BLASTX nr result

ID: Akebia24_contig00030020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00030020
         (204 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC10292.1| Pre-mRNA-splicing factor SF2 [Morus notabilis]          76   4e-12
ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    76   4e-12
ref|XP_007205653.1| hypothetical protein PRUPE_ppa009360mg [Prun...    75   1e-11
ref|XP_007205652.1| hypothetical protein PRUPE_ppa009360mg [Prun...    75   1e-11
emb|CBI36847.3| unnamed protein product [Vitis vinifera]               75   1e-11
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    75   1e-11
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]    75   1e-11
ref|XP_006375743.1| hypothetical protein POPTR_0013s01700g [Popu...    74   2e-11
ref|XP_006375742.1| hypothetical protein POPTR_0013s01700g [Popu...    74   2e-11
ref|XP_004984425.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   2e-11
ref|XP_004984424.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   2e-11
ref|XP_004962313.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   2e-11
ref|XP_004962312.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    74   2e-11
gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcr...    74   2e-11
gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcr...    74   2e-11
gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcr...    74   2e-11
ref|XP_002512441.1| arginine/serine-rich splicing factor, putati...    74   2e-11
ref|NP_001151386.1| LOC100285019 [Zea mays] gi|195646352|gb|ACG4...    74   2e-11
ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group] g...    74   2e-11
gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed...    74   2e-11

>gb|EXC10292.1| Pre-mRNA-splicing factor SF2 [Morus notabilis]
          Length = 389

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/66 (59%), Positives = 41/66 (62%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGY+FDGHRLRVELAHGG                         SDYRVL+TGLPSSAS
Sbjct: 64  GRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSYGGGRGGRGVSRRSDYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/66 (59%), Positives = 41/66 (62%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGY+FDGHRLRVELAHGG                         SDYRVL+TGLPSSAS
Sbjct: 64  GRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRSDYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


>ref|XP_007205653.1| hypothetical protein PRUPE_ppa009360mg [Prunus persica]
           gi|462401295|gb|EMJ06852.1| hypothetical protein
           PRUPE_ppa009360mg [Prunus persica]
          Length = 295

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/67 (56%), Positives = 41/67 (61%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDG+RLRVELAHGG                         SDYRVL+TGLP SA
Sbjct: 63  YGRDGYNFDGYRLRVELAHGGRGHSSSMDRYSSYSHSSSSRGASRRSDYRVLVTGLPPSA 122

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 123 SWQDLKD 129


>ref|XP_007205652.1| hypothetical protein PRUPE_ppa009360mg [Prunus persica]
           gi|462401294|gb|EMJ06851.1| hypothetical protein
           PRUPE_ppa009360mg [Prunus persica]
          Length = 270

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/67 (56%), Positives = 41/67 (61%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDG+RLRVELAHGG                         SDYRVL+TGLP SA
Sbjct: 63  YGRDGYNFDGYRLRVELAHGGRGHSSSMDRYSSYSHSSSSRGASRRSDYRVLVTGLPPSA 122

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 123 SWQDLKD 129


>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/66 (57%), Positives = 41/66 (62%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGY+FDGHRLRVELAHGG                         S+YRVL+TGLPSSAS
Sbjct: 64  GRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/66 (57%), Positives = 41/66 (62%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGY+FDGHRLRVELAHGG                         S+YRVL+TGLPSSAS
Sbjct: 64  GRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/66 (57%), Positives = 41/66 (62%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGY+FDGHRLRVELAHGG                         S+YRVL+TGLPSSAS
Sbjct: 64  GRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


>ref|XP_006375743.1| hypothetical protein POPTR_0013s01700g [Populus trichocarpa]
           gi|566198865|ref|XP_002318990.2| hypothetical protein
           POPTR_0013s01700g [Populus trichocarpa]
           gi|550324708|gb|ERP53540.1| hypothetical protein
           POPTR_0013s01700g [Populus trichocarpa]
           gi|550324709|gb|EEE94913.2| hypothetical protein
           POPTR_0013s01700g [Populus trichocarpa]
          Length = 296

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/66 (59%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDG RLRVELAHGG                         SDYRVL+TGLPSSAS
Sbjct: 63  GRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSAS 122

