BLASTX nr result

ID: Akebia24_contig00034142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00034142
         (242 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]          68   1e-09
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|...    61   2e-07
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9...    60   4e-07
ref|XP_006389822.1| hypothetical protein EUTSA_v10018057mg [Eutr...    59   7e-07
dbj|BAJ34529.1| unnamed protein product [Thellungiella halophila]      59   7e-07
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b...    59   9e-07
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9...    58   2e-06
ref|XP_007142513.1| hypothetical protein PHAVU_008G287100g [Phas...    58   2e-06
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr...    57   3e-06
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar...    56   5e-06

>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
          Length = 948

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
 Frame = -3

Query: 237 TGIFDELHSMRSSISVGKSDS-NFSSQ-----FKKRKISANMGSCSFQIFSDTKAILPIL 76
           +GI  E+  MRS ISVG + + +F+++     +KKR+I  N  S S +I  + +A LP L
Sbjct: 9   SGISGEVECMRSDISVGSTCAMDFAAEISNPEWKKRRIILNENSSSSEILREIEASLPTL 68

Query: 75  SSPDYFMKPSLNELAARELTDPGYC 1
             P+Y+M+P  +EL  REL DPGYC
Sbjct: 69  HKPEYYMEPCFDELVQRELMDPGYC 93


>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
           gi|223533319|gb|EEF35071.1| nucleoporin, putative
           [Ricinus communis]
          Length = 1067

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/71 (43%), Positives = 43/71 (60%)
 Frame = -3

Query: 213 SMRSSISVGKSDSNFSSQFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNEL 34
           S +S   VG    +  +Q+KKR++S N    S +I  + +  LP L S DY+M+PSL +L
Sbjct: 28  SCKSDCEVGVF--SLQTQYKKRRLSPNNDDVSCEISREIECSLPTLCSTDYYMEPSLTDL 85

Query: 33  AARELTDPGYC 1
            A EL DPGYC
Sbjct: 86  VAHELIDPGYC 96


>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Glycine max] gi|571506071|ref|XP_006595657.1|
           PREDICTED: nuclear pore complex protein Nup98-Nup96-like
           isoform X2 [Glycine max]
          Length = 1022

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = -3

Query: 189 GKSDSNFSSQFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDP 10
           G SDS      K+R++       S  I ++T+A LPIL+S  Y+ KPSL EL AREL +P
Sbjct: 7   GVSDSCILHTCKRRRVYKGCFHPSIDIMTETEASLPILNSSGYYTKPSLKELVARELVEP 66

Query: 9   GYC 1
           GYC
Sbjct: 67  GYC 69


>ref|XP_006389822.1| hypothetical protein EUTSA_v10018057mg [Eutrema salsugineum]
           gi|557086256|gb|ESQ27108.1| hypothetical protein
           EUTSA_v10018057mg [Eutrema salsugineum]
          Length = 1042

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/59 (49%), Positives = 39/59 (66%)
 Frame = -3

Query: 177 SNFSSQFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDPGYC 1
           SN  S+ KKR+IS +      + + D +  LP L+SPDYF+KPS+NEL  REL +P YC
Sbjct: 13  SNLDSR-KKRRISLDANPVVCEHYKDIRDSLPTLNSPDYFLKPSMNELVQRELENPDYC 70


>dbj|BAJ34529.1| unnamed protein product [Thellungiella halophila]
          Length = 1042

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/59 (49%), Positives = 39/59 (66%)
 Frame = -3

Query: 177 SNFSSQFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDPGYC 1
           SN  S+ KKR+IS +      + + D +  LP L+SPDYF+KPS+NEL  REL +P YC
Sbjct: 13  SNLDSR-KKRRISLDANPVVCEHYKDIRDSLPTLNSPDYFLKPSMNELVQRELENPDYC 70


>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
          Length = 1037

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = -3

Query: 165 SQFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDPGYC 1
           SQ K+RK+S + G    QIF + +A LP L S DYF +P L+ELA REL  PGYC
Sbjct: 16  SQCKRRKVSLD-GVALDQIFGENEAALPTLQSTDYFTEPCLSELAIRELMSPGYC 69


>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
           sinensis]
          Length = 1041

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -3

Query: 162 QFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDPGY 4
           Q++KR IS N  S S +I S+    LP+L SPDY+ +P LN+L  RE+ DPGY
Sbjct: 16  QYRKRNISMNAYSLSCEISSENGDSLPVLCSPDYYTEPLLNDLGKREVIDPGY 68


>ref|XP_007142513.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
           gi|593566839|ref|XP_007142514.1| hypothetical protein
           PHAVU_008G287100g [Phaseolus vulgaris]
           gi|561015646|gb|ESW14507.1| hypothetical protein
           PHAVU_008G287100g [Phaseolus vulgaris]
           gi|561015647|gb|ESW14508.1| hypothetical protein
           PHAVU_008G287100g [Phaseolus vulgaris]
          Length = 1022

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = -3

Query: 189 GKSDSNFSSQFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDP 10
           G +DS      K+R++     + S  + ++T+A LPIL+S  Y+ KPSL EL AREL +P
Sbjct: 7   GVTDSFGLHTCKRRRVYKGCIAPSVDVMTETEAFLPILNSSGYYTKPSLKELVARELVEP 66

Query: 9   GYC 1
           GYC
Sbjct: 67  GYC 69


>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
           gi|557529570|gb|ESR40820.1| hypothetical protein
           CICLE_v10024784mg [Citrus clementina]
          Length = 1041

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -3

Query: 162 QFKKRKISANMGSCSFQIFSDTKAILPILSSPDYFMKPSLNELAARELTDPGY 4
           Q++K  IS N  S S +I S+    LP+L SPDY+ +P LN+LA RE+ DPGY
Sbjct: 16  QYRKGNISMNAYSLSCEISSENGDSLPVLCSPDYYTEPLLNDLAKREVIDPGY 68


>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
           gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
           [Populus trichocarpa]
          Length = 1067

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
 Frame = -3

Query: 234 GIFDELHSMRSSISVGKSDS--------NFSSQFKKRKISANMGSCSFQIFSDTKAILPI 79
           G  +E+ S+RS++S G S          N   Q+KKR+ S        + F   +A+LP 
Sbjct: 11  GSSNEIPSIRSNLSFGTSCELDFEVETLNSEGQYKKRRTSLK-SEPRCEDFRMVEALLPT 69

Query: 78  LSSPDYFMKPSLNELAARELTDPGYC 1
           L S DY+M+P L +LAA E+ DPGYC
Sbjct: 70  LRSVDYYMEPCLMDLAAGEVVDPGYC 95


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