BLASTX nr result

ID: Akebia24_contig00029912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00029912
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,...    59   7e-07
ref|XP_002300356.2| hypothetical protein POPTR_0001s37230g [Popu...    58   1e-06
ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313...    58   1e-06
emb|CBI28407.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246...    58   1e-06
ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobr...    57   3e-06
ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|5087015...    57   3e-06
ref|XP_002316761.1| hypothetical protein POPTR_0011s09050g [Popu...    57   3e-06
ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobr...    57   4e-06
ref|XP_004293449.1| PREDICTED: uncharacterized protein LOC101314...    57   4e-06
ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prun...    56   6e-06

>ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223528341|gb|EEF30383.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 484

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = +3

Query: 6   YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYVGYNLTGRQS 167
           YGGGS YG PT  S  S  DGS SFGYGL ++ SD + ++  GYVGY++  RQ+
Sbjct: 419 YGGGSDYGDPTWRSSNSERDGSGSFGYGLGNATSDASVKNSPGYVGYSVNKRQT 472


>ref|XP_002300356.2| hypothetical protein POPTR_0001s37230g [Populus trichocarpa]
           gi|550349075|gb|EEE85161.2| hypothetical protein
           POPTR_0001s37230g [Populus trichocarpa]
          Length = 484

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 6   YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYVG-YNLTGRQS 167
           Y  GSVYG  T  S T  LDG  SFGYGL D  SD+T +S  GY+G Y +T RQS
Sbjct: 418 YRSGSVYGDSTWQSATPELDGCGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQS 472


>ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313871 [Fragaria vesca
           subsp. vesca]
          Length = 473

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = +3

Query: 3   FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQ--SGI 173
           FY GGSVYG PT  S  S  DGS  FGYGL  + SD++ +S  G+V GY++  RQ  +GI
Sbjct: 412 FYNGGSVYGDPTWRSSNSERDGSGPFGYGLGSAASDVSAKSSPGFVGGYSVNKRQPNTGI 471

Query: 174 AA 179
           AA
Sbjct: 472 AA 473


>emb|CBI28407.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = +3

Query: 3   FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173
           FY GGSVYG  T     +  DGS SFGYGL ++ SD+  +S  GYV GY++T RQS  GI
Sbjct: 340 FYSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGI 399

Query: 174 AA 179
           AA
Sbjct: 400 AA 401


>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
          Length = 478

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = +3

Query: 3   FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173
           FY GGSVYG  T     +  DGS SFGYGL ++ SD+  +S  GYV GY++T RQS  GI
Sbjct: 417 FYSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGI 476

Query: 174 AA 179
           AA
Sbjct: 477 AA 478


>ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobroma cacao]
           gi|508701534|gb|EOX93430.1| RNA-binding family protein
           isoform 3 [Theobroma cacao]
          Length = 390

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = +3

Query: 6   YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GIA 176
           YGG SVYG  T  + TS  DGS SFGYGL  + SD++ +S  GYV GY++  RQS  GIA
Sbjct: 330 YGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRGIA 389


>ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|508701532|gb|EOX93428.1| HnRNP
           isoform 1 [Theobroma cacao]
          Length = 477

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = +3

Query: 6   YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GIA 176
           YGG SVYG  T  + TS  DGS SFGYGL  + SD++ +S  GYV GY++  RQS  GIA
Sbjct: 417 YGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRGIA 476


>ref|XP_002316761.1| hypothetical protein POPTR_0011s09050g [Populus trichocarpa]
           gi|566194519|ref|XP_006377630.1| hypothetical protein
           POPTR_0011s09050g [Populus trichocarpa]
           gi|222859826|gb|EEE97373.1| hypothetical protein
           POPTR_0011s09050g [Populus trichocarpa]
           gi|550327973|gb|ERP55427.1| hypothetical protein
           POPTR_0011s09050g [Populus trichocarpa]
          Length = 478

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
 Frame = +3

Query: 6   YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYVG-YNLTGRQS--GIA 176
           Y  GSVYG  T  +    LDGS SFGYGL D  SD+T +S  GY+G Y +T RQS  GIA
Sbjct: 418 YRSGSVYGDSTWRTAIPELDGSGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQSNRGIA 477


>ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508701533|gb|EOX93429.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 391

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +3

Query: 6   YGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS 167
           YGG SVYG  T  + TS  DGS SFGYGL  + SD++ +S  GYV GY++  RQS
Sbjct: 330 YGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQS 384


>ref|XP_004293449.1| PREDICTED: uncharacterized protein LOC101314729 [Fragaria vesca
           subsp. vesca]
          Length = 471

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = +3

Query: 3   FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173
           FY  GSVYG PT  S  S  DG   FGYGL  + SD++ +S  GYV GY++  RQS  GI
Sbjct: 410 FYSSGSVYGDPTWRSSNSERDGPGPFGYGLGSAASDVSAKSSPGYVGGYSVNKRQSNTGI 469

Query: 174 AA 179
           AA
Sbjct: 470 AA 471


>ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prunus persica]
           gi|462411470|gb|EMJ16519.1| hypothetical protein
           PRUPE_ppa005132mg [Prunus persica]
          Length = 476

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +3

Query: 3   FYGGGSVYGAPTRLSRTSVLDGSDSFGYGLRDSISDITDESYSGYV-GYNLTGRQS--GI 173
           FY G SVYG PT  S  S  +GS  FGYGL  + SD++ +S  GYV GY++  RQS  GI
Sbjct: 415 FYNGNSVYGDPTWRSSNSEREGSVPFGYGLGGATSDVSAKSSPGYVGGYSVNKRQSNTGI 474

Query: 174 AA 179
           AA
Sbjct: 475 AA 476


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