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 123 WQDLKD 128


>ref|XP_006375742.1| hypothetical protein POPTR_0013s01700g [Populus trichocarpa]
           gi|550324707|gb|ERP53539.1| hypothetical protein
           POPTR_0013s01700g [Populus trichocarpa]
          Length = 260

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/66 (59%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDG RLRVELAHGG                         SDYRVL+TGLPSSAS
Sbjct: 63  GRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSAS 122

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 123 WQDLKD 128


>ref|XP_004984425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X2 [Setaria
           italica]
          Length = 295

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/66 (57%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDGHRLRVE AHGG                         S+YRVL+TGLPSSAS
Sbjct: 76  GRDGYNFDGHRLRVEPAHGGRGNASSHDRGSGGFGGGARRGVSRHSEYRVLVTGLPSSAS 135

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 136 WQDLKD 141


>ref|XP_004984424.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Setaria
           italica]
          Length = 297

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/66 (57%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDGHRLRVE AHGG                         S+YRVL+TGLPSSAS
Sbjct: 76  GRDGYNFDGHRLRVEPAHGGRGNASSHDRGSGGFGGGARRGVSRHSEYRVLVTGLPSSAS 135

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 136 WQDLKD 141


>ref|XP_004962313.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X2 [Setaria
           italica]
          Length = 268

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDGHRLRVELAHGG                         SDYRV++TGLPSSA
Sbjct: 63  YGRDGYNFDGHRLRVELAHGG---RGPSFDRSSSHNSVGRRGATRRSDYRVMVTGLPSSA 119

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 120 SWQDLKD 126


>ref|XP_004962312.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Setaria
           italica]
          Length = 279

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDGHRLRVELAHGG                         SDYRV++TGLPSSA
Sbjct: 63  YGRDGYNFDGHRLRVELAHGG---RGPSFDRSSSHNSVGRRGATRRSDYRVMVTGLPSSA 119

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 120 SWQDLKD 126


>gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
           bicolor]
          Length = 237

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDGHRLRVELAHGG                         SDYRV++TGLPSSA
Sbjct: 63  YGRDGYNFDGHRLRVELAHGG--RGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 121 SWQDLKD 127


>gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
           bicolor]
          Length = 278

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDGHRLRVELAHGG                         SDYRV++TGLPSSA
Sbjct: 63  YGRDGYNFDGHRLRVELAHGG--RGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 121 SWQDLKD 127


>gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
           bicolor]
          Length = 255

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDGHRLRVELAHGG                         SDYRV++TGLPSSA
Sbjct: 63  YGRDGYNFDGHRLRVELAHGG--RGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 121 SWQDLKD 127


>ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223548402|gb|EEF49893.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 300

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/66 (59%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDG RLRVELAHGG                         SDYRVL+TGLPSSAS
Sbjct: 101 GRDGYNFDGCRLRVELAHGGRRHSSPGDRYSSYSGRSGSRGPSRRSDYRVLVTGLPSSAS 160

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 161 WQDLKD 166


>ref|NP_001151386.1| LOC100285019 [Zea mays] gi|195646352|gb|ACG42644.1|
           pre-mRNA-splicing factor SF2 [Zea mays]
          Length = 275

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/67 (58%), Positives = 42/67 (62%)
 Frame = -3

Query: 202 HGRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSA 23
           +GRDGYNFDGHRLRVELAHGG                         SDYRV++TGLPSSA
Sbjct: 62  YGRDGYNFDGHRLRVELAHGG--RGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 119

Query: 22  SWQDLKD 2
           SWQDLKD
Sbjct: 120 SWQDLKD 126


>ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
           gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa
           Japonica Group]
          Length = 264

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/66 (57%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDGHRLRVE AHGG                         S+YRVL+TGLPSSAS
Sbjct: 64  GRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


>gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
           Japonica Group] gi|215692748|dbj|BAG88168.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218192809|gb|EEC75236.1| hypothetical protein
           OsI_11526 [Oryza sativa Indica Group]
           gi|222624911|gb|EEE59043.1| hypothetical protein
           OsJ_10806 [Oryza sativa Japonica Group]
          Length = 286

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/66 (57%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 GRDGYNFDGHRLRVELAHGGXXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLITGLPSSAS 20
           GRDGYNFDGHRLRVE AHGG                         S+YRVL+TGLPSSAS
Sbjct: 64  GRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSAS 123

Query: 19  WQDLKD 2
           WQDLKD
Sbjct: 124 WQDLKD 129


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