BLASTX nr result
ID: Akebia24_contig00034927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00034927
(239 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008963365.1| hypothetical chloroplast RF19 [Camellia olei... 139 5e-31
ref|YP_008593172.1| hypothetical chloroplast RF1 (chloroplast) [... 139 5e-31
ref|YP_008593083.1| hypothetical chloroplast RF1 (chloroplast) [... 139 5e-31
gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camel... 139 5e-31
ref|YP_008592994.1| hypothetical chloroplast RF1 (chloroplast) [... 139 5e-31
ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|43... 139 5e-31
gb|AFK81532.1| hypothetical chloroplast RF19 [Camellia taliensis] 138 9e-31
gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis ... 138 9e-31
ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [... 138 9e-31
ref|YP_008592904.1| hypothetical chloroplast RF1 (chloroplast) [... 138 9e-31
ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [... 138 9e-31
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 137 2e-30
gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua] 137 2e-30
gb|AEK71694.1| hypothetical chloroplast RF1 [Cornus florida] 134 2e-29
gb|ADD30914.1| putative RF1 protein [Cornus florida] 134 2e-29
gb|AEK71706.1| hypothetical chloroplast RF1 [Berberidopsis coral... 133 3e-29
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 133 3e-29
gb|AFU96772.1| Ycf1, partial (chloroplast) [Schistostemon retusum] 132 5e-29
ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis ... 132 7e-29
ref|YP_008994344.1| hypothetical chloroplast RF19 [Melianthus vi... 131 1e-28
>ref|YP_008963365.1| hypothetical chloroplast RF19 [Camellia oleifera]
gi|388893354|gb|AFK81445.1| hypothetical chloroplast
RF19 [Camellia oleifera]
Length = 1875
Score = 139 bits (349), Expect = 5e-31
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSKL---EKGTFQTLWF 238
DGNQENSKL E + WF
Sbjct: 337 DGNQENSKLKIIEDKNIELFWF 358
>ref|YP_008593172.1| hypothetical chloroplast RF1 (chloroplast) [Camellia yunnanensis]
gi|537362852|gb|AGU44655.1| hypothetical chloroplast RF1
(chloroplast) [Camellia yunnanensis]
Length = 1873
Score = 139 bits (349), Expect = 5e-31
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSKL---EKGTFQTLWF 238
DGNQENSKL E + WF
Sbjct: 337 DGNQENSKLKIIEDKNIELFWF 358
>ref|YP_008593083.1| hypothetical chloroplast RF1 (chloroplast) [Camellia pitardii]
gi|537362762|gb|AGU44566.1| hypothetical chloroplast RF1
(chloroplast) [Camellia pitardii]
Length = 1871
Score = 139 bits (349), Expect = 5e-31
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSKL---EKGTFQTLWF 238
DGNQENSKL E + WF
Sbjct: 337 DGNQENSKLKIIEDKNIELFWF 358
>gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis]
Length = 1869
Score = 139 bits (349), Expect = 5e-31
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSKL---EKGTFQTLWF 238
DGNQENSKL E + WF
Sbjct: 337 DGNQENSKLKIIEDKNIELFWF 358
>ref|YP_008592994.1| hypothetical chloroplast RF1 (chloroplast) [Camellia
impressinervis] gi|537362582|gb|AGU44388.1| hypothetical
chloroplast RF1 (chloroplast) [Camellia impressinervis]
Length = 1873
Score = 139 bits (349), Expect = 5e-31
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSKL---EKGTFQTLWF 238
DGNQENSKL E + WF
Sbjct: 337 DGNQENSKLKIIEDKNIELFWF 358
>ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|430728331|gb|AGA55655.1|
Ycf1 (chloroplast) [Camellia sinensis]
Length = 1873
Score = 139 bits (349), Expect = 5e-31
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSKL---EKGTFQTLWF 238
DGNQENSKL E + WF
Sbjct: 337 DGNQENSKLKIIEDKNIELFWF 358
>gb|AFK81532.1| hypothetical chloroplast RF19 [Camellia taliensis]
Length = 1158
Score = 138 bits (347), Expect = 9e-31
Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSK---LEKGTFQTLWF 238
DGNQENSK +E + WF
Sbjct: 337 DGNQENSKFKIIEDKNIELFWF 358
>gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis var. assamica]
Length = 1875
Score = 138 bits (347), Expect = 9e-31
Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSK---LEKGTFQTLWF 238
DGNQENSK +E + WF
Sbjct: 337 DGNQENSKFKIIEDKNIELFWF 358
>ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis]
gi|537362942|gb|AGU44744.1| hypothetical chloroplast RF1
(chloroplast) [Camellia taliensis]
Length = 1869
Score = 138 bits (347), Expect = 9e-31
Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSK---LEKGTFQTLWF 238
DGNQENSK +E + WF
Sbjct: 337 DGNQENSKFKIIEDKNIELFWF 358
>ref|YP_008592904.1| hypothetical chloroplast RF1 (chloroplast) [Camellia danzaiensis]
gi|537362494|gb|AGU44301.1| hypothetical chloroplast RF1
(chloroplast) [Camellia danzaiensis]
Length = 1871
Score = 138 bits (347), Expect = 9e-31
Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSK---LEKGTFQTLWF 238
DGNQENSK +E + WF
Sbjct: 337 DGNQENSKFKIIEDKNIELFWF 358
>ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [Camellia cuspidata]
gi|537362404|gb|AGU44212.1| hypothetical chloroplast RF1
(chloroplast) [Camellia cuspidata]
Length = 1869
Score = 138 bits (347), Expect = 9e-31
Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSP+ E SYL
Sbjct: 277 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336
Query: 182 DGNQENSK---LEKGTFQTLWF 238
DGNQENSK +E + WF
Sbjct: 337 DGNQENSKFKIIEDKNIELFWF 358
>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
gi|491650429|gb|AGL13489.1| hypothetical chloroplast
RF19 (chloroplast) [Liquidambar formosana]
Length = 1878
Score = 137 bits (345), Expect = 2e-30
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +2
Query: 5 STEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYLD 184
STE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPV E SYLD
Sbjct: 282 STEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVYETSYLD 341
Query: 185 GNQENSKLE 211
GNQENSKLE
Sbjct: 342 GNQENSKLE 350
>gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]
Length = 1882
Score = 137 bits (345), Expect = 2e-30
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +2
Query: 5 STEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYLD 184
STE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPV E SYLD
Sbjct: 282 STEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVYETSYLD 341
Query: 185 GNQENSKLE 211
GNQENSKLE
Sbjct: 342 GNQENSKLE 350
>gb|AEK71694.1| hypothetical chloroplast RF1 [Cornus florida]
Length = 356
Score = 134 bits (336), Expect = 2e-29
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +2
Query: 5 STEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYLD 184
STE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKT DEFHFHFKETCY+NSP+SE SYLD
Sbjct: 285 STEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTTDEFHFHFKETCYQNSPISETSYLD 344
Query: 185 GNQENSKLE 211
GNQENSKL+
Sbjct: 345 GNQENSKLK 353
>gb|ADD30914.1| putative RF1 protein [Cornus florida]
Length = 1867
Score = 134 bits (336), Expect = 2e-29
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +2
Query: 5 STEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYLD 184
STE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKT DEFHFHFKETCY+NSP+SE SYLD
Sbjct: 285 STEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTTDEFHFHFKETCYQNSPISETSYLD 344
Query: 185 GNQENSKLE 211
GNQENSKL+
Sbjct: 345 GNQENSKLK 353
>gb|AEK71706.1| hypothetical chloroplast RF1 [Berberidopsis corallina]
Length = 356
Score = 133 bits (334), Expect = 3e-29
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVN KEKTKDEFHFHFKETCYKNSPV E SYL
Sbjct: 284 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNRKEKTKDEFHFHFKETCYKNSPVYETSYL 343
Query: 182 DGNQENSKLE 211
DGN EN+KLE
Sbjct: 344 DGNPENAKLE 353
>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
Length = 1909
Score = 133 bits (334), Expect = 3e-29
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPSPSL SEEKEDPDKIDETEEIRVN KEKTKDEFHFHFKETCYKNSPV E SYL
Sbjct: 284 GSTEEDPSPSLFSEEKEDPDKIDETEEIRVNRKEKTKDEFHFHFKETCYKNSPVYETSYL 343
Query: 182 DGNQENSKLE 211
DGN EN+KLE
Sbjct: 344 DGNPENAKLE 353
>gb|AFU96772.1| Ycf1, partial (chloroplast) [Schistostemon retusum]
Length = 460
Score = 132 bits (332), Expect = 5e-29
Identities = 63/70 (90%), Positives = 64/70 (91%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYL 181
GSTE+DPS SL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKN PV E YL
Sbjct: 279 GSTEEDPSSSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYL 338
Query: 182 DGNQENSKLE 211
DGNQENSKLE
Sbjct: 339 DGNQENSKLE 348
>ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis saniculifolia]
gi|226933940|gb|ACO92073.1| hypothetical chloroplast RF1
[Megaleranthis saniculifolia]
Length = 1774
Score = 132 bits (331), Expect = 7e-29
Identities = 67/85 (78%), Positives = 70/85 (82%), Gaps = 6/85 (7%)
Frame = +2
Query: 2 GSTEKDPSPSLCSEEKEDPDKIDETEEIRVN--GKEKTKDEFHFHFKETCYKNSPVSENS 175
GSTE+DPSPSLCSEEKEDPDKIDETEEI+VN GKEKTKDEF+FHFKET YKNSPV ENS
Sbjct: 266 GSTEEDPSPSLCSEEKEDPDKIDETEEIQVNLNGKEKTKDEFNFHFKETYYKNSPVYENS 325
Query: 176 YLDGNQENSKL----EKGTFQTLWF 238
YLDGNQEN K EK F WF
Sbjct: 326 YLDGNQENWKFLIKKEKNLFLLFWF 350
>ref|YP_008994344.1| hypothetical chloroplast RF19 [Melianthus villosus]
gi|527355194|gb|AGS13063.1| hypothetical chloroplast
RF19 [Melianthus villosus]
Length = 1845
Score = 131 bits (329), Expect = 1e-28
Identities = 66/82 (80%), Positives = 68/82 (82%), Gaps = 4/82 (4%)
Frame = +2
Query: 5 STEKDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVSENSYLD 184
+TE+DPSPSL SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKET YK SPV E SYLD
Sbjct: 271 TTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETSYKKSPVYETSYLD 330
Query: 185 GNQENSKLE----KGTFQTLWF 238
GNQENSKLE K LWF
Sbjct: 331 GNQENSKLEIFKDKEDKYLLWF 352