BLASTX nr result

ID: Akebia24_contig00029513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00029513
         (271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   90   3e-16
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    86   5e-15
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             82   6e-14
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    82   6e-14
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    82   6e-14
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    82   8e-14
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                82   8e-14
ref|XP_006295581.1| hypothetical protein CARUB_v10024689mg, part...    82   1e-13
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    80   2e-13
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        80   2e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            80   2e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    80   2e-13
dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]         80   3e-13
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    79   5e-13
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    79   7e-13
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    79   7e-13
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                79   7e-13
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    79   9e-13
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    78   1e-12
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 78   1e-12

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           S+NG L GYF+G++G RQGDPLSPYLF++ M+ LS +LD+      +S+HPK   P I+H
Sbjct: 88  SINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITH 147

Query: 90  LCFADDLMICFKGNVKS 40
           L FADD+MI   G  +S
Sbjct: 148 LAFADDIMIFTSGETRS 164


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           +V+GSL GYF+G KG RQGDPLSP LFV+ M+ LS LL+ +   G+I  HPK  E +IS 
Sbjct: 634 NVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISS 693

Query: 90  LCFADDLMICFKGNVKS 40
           L FADDLMI + G   S
Sbjct: 694 LAFADDLMIFYDGKASS 710


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 38/77 (49%), Positives = 54/77 (70%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           ++NG L G F+GK+G RQGDPLSPYLF++ M+ LS  LD+   +G + +H K   P ++H
Sbjct: 5   NINGELTGLFKGKRGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTH 64

Query: 90  LCFADDLMICFKGNVKS 40
           L FADDL+I  K + +S
Sbjct: 65  LIFADDLVIFSKASRQS 81


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 42/76 (55%), Positives = 49/76 (64%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNGS  G+F+  KG RQGDPLSPYLFVL M+  S LL  +   G I  HPK  +  ISHL
Sbjct: 637 VNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHL 696

Query: 87  CFADDLMICFKGNVKS 40
            FADD+M+ F G   S
Sbjct: 697 MFADDVMVFFDGGSSS 712


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/77 (55%), Positives = 50/77 (64%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           SVNG   G+F+  KG RQGDPLSPYLFVL M+  S LL+ +   G I  HPK  +  ISH
Sbjct: 613 SVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLSISH 672

Query: 90  LCFADDLMICFKGNVKS 40
           L FADD+MI F G   S
Sbjct: 673 LMFADDVMIFFDGGSSS 689


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/76 (55%), Positives = 49/76 (64%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNGS  G+F+  KG RQGDPLSPYLFVL M+  S LL  +   G I  HPK  +  ISHL
Sbjct: 637 VNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHL 696

Query: 87  CFADDLMICFKGNVKS 40
            FADD+M+ F G   S
Sbjct: 697 MFADDVMVFFDGGSSS 712


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNG L G+F+  +G RQG  LSPYLFV+ MD LS LLDK V +G I  HP  K   ++HL
Sbjct: 195 VNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHL 254

Query: 87  CFADDLMICFKGNVKS 40
            FADDLMI   G  +S
Sbjct: 255 SFADDLMILTDGQCRS 270


>ref|XP_006295581.1| hypothetical protein CARUB_v10024689mg, partial [Capsella rubella]
           gi|482564289|gb|EOA28479.1| hypothetical protein
           CARUB_v10024689mg, partial [Capsella rubella]
          Length = 628

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           +VN  L GYF+  +G RQG  LSPYLFV+ MD LS LLDK   +G    HP+ KE  ++H
Sbjct: 505 NVNAELAGYFQSSRGLRQGCSLSPYLFVICMDVLSKLLDKAAGVGQFGFHPRCKELGLTH 564

Query: 90  LCFADDLMICFKGNVKS 40
           L FADDLM+   G  +S
Sbjct: 565 LSFADDLMVLSDGKTRS 581


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/77 (55%), Positives = 49/77 (63%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           SVNG+  G+F   KG RQGDPLSPYLFVL M+  S LL  +   G I  HPK  +  ISH
Sbjct: 495 SVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISH 554

Query: 90  LCFADDLMICFKGNVKS 40
           L FADD+MI F G   S
Sbjct: 555 LMFADDVMIFFDGGSSS 571


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/73 (56%), Positives = 48/73 (65%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           S+NG   G+F+  KG RQGDPLSPYLFVL M++ S LL  +   G I  HPK     ISH
Sbjct: 635 SINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISH 694

