BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00034794
         (1020 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [S...   159   3e-59
emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera]   171   3e-57
emb|CAN82625.1| hypothetical protein VITISV_010133 [Vitis vinifera]   112   6e-39
emb|CAN74058.1| hypothetical protein VITISV_027639 [Vitis vinifera]   157   7e-36
ref|XP_004253508.1| PREDICTED: genome polyprotein-like [Solanum ...   131   4e-28
gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus] ...    83   2e-27
dbj|BAO53505.1| reverse transcriptase [Cauliflower mosaic virus]       83   2e-27
dbj|BAO53218.1| reverse transcriptase [Cauliflower mosaic virus]...    83   2e-27
dbj|BAO53526.1| reverse transcriptase [Cauliflower mosaic virus]       83   2e-27
gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]               82   4e-27
dbj|BAO53624.1| reverse transcriptase [Cauliflower mosaic virus]       82   5e-27
dbj|BAO53617.1| reverse transcriptase [Cauliflower mosaic virus]       82   5e-27
gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]        82   6e-27
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]       82   6e-27
dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]       82   6e-27
dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]       82   6e-27
dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]       82   6e-27
dbj|BAO53547.1| reverse transcriptase [Cauliflower mosaic virus]       81   6e-27
emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]     81   8e-27
dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]       81   8e-27

>ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [Sorghum bicolor]
            gi|241938880|gb|EES12025.1| hypothetical protein
            SORBIDRAFT_06g013680 [Sorghum bicolor]
          Length = 1360

 Score =  159 bits (403), Expect(2) = 3e-59
 Identities = 91/164 (55%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
 Frame = +3

Query: 258  KSNP---RQMNTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGILLHISPKNN 428
            K NP      +T  V +IK +VK  PCL I +    KII+ DA    YGGIL     K++
Sbjct: 1184 KKNPPAWTTRHTQAVKQIKDKVKRLPCLYILDHDALKIIETDASDFGYGGILKQ--RKDS 1241

Query: 429  EQ*LVRFTSGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQK 608
            ++ LV F SG WN  Q+NYS IKKEILAIV  V KFQ ++LNQKFL+++DCK AKDVLQ+
Sbjct: 1242 KEQLVWFASGTWNDAQRNYSTIKKEILAIVKIVSKFQGELLNQKFLLRIDCKAAKDVLQQ 1301

Query: 609  DVKNLASKQNFARWQASLSIFYFDIKFISGSQNYLADFLTHEFV 740
            DV+NL SKQ FARWQA LS F FDI+ I G  N L DFL+ EF+
Sbjct: 1302 DVENLVSKQIFARWQAILSCFDFDIEHIKGEVNSLPDFLSREFL 1345



 Score = 97.1 bits (240), Expect(2) = 3e-59
 Identities = 47/81 (58%), Positives = 61/81 (75%)
 Frame = +2

Query: 5    IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
            +V+S RK+KLFQT+IQFLG  I++  +    RVI FADKF D+I +KKQLQRFLGCLNYV
Sbjct: 1106 LVISARKMKLFQTNIQFLGYKIQHDQVLPVTRVIEFADKFPDEIKEKKQLQRFLGCLNYV 1165

Query: 185  LNFIKDLVPERKLLFSGLKKS 247
             +F + L  +RK+L   LKK+
Sbjct: 1166 SDFYERLAKDRKILTERLKKN 1186


>emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera]
          Length = 2913

 Score =  171 bits (432), Expect(2) = 3e-57
 Identities = 93/164 (56%), Positives = 114/164 (69%), Gaps = 3/164 (1%)
 Frame = +3

Query: 258  KSNPRQMN---TLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGILLHISPKNN 428
            K NP   N   T IV  +K RVK  PCL + +    KI++ DA  + +GGIL   S  NN
Sbjct: 1000 KKNPVPWNEDHTKIVKIVKSRVKXLPCLALADHKAFKIVETDASDIGFGGILKQRS--NN 1057

Query: 429  EQ*LVRFTSGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQK 608
            ++ LVRFTSG WN  Q NYS IKKEIL+IVLC+ KFQ+ +LNQ+FL++VDCK AK VLQK
Sbjct: 1058 QELLVRFTSGTWNHAQLNYSTIKKEILSIVLCISKFQDDLLNQEFLLRVDCKSAKSVLQK 1117

Query: 609  DVKNLASKQNFARWQASLSIFYFDIKFISGSQNYLADFLTHEFV 740
            DVKN+ASK  FARWQA LS F F I++I G  N + DFLT EF+
Sbjct: 1118 DVKNIASKHIFARWQAILSNFDFQIEYIKGENNSIPDFLTREFL 1161



 Score = 79.3 bits (194), Expect(2) = 3e-57
 Identities = 45/79 (56%), Positives = 51/79 (64%)
 Frame = +2

Query: 11   LSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYVLN 190
            LS  KI LFQT  +FLG +I   T T   R I FADKF D+I DKKQLQRFLG LNYV +
Sbjct: 924  LSATKINLFQTKXRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSLNYVSD 983

