BLASTX nr result

ID: Akebia24_contig00029865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00029865
         (322 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308213.1| hypothetical protein POPTR_0006s09890g [Popu...    62   6e-08
ref|XP_002322967.2| hypothetical protein POPTR_0016s12020g [Popu...    62   1e-07

>ref|XP_002308213.1| hypothetical protein POPTR_0006s09890g [Populus trichocarpa]
           gi|222854189|gb|EEE91736.1| hypothetical protein
           POPTR_0006s09890g [Populus trichocarpa]
          Length = 129

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = -3

Query: 281 MSRKPS-----NPNINDKPTVSPKHSNDTRVPGNKKKVAGICCFRLPKTPGFSPVKFV 123
           MSRK S     +P++NDKPT+  KH + TRV GN+KK+AG   FRLP+T  FSP + +
Sbjct: 1   MSRKASKRVSFSPDVNDKPTIFLKHGSGTRVGGNRKKIAGTLTFRLPRTSKFSPARLL 58


>ref|XP_002322967.2| hypothetical protein POPTR_0016s12020g [Populus trichocarpa]
           gi|550321314|gb|EEF04728.2| hypothetical protein
           POPTR_0016s12020g [Populus trichocarpa]
          Length = 129

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = -3

Query: 281 MSRKPS-----NPNINDKPTVSPKHSNDTRVPGNKKKVAGICCFRLPKTPGFSPVKFV 123
           MSRK S     +P+ NDKPT+  KH + TRV GN+KK+AGI  FRLP+T  FSP + +
Sbjct: 1   MSRKASKRLSFSPDENDKPTIFLKHGSGTRVGGNRKKIAGIFSFRLPRTSKFSPARLL 58


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