BLASTX nr result

ID: Akebia24_contig00029838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00029838
         (312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162539.1| PREDICTED: uncharacterized protein LOC101226...    67   2e-09
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    66   6e-09
emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]    65   1e-08
ref|XP_006388324.1| hypothetical protein POPTR_0229s00250g [Popu...    61   1e-07
gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprot...    57   2e-06
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...    57   3e-06
emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]    57   3e-06
ref|XP_007048014.1| Gag-pol polyprotein-like protein [Theobroma ...    56   5e-06

>ref|XP_004162539.1| PREDICTED: uncharacterized protein LOC101226535 [Cucumis sativus]
          Length = 311

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
 Frame = -3

Query: 196 EGEHLSCIIRNLLPIQHIDPST-----RHSLFRTTCKV*GKLCQLIIDSGSSENIISSHM 32
           EGE LSC+I+ +L    + P T     RHSLFRT C + GKLC +IIDSGSSE+I+ S +
Sbjct: 248 EGEQLSCVIQRIL----LTPKTETHPRRHSLFRTRCTINGKLCNVIIDSGSSESIVYSKL 303

Query: 31  VDALKLPT 8
           V ALK  T
Sbjct: 304 VQALKPQT 311


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101214124 [Cucumis sativus]
          Length = 586

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -3

Query: 196 EGEHLSCIIRNLL--PIQHIDPSTRHSLFRTTCKV*GKLCQLIIDSGSSENIISSHMVDA 23
           EG+ LSC+I+ +L  P     P  R+SLFRT C + GK+CQ+IIDSGSSEN++S  +V A
Sbjct: 375 EGDQLSCVIQRILFTPTAGQIPQ-RNSLFRTRCTINGKVCQVIIDSGSSENLVSKKLVSA 433

Query: 22  LKLPT 8
           L L T
Sbjct: 434 LNLKT 438


>emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]
          Length = 1464

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -3

Query: 193 GEHLSCII-RNLLPIQHIDPSTRHSLFRTTCKV*GKLCQLIIDSGSSENIISSHMVDALK 17
           GE ++CI+ R LL ++  D S RH +FRT C +  K+C +IIDSGSSEN +S  +V AL 
Sbjct: 722 GEEVTCIVQRLLLTLKKSDDSQRHKIFRTQCTIRNKVCNVIIDSGSSENFVSKALVKALN 781

Query: 16  LPTTQ 2
           L T +
Sbjct: 782 LKTKE 786


>ref|XP_006388324.1| hypothetical protein POPTR_0229s00250g [Populus trichocarpa]
           gi|550310003|gb|ERP47238.1| hypothetical protein
           POPTR_0229s00250g [Populus trichocarpa]
          Length = 315

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = -3

Query: 196 EGEHLSCII---RNLLPIQHIDPSTRHSLFRTTCKV*GKLCQLIIDSGSSENIISSHMVD 26
           +GE LSC +   R LL  +  D S  H++FRT C V  K+C +IIDSGSSENI+S +MV 
Sbjct: 231 DGELLSCSLVVHRLLLAPKQTDQSQHHNIFRTRCTVNRKVCDVIIDSGSSENIVSKNMVT 290

Query: 25  ALKLPT 8
            L L T
Sbjct: 291 KLGLKT 296


>gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 587

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 43/71 (60%)
 Frame = -3

Query: 217 KAQFKKFEGEHLSCIIRNLLPIQHIDPSTRHSLFRTTCKV*GKLCQLIIDSGSSENIISS 38
           + +F + E   +  ++   + +   +   R +LFRT C +  K+C LI+D GSSEN++S 
Sbjct: 192 EVEFAEEESNEMINLVLQRILLSSKEEGQRRNLFRTRCSINDKVCNLIVDIGSSENLVSQ 251

Query: 37  HMVDALKLPTT 5
            +V+ LKLPTT
Sbjct: 252 KLVEYLKLPTT 262


>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = -3

Query: 196 EGEHLSCIIRNLLPIQHIDPST-RHSLFRTTCKV*GKLCQLIIDSGSSENIISSHMVDAL 20
           +GE +SC+I+ LL     + +  RH LF+T C + G++C +IIDSGSSEN ++  +V  L
Sbjct: 522 DGERVSCVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIIDSGSSENFVAKKLVTVL 581

Query: 19  KL 14
            L
Sbjct: 582 NL 583


>emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]
          Length = 611

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = -3

Query: 232 TKTKLKAQFKKFEGEHLSCIIRNLL--PIQHIDPSTRHSLFRTTCKV*GKLCQLIIDSGS 59
           T  K    +   +G+ +  +++++L  P+Q  +     ++FRT+C   GKLC  IID GS
Sbjct: 218 TGGKTVQTYNNAQGKKIDEVLQSMLAPPVQEKNDWLHKNIFRTSCTSGGKLCNFIIDGGS 277

Query: 58  SENIISSHMVDALKL 14
           SEN++S  MVD LKL
Sbjct: 278 SENLVSQEMVDKLKL 292


>ref|XP_007048014.1| Gag-pol polyprotein-like protein [Theobroma cacao]
           gi|508700275|gb|EOX92171.1| Gag-pol polyprotein-like
           protein [Theobroma cacao]
          Length = 399

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
 Frame = -3

Query: 247 EKEFITKTKLKAQFKKFEGEHL---------SCIIR---NLLPIQHIDPSTRHSLFRTTC 104
           E+++    KLK  + +++ E +         + I+R   N   +   +   RH++F T C
Sbjct: 298 EEDYANWEKLKPVYDEYDDEEIEEVSADHGEALIVRRNLNTAMMTKDESWFRHNIFYTRC 357

Query: 103 KV*GKLCQLIIDSGSSENIISSHMVDALKLPT 8
              GK+C +IIDSGS EN+I+++MV+ LKLPT
Sbjct: 358 TSQGKVCNVIIDSGSYENVIANYMVEKLKLPT 389


Top