BLASTX nr result

ID: Akebia24_contig00030264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00030264
         (532 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323328.2| hypothetical protein POPTR_0016s05850g [Popu...    58   2e-06

>ref|XP_002323328.2| hypothetical protein POPTR_0016s05850g [Populus trichocarpa]
           gi|550320927|gb|EEF05089.2| hypothetical protein
           POPTR_0016s05850g [Populus trichocarpa]
          Length = 341

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 50/156 (32%), Positives = 62/156 (39%), Gaps = 6/156 (3%)
 Frame = +3

Query: 81  NKGDDSMQHSHTQIEDPQVELAGEEVGAKDKRLVTSSHSQRNGNSSGGKACVGILVSSSS 260
           +KG D   H     E+ +V L  E  G K   L   S+  R G+       V +L  SSS
Sbjct: 70  SKGHDDCSHGDGPQEEKKV-LLEEGDGIKGGELREKSNDTRRGSFLSEGVHVTVLQQSSS 128

Query: 261 PSHPGGRWWDGERMSPLKKRKESLV---XXXXXXXXXXXXXTILRTKRSKKWVHQQETKE 431
                GRW +GE+  PLKKR+ S                  T ++TK +KK V Q    E
Sbjct: 129 SHQGVGRWGEGEKAFPLKKRRGSFERRWNEETIVDRNKKMKTKMKTKMNKKCVQQNGDNE 188

Query: 432 ED---IVXXXXXXXXXXXXXXXXXXXSRCSRVNGRG 530
           ED                        SRCSRVNGRG
Sbjct: 189 EDEKETKEGAGSNIKAKPRGGALLEGSRCSRVNGRG 224


Top