Query: 90  LCFADDLMICFKG 52
           L FADD+MI F G
Sbjct: 695 LMFADDVMIFFDG 707


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/77 (55%), Positives = 49/77 (63%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           SVNG+  G+F   KG RQGDPLSPYLFVL M+  S LL  +   G I  HPK  +  ISH
Sbjct: 495 SVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISH 554

Query: 90  LCFADDLMICFKGNVKS 40
           L FADD+MI F G   S
Sbjct: 555 LMFADDVMIFFDGGSSS 571


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNG L GYF   +G RQG  LSPYLFV+ MD LS +LDK         HP+ K   ++HL
Sbjct: 363 VNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHL 422

Query: 87  CFADDLMICFKGNVKS--------R*FAKELGL 13
           CFADDLMI   G ++S          FA +LGL
Sbjct: 423 CFADDLMILTDGKIRSVDGIVKVLNQFAAKLGL 455


>dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]
          Length = 422

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/69 (52%), Positives = 49/69 (71%)
 Frame = -2

Query: 270 SVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISH 91
           SVNG L G+F G+KG RQGDP+SPYLF+++M  LS LL +  + G   +HP    P+++H
Sbjct: 31  SVNGELAGFFPGQKGLRQGDPISPYLFIIVMKVLSNLLSQATYEGKFRLHPLCDSPRLTH 90

Query: 90  LCFADDLMI 64
           L FAD L+I
Sbjct: 91  LLFADALLI 99


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/76 (52%), Positives = 48/76 (63%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNG L GYF   +G RQG  LSPYLFV+ M+ LS +LD+         HPK K   ++HL
Sbjct: 559 VNGELAGYFRSARGIRQGCALSPYLFVISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHL 618

Query: 87  CFADDLMICFKGNVKS 40
           CFADDLMI   G V+S
Sbjct: 619 CFADDLMILTDGKVRS 634


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 39/76 (51%), Positives = 48/76 (63%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNG L GYF+  +G RQG  LSPYLFV+ MD LS +LDK         HPK K   ++HL
Sbjct: 642 VNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHL 701

Query: 87  CFADDLMICFKGNVKS 40
            FADDLM+   G ++S
Sbjct: 702 SFADDLMVLSDGKIRS 717


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           +NG   G+F   KG RQGDP+SPYLFVL M+  S LL  +   G I+ HPK  + +ISHL
Sbjct: 533 LNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHL 592

Query: 87  CFADDLMICFKGNVKS 40
            FADD+MI F G   S
Sbjct: 593 MFADDVMIFFDGKSSS 608


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 39/76 (51%), Positives = 49/76 (64%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNG L GYF+ K+G RQG  LSPYLFV+ MD LS +LDK   +     HPK +   ++HL
Sbjct: 289 VNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHL 348

Query: 87  CFADDLMICFKGNVKS 40
            FADDLM+   G  +S
Sbjct: 349 SFADDLMVLSDGKTRS 364


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 37/76 (48%), Positives = 50/76 (65%)
 Frame = -2

Query: 267  VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
            VNG L G+F  ++G RQG  LSPYL+V+ M+ LS +LDK      IS HP+ +   ++HL
Sbjct: 789  VNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHL 848

Query: 87   CFADDLMICFKGNVKS 40
            CFADD+M+   G  KS
Sbjct: 849  CFADDIMVFSDGTSKS 864


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/75 (50%), Positives = 50/75 (66%)
 Frame = -2

Query: 264 NGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHLC 85
           NG L G+F GKKG RQGDP+S +LFVL+MD L+  LD     G   +HPK   P I+HL 
Sbjct: 184 NGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLS 243

Query: 84  FADDLMICFKGNVKS 40
           FADD+++   G++ S
Sbjct: 244 FADDILVFCDGSLSS 258


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 49/76 (64%)
 Frame = -2

Query: 267 VNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFLGTISIHPKFKEPKISHL 88
           VNG L G+F  K+G RQG  LSPYLFV+ M+ LS ++D       I  HPK K+  ++HL
Sbjct: 215 VNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHL 274

Query: 87  CFADDLMICFKGNVKS 40
           CFADDLM+   G  +S
Sbjct: 275 CFADDLMVFIDGQQRS 290


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