Query: 191  FIKDLVPERKLLFSGLKKS 247
            FI+DL      L   LKK+
Sbjct: 984  FIQDLSQLCAPLRQRLKKN 1002


>emb|CAN82625.1| hypothetical protein VITISV_010133 [Vitis vinifera]
          Length = 1102

 Score =  112 bits (281), Expect(2) = 6e-39
 Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
 Frame = +3

Query: 258  KSNPRQMN---TLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGILLHISPKNN 428
            K NP   N   T IV  +K +VK  PCL + + +  K ++ DA  + YGGIL      + 
Sbjct: 951  KKNPVPWNEDHTKIVKIVKSKVKTLPCLALADPTAFKFVETDASDIGYGGILKQ--KIDT 1008

Query: 429  EQ*LVRFTSGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQK 608
            ++ LVR+TSG WN  Q NY+ IKKEIL+IVLC+ KFQ+ +LNQ+FL++VDC  AK VLQK
Sbjct: 1009 QEKLVRYTSGTWNNAQLNYNTIKKEILSIVLCISKFQDDLLNQEFLLRVDCLSAKSVLQK 1068

Query: 609  DVKNLASKQNF 641
            D + +  K  F
Sbjct: 1069 DPRPVXKKXKF 1079



 Score = 76.3 bits (186), Expect(2) = 6e-39
 Identities = 41/67 (61%), Positives = 46/67 (68%)
 Frame = +2

Query: 11   LSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYVLN 190
            LS  KIKLFQT I+FLG  I   +IT   R + FADKF D+I DKKQLQRFLG LNYV  
Sbjct: 890  LSTTKIKLFQTRIRFLGHYIHQGSITPIQRSLEFADKFPDEIKDKKQLQRFLGSLNYVQR 949

Query: 191  FIKDLVP 211
              K+ VP
Sbjct: 950  LKKNPVP 956


>emb|CAN74058.1| hypothetical protein VITISV_027639 [Vitis vinifera]
          Length = 335

 Score =  157 bits (397), Expect = 7e-36
 Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 3/158 (1%)
 Frame = +3

Query: 258 KSNPRQMN---TLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGILLHISPKNN 428
           K NP   N   T IV  +K RVK  PCL + +    KI++ DA  + +GGIL   S  NN
Sbjct: 177 KKNPVPWNEDHTKIVKIVKSRVKTLPCLTLADHKAFKIVETDAADIGFGGILKQRS--NN 234

Query: 429 EQ*LVRFTSGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQK 608
           ++ LVRFTSG WN  Q NY+ IKKE L+IVLC+ KFQ+ +LNQ+FL++VDCK AK VLQK
Sbjct: 235 QELLVRFTSGTWNHAQLNYNTIKKENLSIVLCISKFQDDLLNQEFLLRVDCKSAKSVLQK 294

Query: 609 DVKNLASKQNFARWQASLSIFYFDIKFISGSQNYLADF 722
           DVKN+ASK  FARWQA LS F F I++I G +N +  F
Sbjct: 295 DVKNIASKHIFARWQAILSNFDFQIEYIKGEKNSIPGF 332



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 51/110 (46%), Positives = 64/110 (58%)
 Frame = +2

Query: 11  LSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYVLN 190
           LS  KI LFQT ++FLG +I   T T   R I FADKF D+I DKKQLQRFLG LNYV +
Sbjct: 101 LSATKINLFQTKVRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSLNYVSD 160

Query: 191 FIKDLVPERKLLFSGLKKSKDLQKQPSTNEHSYCSKNKAKSKNSPLPKYT 340
           FI+DL      L++ L++       P   +H+   K   KS+   LP  T
Sbjct: 161 FIQDL----SQLYAPLRQRLKKNPVPWNEDHTKIVK-IVKSRVKTLPCLT 205


>ref|XP_004253508.1| PREDICTED: genome polyprotein-like [Solanum lycopersicum]
          Length = 545

 Score =  131 bits (330), Expect = 4e-28
 Identities = 69/126 (54%), Positives = 91/126 (72%)
 Frame = +3

Query: 276 MNTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGILLHISPKNNEQ*LVRFTS 455
           ++T +V +IK RVK  PCL +PN    KII+ DA  + +GGIL      + EQ ++ FTS
Sbjct: 288 IHTNVVKQIKLRVKNLPCLYLPNPQAFKIIETDASDIGFGGILKQ-KVFDKEQ-IIAFTS 345

Query: 456 GIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASKQ 635
             WN  QQNYS +KKE+LAIVL +  FQ+ ++NQKFL++VDCK AK++LQKDVKNLASK 
Sbjct: 346 KHWNPAQQNYSTVKKEVLAIVLSISNFQSDLINQKFLVRVDCKSAKEILQKDVKNLASKH 405

