BLASTX nr result
ID: Akebia24_contig00029513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00029513
(271 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 90 3e-16
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 86 5e-15
gb|ABW81094.1| RT6non-ltr [Cleome spinosa] 82 6e-14
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 82 6e-14
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 82 6e-14
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 82 8e-14
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 82 8e-14
ref|XP_006295581.1| hypothetical protein CARUB_v10024689mg, part... 82 1e-13
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 80 2e-13
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 80 2e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 80 2e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 80 2e-13
dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana] 80 3e-13
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 79 5e-13
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 79 7e-13
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 79 7e-13
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 79 7e-13
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 79 9e-13
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 78 1e-12
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 78 1e-12
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
S+NG L GYF+G++G RQGDPLSPYLF++ M+ LS +LD+ +S+HPK P I+H
Sbjct: 88 SINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITH 147
Query: 90 LCFADDLMICFKGNVKS 40
L FADD+MI G +S
Sbjct: 148 LAFADDIMIFTSGETRS 164
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
+V+GSL GYF+G KG RQGDPLSP LFV+ M+ LS LL+ + G+I HPK E +IS
Sbjct: 634 NVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISS 693
Query: 90 LCFADDLMICFKGNVKS 40
L FADDLMI + G S
Sbjct: 694 LAFADDLMIFYDGKASS 710
>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
Length = 459
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
++NG L G F+GK+G RQGDPLSPYLF++ M+ LS LD+ +G + +H K P ++H
Sbjct: 5 NINGELTGLFKGKRGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTH 64
Query: 90 LCFADDLMICFKGNVKS 40
L FADDL+I K + +S
Sbjct: 65 LIFADDLVIFSKASRQS 81
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/76 (55%), Positives = 49/76 (64%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNGS G+F+ KG RQGDPLSPYLFVL M+ S LL + G I HPK + ISHL
Sbjct: 637 VNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHL 696
Query: 87 CFADDLMICFKGNVKS 40
FADD+M+ F G S
Sbjct: 697 MFADDVMVFFDGGSSS 712
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/77 (55%), Positives = 50/77 (64%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
SVNG G+F+ KG RQGDPLSPYLFVL M+ S LL+ + G I HPK + ISH
Sbjct: 613 SVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLSISH 672
Query: 90 LCFADDLMICFKGNVKS 40
L FADD+MI F G S
Sbjct: 673 LMFADDVMIFFDGGSSS 689
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 82.0 bits (201), Expect = 8e-14
Identities = 42/76 (55%), Positives = 49/76 (64%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNGS G+F+ KG RQGDPLSPYLFVL M+ S LL + G I HPK + ISHL
Sbjct: 637 VNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHL 696
Query: 87 CFADDLMICFKGNVKS 40
FADD+M+ F G S
Sbjct: 697 MFADDVMVFFDGGSSS 712
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 82.0 bits (201), Expect = 8e-14
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L G+F+ +G RQG LSPYLFV+ MD LS LLDK V +G I HP K ++HL
Sbjct: 195 VNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHL 254
Query: 87 CFADDLMICFKGNVKS 40
FADDLMI G +S
Sbjct: 255 SFADDLMILTDGQCRS 270
>ref|XP_006295581.1| hypothetical protein CARUB_v10024689mg, partial [Capsella rubella]
gi|482564289|gb|EOA28479.1| hypothetical protein
CARUB_v10024689mg, partial [Capsella rubella]
Length = 628
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
+VN L GYF+ +G RQG LSPYLFV+ MD LS LLDK +G HP+ KE ++H
Sbjct: 505 NVNAELAGYFQSSRGLRQGCSLSPYLFVICMDVLSKLLDKAAGVGQFGFHPRCKELGLTH 564
