BLASTX nr result
ID: Akebia24_contig00029912
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00029912 (300 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,... 59 7e-07 ref|XP_002300356.2| hypothetical protein POPTR_0001s37230g [Popu... 58 1e-06 ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313... 58 1e-06 emb|CBI28407.3| unnamed protein product [Vitis vinifera] 58 1e-06 ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 58 1e-06 ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobr... 57 3e-06 ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|5087015... 57 3e-06 ref|XP_002316761.1| hypothetical protein POPTR_0011s09050g [Popu... 57 3e-06 ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobr... 57 4e-06 ref|XP_004293449.1| PREDICTED: uncharacterized protein LOC101314... 57 4e-06 ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prun... 56 6e-06 >ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 484 Score = 58.9 bits (141), Expect = 7e-07 Identities = 29/54 (53%), Positives = 37/54 (68%) Frame = +3 Query: 6 YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYVGYNLTGRQS 167 YGGGS YG PT S S DGS SFGYGL ++ SD + ++ GYVGY++ RQ+ Sbjct: 419 YGGGSDYGDPTWRSSNSERDGSGSFGYGLGNATSDASVKNSPGYVGYSVNKRQT 472 >ref|XP_002300356.2| hypothetical protein POPTR_0001s37230g [Populus trichocarpa] gi|550349075|gb|EEE85161.2| hypothetical protein POPTR_0001s37230g [Populus trichocarpa] Length = 484 Score = 58.2 bits (139), Expect = 1e-06 Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = +3 Query: 6 YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYVG-YNLTGRQS 167 Y GSVYG T S T LDG SFGYGL D SD+T +S GY+G Y +T RQS Sbjct: 418 YRSGSVYGDSTWQSATPELDGCGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQS 472 >ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313871 [Fragaria vesca subsp. vesca] Length = 473 Score = 58.2 bits (139), Expect = 1e-06 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Frame = +3 Query: 3 FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQ--SGI 173 FY GGSVYG PT S S DGS FGYGL + SD++ +S G+V GY++ RQ +GI Sbjct: 412 FYNGGSVYGDPTWRSSNSERDGSGPFGYGLGSAASDVSAKSSPGFVGGYSVNKRQPNTGI 471 Query: 174 AA 179 AA Sbjct: 472 AA 473 >emb|CBI28407.3| unnamed protein product [Vitis vinifera] Length = 401 Score = 58.2 bits (139), Expect = 1e-06 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Frame = +3 Query: 3 FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173 FY GGSVYG T + DGS SFGYGL ++ SD+ +S GYV GY++T RQS GI Sbjct: 340 FYSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGI 399 Query: 174 AA 179 AA Sbjct: 400 AA 401 >ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera] Length = 478 Score = 58.2 bits (139), Expect = 1e-06 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Frame = +3 Query: 3 FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173 FY GGSVYG T + DGS SFGYGL ++ SD+ +S GYV GY++T RQS GI Sbjct: 417 FYSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGI 476 Query: 174 AA 179 AA Sbjct: 477 AA 478 >ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobroma cacao] gi|508701534|gb|EOX93430.1| RNA-binding family protein isoform 3 [Theobroma cacao] Length = 390 Score = 57.0 bits (136), Expect = 3e-06 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%) Frame = +3 Query: 6 YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GIA 176 YGG SVYG T + TS DGS SFGYGL + SD++ +S GYV GY++ RQS GIA Sbjct: 330 YGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRGIA 389 >ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|508701532|gb|EOX93428.1| HnRNP isoform 1 [Theobroma cacao] Length = 477 Score = 57.0 bits (136), Expect = 3e-06 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%) Frame = +3 Query: 6 YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GIA 176 YGG SVYG T + TS DGS SFGYGL + SD++ +S GYV GY++ RQS GIA Sbjct: 417 YGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRGIA 476 >ref|XP_002316761.1| hypothetical protein POPTR_0011s09050g [Populus trichocarpa] gi|566194519|ref|XP_006377630.1| hypothetical protein POPTR_0011s09050g [Populus trichocarpa] gi|222859826|gb|EEE97373.1| hypothetical protein POPTR_0011s09050g [Populus trichocarpa] gi|550327973|gb|ERP55427.1| hypothetical protein POPTR_0011s09050g [Populus trichocarpa] Length = 478 Score = 57.0 bits (136), Expect = 3e-06 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%) Frame = +3 Query: 6 YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYVG-YNLTGRQS--GIA 176 Y GSVYG T + LDGS SFGYGL D SD+T +S GY+G Y +T RQS GIA Sbjct: 418 YRSGSVYGDSTWRTAIPELDGSGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQSNRGIA 477 >ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobroma cacao] gi|508701533|gb|EOX93429.1| RNA-binding family protein isoform 2 [Theobroma cacao] Length = 391 Score = 56.6 bits (135), Expect = 4e-06 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +3 Query: 6 YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS 167 YGG SVYG T + TS DGS SFGYGL + SD++ +S GYV GY++ RQS Sbjct: 330 YGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQS 384 >ref|XP_004293449.1| PREDICTED: uncharacterized protein LOC101314729 [Fragaria vesca subsp. vesca] Length = 471 Score = 56.6 bits (135), Expect = 4e-06 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 3/62 (4%) Frame = +3 Query: 3 FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173 FY GSVYG PT S S DG FGYGL + SD++ +S GYV GY++ RQS GI Sbjct: 410 FYSSGSVYGDPTWRSSNSERDGPGPFGYGLGSAASDVSAKSSPGYVGGYSVNKRQSNTGI 469 Query: 174 AA 179 AA Sbjct: 470 AA 471 >ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prunus persica] gi|462411470|gb|EMJ16519.1| hypothetical protein PRUPE_ppa005132mg [Prunus persica] Length = 476 Score = 55.8 bits (133), Expect = 6e-06 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 3/62 (4%) Frame = +3 Query: 3 FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173 FY G SVYG PT S S +GS FGYGL + SD++ +S GYV GY++ RQS GI Sbjct: 415 FYNGNSVYGDPTWRSSNSEREGSVPFGYGLGGATSDVSAKSSPGYVGGYSVNKRQSNTGI 474 Query: 174 AA 179 AA Sbjct: 475 AA 476