BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00032526
         (301 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009026873.1| RNA polymerase beta subunit [Magnolia tripet...   171   1e-40
ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [M...   171   1e-40
ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [M...   171   1e-40
ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [M...   171   1e-40
ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M...   171   1e-40
ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M...   171   1e-40
ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangs...   171   1e-40
ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulip...   171   1e-40
ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [M...   169   3e-40
ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [M...   169   3e-40
ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [M...   169   3e-40
ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [M...   169   3e-40
gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol...   169   3e-40
ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|34...   169   3e-40
ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [M...   168   6e-40
ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus] gi...   163   2e-38
ref|YP_001586174.1| RNA polymerase beta subunit [Acorus american...   163   2e-38
ref|YP_008081357.1| RNA polymerase beta subunit (chloroplast) [T...   157   1e-36
ref|YP_008081449.1| RNA polymerase beta subunit (chloroplast) [T...   157   1e-36
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s...   157   1e-36

>ref|YP_009026873.1| RNA polymerase beta subunit [Magnolia tripetala]
           gi|608608396|gb|AHW51950.1| RNA polymerase beta subunit
           [Magnolia tripetala]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [Magnolia sinica]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [Magnolia dealbata]
           gi|570759917|ref|YP_008993340.1| RNA polymerase beta
           subunit (chloroplast) [Magnolia pyramidata]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [Magnolia cathcartii]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora]
           gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit
           (chloroplast) [Magnolia grandiflora]
           gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit
           (chloroplast) [Magnolia grandiflora]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis]
           gi|452848763|ref|YP_007474444.1| RNA polymerase beta
           subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta
           subunit (chloroplast) [Magnolia officinalis]
           gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangsiensis]
           gi|302424172|gb|ADL39048.1| RNA polymerase beta subunit
           [Magnolia kwangsiensis]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulipifera]
           gi|113200986|gb|ABI32501.1| RNA polymerase beta subunit
           [Liriodendron tulipifera]
          Length = 1079

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/88 (95%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [Magnolia salicifolia]
          Length = 1079

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFID+GLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [Magnolia sprengeri]
          Length = 1079

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFID+GLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliifera]
          Length = 1079

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFID+GLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [Magnolia kobus]
          Length = 1079

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFID+GLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora]
          Length = 1079

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFID+GLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|343887531|gb|AEM65210.1|
           RpoB [Magnolia denudata] gi|372862243|gb|AEX98326.1| RNA
           polymerase beta subunit (chloroplast) [Magnolia
           denudata]
          Length = 1079

 Score =  169 bits (429), Expect = 3e-40
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FSINGKLKMLRDGNEGM TIPGFSQIQFEGFCRFID+GLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [Magnolia odora]
          Length = 1079

 Score =  168 bits (426), Expect = 6e-40
 Identities = 83/88 (94%), Positives = 85/88 (96%)
 Frame = -3

Query: 266 IFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQ 87
           +FS NGKLKMLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEEL+KFPKIEDTDQEIEFQ
Sbjct: 1   MFSRNGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60

Query: 86  LFVETYQLVEPLIKERDAVYELLTYSSE 3
           LFVETYQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  LFVETYQLVEPLIKERDAVYESLTYSSE 88


>ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus]
           gi|74381701|emb|CAI53786.1| RNA polymerase beta subunit
           [Acorus calamus]
          Length = 1083

 Score =  163 bits (413), Expect = 2e-38
 Identities = 81/91 (89%), Positives = 83/91 (91%)
 Frame = -3

Query: 275 MNGIFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEI 96
           M  +FSIN KLKM RDGNEGMFTIPGFSQIQFEGFCRFIDQGL EE +KFPKIEDTDQEI
Sbjct: 1   MGFLFSINRKLKMPRDGNEGMFTIPGFSQIQFEGFCRFIDQGLMEEFHKFPKIEDTDQEI 60

Query: 95  EFQLFVETYQLVEPLIKERDAVYELLTYSSE 3
           EFQLFVE YQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  EFQLFVERYQLVEPLIKERDAVYESLTYSSE 91


>ref|YP_001586174.1| RNA polymerase beta subunit [Acorus americanus]
           gi|182676548|sp|A9LYH7.1|RPOB_ACOAM RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|160369845|gb|ABX38736.1| RNA polymerase beta subunit
           [Acorus americanus]
          Length = 1083

 Score =  163 bits (413), Expect = 2e-38
 Identities = 81/91 (89%), Positives = 83/91 (91%)
 Frame = -3

Query: 275 MNGIFSINGKLKMLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEI 96
           M  +FSIN KLKM RDGNEGMFTIPGFSQIQFEGFCRFIDQGL EE +KFPKIEDTDQEI
Sbjct: 1   MGFLFSINRKLKMPRDGNEGMFTIPGFSQIQFEGFCRFIDQGLMEEFHKFPKIEDTDQEI 60

Query: 95  EFQLFVETYQLVEPLIKERDAVYELLTYSSE 3
           EFQLFVE YQLVEPLIKERDAVYE LTYSSE
Sbjct: 61  EFQLFVERYQLVEPLIKERDAVYESLTYSSE 91


>ref|YP_008081357.1| RNA polymerase beta subunit (chloroplast) [Tetracentron sinense]
           gi|479279195|gb|AGJ72049.1| RNA polymerase beta subunit
           (chloroplast) [Tetracentron sinense]
          Length = 1070

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/79 (97%), Positives = 77/79 (97%)
 Frame = -3

Query: 239 MLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60
           MLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV
Sbjct: 1   MLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60

Query: 59  EPLIKERDAVYELLTYSSE 3
           EPLIKERDAVYE LTYSSE
Sbjct: 61  EPLIKERDAVYESLTYSSE 79


>ref|YP_008081449.1| RNA polymerase beta subunit (chloroplast) [Trochodendron
           aralioides] gi|290489652|gb|ADD31210.1| RNA polymerase
           beta subunit protein [Trochodendron aralioides]
           gi|479279288|gb|AGJ72141.1| RNA polymerase beta subunit
           (chloroplast) [Trochodendron aralioides]
          Length = 1070

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/79 (97%), Positives = 77/79 (97%)
 Frame = -3

Query: 239 MLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60
           MLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV
Sbjct: 1   MLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60

Query: 59  EPLIKERDAVYELLTYSSE 3
           EPLIKERDAVYE LTYSSE
Sbjct: 61  EPLIKERDAVYESLTYSSE 79


>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
           gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
           [Megaleranthis saniculifolia]
          Length = 1071

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/79 (97%), Positives = 77/79 (97%)
 Frame = -3

Query: 239 MLRDGNEGMFTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60
           MLRDGNEGM TIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV
Sbjct: 1   MLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60

Query: 59  EPLIKERDAVYELLTYSSE 3
           EPLIKERDAVYE LTYSSE
Sbjct: 61  EPLIKERDAVYESLTYSSE 79