjct: 1074 TEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVR 1133

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
            YHF+R VI E DV + K+ T++NPADM+TK V ++KF+ C  L+ +
Sbjct: 1134 YHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGV 1179


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  119 bits (298), Expect = 4e-25
 Identities = 56/106 (52%), Positives = 77/106 (72%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMA+ E  KEALWL  +  +L     C+N++CDS SAI+L ++Q+ H RTKHIDVR
Sbjct: 837  TEAEYMAISEACKEALWLRGLYTELCGVTSCINIFCDSQSAIYLTEDQMFHERTKHIDVR 896

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
            YHF+R VI E DV + K+ T++NPADM+ K V ++KF+ C  L+ +
Sbjct: 897  YHFIRGVIAEGDVKVCKISTHDNPADMMIKAVPATKFELCSSLVGV 942


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  119 bits (298), Expect = 4e-25
 Identities = 57/107 (53%), Positives = 80/107 (74%)
 Frame = -3

Query: 368 TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
           TEAEYMAM E VKE +WL  I+++L   +  + ++CD+ SAIHLAKNQ  H R+KHIDVR
Sbjct: 627 TEAEYMAMTEVVKEVIWLKGIIEELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVR 686

Query: 188 YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIG 48
            HFVRD+I   ++ + KV T +NP+DMLTK +  +KF+ CL+L+++G
Sbjct: 687 LHFVRDIIAVGEIGVGKVPTKDNPSDMLTKSLNVTKFKHCLNLINMG 733


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  119 bits (298), Expect = 4e-25
 Identities = 56/106 (52%), Positives = 77/106 (72%)
 Frame = -3

Query: 368  TEAEYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVR 189
            TEAEYMA+ E  KEALWL  +  +L     C+N++CDS SAI+L ++Q+ H RTKHIDVR
Sbjct: 837  TEAEYMAISEACKEALWLRGLYTELCGVTSCINIFCDSQSAIYLTEDQMFHERTKHIDVR 896

Query: 188  YHFVRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHI 51
            YHF+R VI E DV + K+ T++NPADM+ K V ++KF+ C  L+ +
Sbjct: 897  YHFIRGVIAEGDVKVCKISTHDNPADMMIKAVPATKFELCSSLVGV 942


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  119 bits (297), Expect = 6e-25
 Identities = 54/104 (51%), Positives = 77/104 (74%)
 Frame = -3

Query: 359  EYMAMVEGVKEALWLWDILDDLGTKQDCMNLWCDS*SAIHLAKNQVHHARTKHIDVRYHF 180
            EY+A  E  KEALWL  ++ +LG  Q  + ++CDS SA+ L KNQ  H RTKHIDVR+HF
Sbjct: 834  EYVAAAEATKEALWLKGLVSELGMNQKSVTVFCDSQSALCLTKNQGFHERTKHIDVRFHF 893

Query: 179  VRDVIEECDVSLIKVHTNENPADMLTKVVTSSKFQQCLDLLHIG 48
            +RD+ E+  V++ K+ T +NPADMLTK ++  KF+QCL+L+++G
Sbjct: 894  IRDIAEQGLVNVSKISTKDNPADMLTKPISKVKFKQCLNLINVG 937