Query: 636 NFARWQ 653
            FARW+
Sbjct: 406 IFARWE 411



 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           + +S+ K+ LFQT I+FLG NI   TI   NR I F DKF D I DK QLQRFLGCLNYV
Sbjct: 201 LAVSKTKVSLFQTKIRFLGHNIHQGTIIPINRAIEFTDKFPDQIIDKTQLQRFLGCLNYV 260

Query: 185 LNFIKDLVPERKLLFSGLKKSKDLQKQPSTNEHSYCSKN-KAKSKNSP 325
            +F   L    K L   LKK       P ++ H+   K  K + KN P
Sbjct: 261 ADFCPQLSTIIKPLHDRLKK----DPPPWSDIHTNVVKQIKLRVKNLP 304


>gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|530722419|gb|AGT42084.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 675

 Score = 83.2 bits (204), Expect(2) = 2e-27
 Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 516 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 575

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG + T ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 576 SGSFKTAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 635

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 636 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670



 Score = 67.0 bits (162), Expect(2) = 2e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 427 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 486

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 487 SDYIPKLAQIRKPLQAKLKEN 507


>dbj|BAO53505.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 83.2 bits (204), Expect(2) = 2e-27
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ NY ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNYFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 2e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53218.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|591288394|dbj|BAO53232.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 674

 Score = 83.2 bits (204), Expect(2) = 2e-27
 Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG + T ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKTAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 2e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53526.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 671

 Score = 83.2 bits (204), Expect(2) = 2e-27
 Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 512 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 571

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG + T ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 572 SGSFKTAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 631

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 632 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 666



 Score = 67.0 bits (162), Expect(2) = 2e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 423 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 482

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 483 SDYIPKLAQIRKPLQAKLKEN 503


>gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]
          Length = 675

 Score = 82.4 bits (202), Expect(2) = 4e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 516 DTLYMQKVKKNLQAFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 575

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 576 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 635

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 636 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670



 Score = 67.0 bits (162), Expect(2) = 4e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 427 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 486

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 487 SDYIPKLAQIRKPLQAKLKEN 507


>dbj|BAO53624.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 82.0 bits (201), Expect(2) = 5e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINESTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 5e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53617.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 82.0 bits (201), Expect(2) = 5e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINESTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 5e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 81.6 bits (200), Expect(2) = 6e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 516 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEDTNTELICRYA 575

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 576 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 635

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 636 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670



 Score = 67.0 bits (162), Expect(2) = 6e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 427 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 486

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 487 SDYIPKLAQIRKPLQAKLKEN 507


>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 81.6 bits (200), Expect(2) = 6e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIQINESANTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 6e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 81.6 bits (200), Expect(2) = 6e-27
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+  +N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGSNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 6e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 81.6 bits (200), Expect(2) = 6e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDNYWGGMLKAIKINEGTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 6e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 81.6 bits (200), Expect(2) = 6e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEDTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.0 bits (162), Expect(2) = 6e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYIPKLAQIRKPLQAKLKEN 506


>dbj|BAO53547.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 81.3 bits (199), Expect(2) = 6e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 515 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 574

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 575 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 634

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 635 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669



 Score = 67.4 bits (163), Expect(2) = 6e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 426 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 485

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 486 SDYISKLAQIRKPLQAKLKEN 506


>emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]
          Length = 680

 Score = 81.3 bits (199), Expect(2) = 8e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 521 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 580

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 581 SGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 640

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 641 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 675



 Score = 67.0 bits (162), Expect(2) = 8e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 432 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 491

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 492 SDYIPKLAQIRKPLQAKLKEN 512


>dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 81.3 bits (199), Expect(2) = 8e-27
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +3

Query: 279 NTLIVLKIKQRVKIHPCLNIPNDSYQKIIQADAFKLRYGGIL--LHISPKNNEQ*LVRFT 452
           +TL + K+K+ ++  P L+ P    + II+ DA    +GG+L  + I+   N + + R+ 
Sbjct: 520 DTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYA 579

Query: 453 SGIWNTCQQNYSIIKKEILAIVLCVLKFQNKVLNQKFLIKVDCK*AKDVLQKDVKNLASK 632
           SG +   ++NY    KE LA++  + KF   +    FLI+ D    K  +  + K  +  
Sbjct: 580 SGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKL 639

Query: 633 QNFARWQASLSIFYFDIKFISGSQNYLADFLTHEF 737
               RWQA LS + FD++ I G+ N+ ADFL+ EF
Sbjct: 640 GRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 674



 Score = 67.0 bits (162), Expect(2) = 8e-27
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 5   IVLSQRKIKLFQTSIQFLGLNIENQTITSTNRVIAFADKFSDDITDKKQLQRFLGCLNYV 184
           I+LS++K +LF+  I FLGL I+  T      ++   +KF D + DKKQLQRFLG L Y 
Sbjct: 431 IILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYA 490

Query: 185 LNFIKDLVPERKLLFSGLKKS 247
            ++I  L   RK L + LK++
Sbjct: 491 SDYIPKLAQIRKPLQAKLKEN 511