BLASTX nr result

ID: Akebia24_contig00034906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00034906
         (205 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ98751.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   5e-06
ref|XP_006645358.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    56   6e-06
ref|XP_003565120.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    56   6e-06
gb|EEE56046.1| hypothetical protein OsJ_04843 [Oryza sativa Japo...    56   6e-06
gb|ABK24478.1| unknown [Picea sitchensis]                              56   6e-06
ref|NP_001045467.1| Os01g0960500 [Oryza sativa Japonica Group] g...    56   6e-06
ref|XP_004971340.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    55   8e-06
ref|XP_004971338.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    55   8e-06

>dbj|BAJ98751.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   +STCP+CR+PIT R+R+
Sbjct: 349 AFQCGHLTCKECGPTLSTCPLCRAPITVRVRL 380


>ref|XP_006645358.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Oryza
           brachyantha]
          Length = 387

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   +STCP+CR PIT R+R+
Sbjct: 354 AFQCGHLTCKECGPTLSTCPLCRVPITMRVRL 385


>ref|XP_003565120.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Brachypodium
           distachyon]
          Length = 388

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   +STCP+CR+PIT R+R+
Sbjct: 355 AFQCGHLTCKECGPTLSTCPMCRAPITVRVRL 386


>gb|EEE56046.1| hypothetical protein OsJ_04843 [Oryza sativa Japonica Group]
          Length = 626

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   +STCP+CR PIT R+R+
Sbjct: 593 AFQCGHLTCKECGPTLSTCPLCRVPITMRVRL 624


>gb|ABK24478.1| unknown [Picea sitchensis]
          Length = 426

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF CGH+TC+ CS N+S CP+CR PI+ RLR+
Sbjct: 392 AFGCGHMTCRNCSQNLSNCPLCRMPISTRLRV 423


>ref|NP_001045467.1| Os01g0960500 [Oryza sativa Japonica Group]
           gi|57899166|dbj|BAD87218.1| copine I-like [Oryza sativa
           Japonica Group] gi|57900296|dbj|BAD87129.1| copine
           I-like [Oryza sativa Japonica Group]
           gi|113534998|dbj|BAF07381.1| Os01g0960500 [Oryza sativa
           Japonica Group] gi|215694523|dbj|BAG89516.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218189782|gb|EEC72209.1| hypothetical protein
           OsI_05297 [Oryza sativa Indica Group]
          Length = 387

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   +STCP+CR PIT R+R+
Sbjct: 354 AFQCGHLTCKECGPTLSTCPLCRVPITMRVRL 385


>ref|XP_004971340.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like isoform X3
           [Setaria italica]
          Length = 387

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   + TCP+CR PIT R+RI
Sbjct: 354 AFQCGHLTCKECGPTLPTCPLCRKPITMRVRI 385


>ref|XP_004971338.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like isoform X1
           [Setaria italica]
          Length = 432

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 204 AFECGHLTCKGCSDNISTCPICRSPITRRLRI 109
           AF+CGHLTCK C   + TCP+CR PIT R+RI
Sbjct: 399 AFQCGHLTCKECGPTLPTCPLCRKPITMRVRI 430


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