BLASTX nr result
ID: Akebia24_contig00035678
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00035678 (295 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28998.3| unnamed protein product [Vitis vinifera] 67 2e-09 ref|XP_006484505.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08 ref|XP_006484504.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08 ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06 >emb|CBI28998.3| unnamed protein product [Vitis vinifera] Length = 732 Score = 67.4 bits (163), Expect = 2e-09 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 7/96 (7%) Frame = +1 Query: 28 ISMRKPQLSFSQLKSFIKLPNKPSNF--HFLSSIHHYHTSLN-----NLSLEKKDPTTFA 186 +S+ + + S F+ N S F L + HH +TS + +LS + DPT + Sbjct: 22 LSILQTKYSKGSTVPFVSKLNHLSLFTNKMLRNQHHVYTSKSCNCSSSLSF-RNDPTALS 80 Query: 187 TALTLSSNLKSLILGNQIHAQIIKLGFSKDIFSQNN 294 TALT S+N K ++LG+QIHAQIIKLGF DIFSQNN Sbjct: 81 TALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNN 116 >ref|XP_006484505.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like isoform X2 [Citrus sinensis] Length = 752 Score = 63.2 bits (152), Expect = 4e-08 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Frame = +1 Query: 64 LKSFIKLPNKPSNFHFLSSIHHYHTSLNNL-----SLEKKDPTTFATALTLSSNLKSLIL 228 LK +KPS HF ++ H N S +KDPT A +L+LS NLKS +L Sbjct: 4 LKRAFLFADKPS-CHFHATRKRIHRLCGNNQFCSDSFLRKDPTFLAKSLSLSENLKSRVL 62 Query: 229 GNQIHAQIIKLGFSKDIFSQNN 294 G Q+H I+KLGF+ DIF QNN Sbjct: 63 GTQVHGHIVKLGFTNDIFLQNN 84 >ref|XP_006484504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like isoform X1 [Citrus sinensis] Length = 798 Score = 63.2 bits (152), Expect = 4e-08 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Frame = +1 Query: 64 LKSFIKLPNKPSNFHFLSSIHHYHTSLNNL-----SLEKKDPTTFATALTLSSNLKSLIL 228 LK +KPS HF ++ H N S +KDPT A +L+LS NLKS +L Sbjct: 4 LKRAFLFADKPS-CHFHATRKRIHRLCGNNQFCSDSFLRKDPTFLAKSLSLSENLKSRVL 62 Query: 229 GNQIHAQIIKLGFSKDIFSQNN 294 G Q+H I+KLGF+ DIF QNN Sbjct: 63 GTQVHGHIVKLGFTNDIFLQNN 84 >ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like [Cucumis sativus] Length = 759 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/43 (62%), Positives = 31/43 (72%) Frame = +1 Query: 166 KDPTTFATALTLSSNLKSLILGNQIHAQIIKLGFSKDIFSQNN 294 +DP T ATAL+LS N KSLILG Q+H + KLGF D FS NN Sbjct: 10 RDPKTIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNN 52