BLASTX nr result

ID: Akebia24_contig00034051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00034051
         (215 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   103   2e-20
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           103   2e-20
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   102   5e-20
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   102   5e-20
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   102   5e-20
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               102   5e-20
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                102   5e-20
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   102   7e-20
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        101   1e-19
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   100   2e-19
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   100   2e-19
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   100   2e-19
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   100   2e-19
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   100   2e-19
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     100   4e-19
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    99   5e-19
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    99   6e-19
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...    99   6e-19
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      99   6e-19
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g...    99   8e-19

>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGIVRH+TI  TPQQN +AERMNRT++ K RCM SN+GL KQFWAE
Sbjct: 530 MEFCSKIFKSYCKSEGIVRHYTIPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAE 589

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 590 AVSTACYLINRSP 602


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/73 (64%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGIVRH+T+  TPQQN +AERMNRT++ K RCM SN+GL KQFWAE
Sbjct: 385 MEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAE 444

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 445 AVSTACYLINRSP 457


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGIVRH+T+  TPQQN +AERMNRT++ K RC+ SN+GL KQFWAE
Sbjct: 771 MEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAE 830

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 831 AVSTACYLINRSP 843


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +++CS  F   CK+EGIVRH+T+  TPQQN +AERMNRT++ K RCM SN+GL KQFWAE
Sbjct: 525 MDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAE 584

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 585 AVSTACYLINRSP 597


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGIVRH+T+  TPQQN +AERMNRT++ K RC+ SN+GL KQFWAE
Sbjct: 564 MEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAE 623

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 624 AVSTACYLINRSP 636


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGI+RH+T+  TPQQN +AERMNRT++ K RCM SN+GL KQFWAE
Sbjct: 381 MEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAE 440

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 441 AVSTACYLINRSP 453


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGI+RH+T+  TPQQN +AERMNRT++ K RCM SN+GL KQFWAE
Sbjct: 549 MEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAE 608

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 609 AVSTACYLINRSP 621


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/73 (61%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+C  EF   CK+EGI RH T+R TPQQN +AERMN+TLLE+ RCM SN+GL ++FWAE
Sbjct: 542 LEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAE 601

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++ P
Sbjct: 602 AVSTACYLINRGP 614


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  101 bits (251), Expect = 1e-19
 Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGIVRH+T+  TPQQN +AERMNR ++ K RCM SN+GL KQFWAE
Sbjct: 564 MEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLPKQFWAE 623

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 624 AVSTACYLINRSP 636


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   EYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAEA 177
           E+CS  F   C+ EGIVRHHTI  TPQQN +AERMNRT++ K RCM SN+ ++K+FWAEA
Sbjct: 558 EFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEA 617

Query: 178 VNIACYLVSKSP 213
            N ACYL+++SP
Sbjct: 618 ANTACYLINRSP 629


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/73 (61%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSI---EFCKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+C+    EFC+ EGIVRH T+R TPQQN +AERMN+TL+++ RCM+ ++GLSK+FWAE
Sbjct: 663 LEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAE 722

Query: 175 AVNIACYLVSKSP 213
           AVN A YLV++SP
Sbjct: 723 AVNTAAYLVNRSP 735


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/73 (61%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4    VEYCSI---EFCKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
            +E+C+    EFC+ EGIVRH T+R TPQQN +AERMN+TL+++ RCM+ ++GLSK+FWAE
Sbjct: 876  LEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAE 935

Query: 175  AVNIACYLVSKSP 213
            AVN A YLV++SP
Sbjct: 936  AVNTAAYLVNRSP 948


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   EYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAEA 177
           E+CS  F   C+ EGIVRHHTI  TPQQN +AERMNRT++ K RCM SN+ ++K+FWAEA
Sbjct: 558 EFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEA 617

Query: 178 VNIACYLVSKSP 213
            N ACYL+++SP
Sbjct: 618 ANTACYLINRSP 629


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   EYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAEA 177
           E+CS  F   C+ EGIVRHHTI  TPQQN +AERMNRT++ K RCM SN+ ++K+FWAEA
Sbjct: 558 EFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEA 617

Query: 178 VNIACYLVSKSP 213
            N ACYL+++SP
Sbjct: 618 ANTACYLINRSP 629


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 46/73 (63%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E CS  F   CK+EGIVRH+T+  TPQQN +AERMNRT++ K RCM SN+ L KQFWAE
Sbjct: 473 MELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAE 532

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 533 AVSTACYLINRSP 545


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 45/73 (61%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSI---EFCKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+C+    EFC+ EGIVRH T+R TPQQN +AERMN+TL+++ RCM+ ++GLSK+FWAE
Sbjct: 518 LEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAE 577

Query: 175 AVNIACYLVSKSP 213
           AVN A YLV+ SP
Sbjct: 578 AVNTAAYLVNXSP 590


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 42/73 (57%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS +F   C++EGIVRH+T+  TPQQN + ERMNRT++ K RCM SN+GL ++FWAE
Sbjct: 503 MEFCSRQFKSYCRSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAE 562

Query: 175 AVNIACYLVSKSP 213
           A + ACYL+++SP
Sbjct: 563 AASTACYLINRSP 575


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   EYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAEA 177
           E+CS  F   C+ EGIVRHHTI  TPQQN +AERMNRT++  TRCM SN+ ++K+FWAE 
Sbjct: 498 EFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNTRCMLSNARMNKRFWAEV 557

Query: 178 VNIACYLVSKSP 213
            N ACYL+++SP
Sbjct: 558 ANTACYLINRSP 569


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/73 (63%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
 Frame = +1

Query: 4   VEYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAE 174
           +E+CS  F   CK+EGIV H+T   TPQQN +AERMNRT++ K RCM SN+GL KQFWAE
Sbjct: 536 MEFCSKIFKSYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKARCMLSNAGLPKQFWAE 595

Query: 175 AVNIACYLVSKSP 213
           AV+ ACYL+++SP
Sbjct: 596 AVSTACYLINRSP 608


>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
           gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
           Japonica Group]
          Length = 759

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
 Frame = +1

Query: 7   EYCSIEF---CKNEGIVRHHTIRKTPQQNRIAERMNRTLLEKTRCMQSNSGLSKQFWAEA 177
           E+CS  F   C+ EGIVRHHTI  TPQQN +AE MNRT++ K RCM SN+ ++K+FWAEA
Sbjct: 376 EFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAEHMNRTIISKARCMLSNARMNKRFWAEA 435

Query: 178 VNIACYLVSKSP 213
            N ACYL+++SP
Sbjct: 436 ANTACYLINRSP 447


Top