Query: 90 LCFADDLMICFKGNVKS 40
L FADDLM+ G +S
Sbjct: 565 LSFADDLMVLSDGKTRS 581
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/77 (55%), Positives = 49/77 (63%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
SVNG+ G+F KG RQGDPLSPYLFVL M+ S LL + G I HPK + ISH
Sbjct: 495 SVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISH 554
Query: 90 LCFADDLMICFKGNVKS 40
L FADD+MI F G S
Sbjct: 555 LMFADDVMIFFDGGSSS 571
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
S+NG G+F+ KG RQGDPLSPYLFVL M++ S LL + G I HPK ISH
Sbjct: 635 SINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISH 694
Query: 90 LCFADDLMICFKG 52
L FADD+MI F G
Sbjct: 695 LMFADDVMIFFDG 707
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/77 (55%), Positives = 49/77 (63%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
SVNG+ G+F KG RQGDPLSPYLFVL M+ S LL + G I HPK + ISH
Sbjct: 495 SVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISH 554
Query: 90 LCFADDLMICFKGNVKS 40
L FADD+MI F G S
Sbjct: 555 LMFADDVMIFFDGGSSS 571
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L GYF +G RQG LSPYLFV+ MD LS +LDK HP+ K ++HL
Sbjct: 363 VNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHL 422
Query: 87 CFADDLMICFKGNVKS--------R*FAKELGL 13
CFADDLMI G ++S FA +LGL
Sbjct: 423 CFADDLMILTDGKIRSVDGIVKVLNQFAAKLGL 455
>dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]
Length = 422
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -2
Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
SVNG L G+F G+KG RQGDP+SPYLF+++M LS LL + + G +HP P+++H
Sbjct: 31 SVNGELAGFFPGQKGLRQGDPISPYLFIIVMKVLSNLLSQATYEGKFRLHPLCDSPRLTH 90
Query: 90 LCFADDLMI 64
L FAD L+I
Sbjct: 91 LLFADALLI 99
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L GYF +G RQG LSPYLFV+ M+ LS +LD+ HPK K ++HL
Sbjct: 559 VNGELAGYFRSARGIRQGCALSPYLFVISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHL 618
Query: 87 CFADDLMICFKGNVKS 40
CFADDLMI G V+S
Sbjct: 619 CFADDLMILTDGKVRS 634
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/76 (51%), Positives = 48/76 (63%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L GYF+ +G RQG LSPYLFV+ MD LS +LDK HPK K ++HL
Sbjct: 642 VNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHL 701
Query: 87 CFADDLMICFKGNVKS 40
FADDLM+ G ++S
Sbjct: 702 SFADDLMVLSDGKIRS 717
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/76 (52%), Positives = 49/76 (64%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
+NG G+F KG RQGDP+SPYLFVL M+ S LL + G I+ HPK + +ISHL
Sbjct: 533 LNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHL 592
Query: 87 CFADDLMICFKGNVKS 40
FADD+MI F G S
Sbjct: 593 MFADDVMIFFDGKSSS 608
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/76 (51%), Positives = 49/76 (64%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L GYF+ K+G RQG LSPYLFV+ MD LS +LDK + HPK + ++HL
Sbjct: 289 VNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHL 348
Query: 87 CFADDLMICFKGNVKS 40
FADDLM+ G +S
Sbjct: 349 SFADDLMVLSDGKTRS 364
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 78.6 bits (192), Expect = 9e-13
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L G+F ++G RQG LSPYL+V+ M+ LS +LDK IS HP+ + ++HL
Sbjct: 789 VNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHL 848
Query: 87 CFADDLMICFKGNVKS 40
CFADD+M+ G KS
Sbjct: 849 CFADDIMVFSDGTSKS 864
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/75 (50%), Positives = 50/75 (66%)
Frame = -2
Query: 264 NGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHLC 85
NG L G+F GKKG RQGDP+S +LFVL+MD L+ LD G +HPK P I+HL
Sbjct: 184 NGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLS 243
Query: 84 FADDLMICFKGNVKS 40
FADD+++ G++ S
Sbjct: 244 FADDILVFCDGSLSS 258
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/76 (50%), Positives = 49/76 (64%)
Frame = -2
Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
VNG L G+F K+G RQG LSPYLFV+ M+ LS ++D I HPK K+ ++HL
Sbjct: 215 VNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHL 274
Query: 87 CFADDLMICFKGNVKS 40
CFADDLM+ G +S
Sbjct: 275 CFADDLMVFIDGQQRS 290