BLASTX nr result
ID: Akebia24_contig00029432
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00029432
(979 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi... 232 2e-58
ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A... 224 4e-56
emb|CBI21003.3| unnamed protein product [Vitis vinifera] 219 1e-54
gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis] 219 2e-54
ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [A... 210 8e-52
ref|XP_002309609.2| pentatricopeptide repeat-containing family p... 204 4e-50
ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, par... 201 5e-49
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi... 194 3e-47
ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein... 194 5e-47
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,... 192 1e-46
gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus... 189 1e-45
ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citr... 189 1e-45
ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phas... 183 1e-43
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ... 177 6e-42
ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containi... 152 3e-34
ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidops... 152 3e-34
ref|XP_004301621.1| PREDICTED: pentatricopeptide repeat-containi... 148 4e-33
ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containi... 146 1e-32
ref|XP_002879788.1| pentatricopeptide repeat-containing protein ... 146 1e-32
ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Caps... 139 1e-30
>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 232 bits (592), Expect = 2e-58
Identities = 143/328 (43%), Positives = 195/328 (59%), Gaps = 5/328 (1%)
Frame = +2
Query: 2 RIYVASSSHSPWLLRSYRKSFCSASTLNSQDPVLKEKPISESGISETSDSKTGFFDKPIS 181
R ++ S+ SP L + C S S P + E I E TS+S T F + P
Sbjct: 2 RSAISLSTFSPILRWPFTNPKCVCSV--SIPPAISEPEILEKS---TSESLTHFPEDPNP 56
Query: 182 ETTFPVKPSSKIAFLEEPNLEIGVSDKPTSEGARNAF--TQFQQEISSQDTNTVLNQDRV 355
+ FP K S + +F G S P +++ +Q QE T L+Q+ V
Sbjct: 57 KANFPEKISPESSFP-------GNSSSPYPRYSQDTVPTSQIHQE------TTPLSQNHV 103
Query: 356 IEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCLS 532
I+ LL + +DP L+YFK AE QRGF+RGVDA C+ LHIL+ S ARKLLN+ +S
Sbjct: 104 IDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVS 163
Query: 533 GDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVP 706
GDS P + VD L +KR L+ +F+Y+LN+Y+RA RIE+A +CF+ MI D++P
Sbjct: 164 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 223
Query: 707 GISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYF 886
+ Y NILL ALVR NMIG+ RDLY M+ RG+ D FT+ +M+ ACLKEG+ EEAE+YF
Sbjct: 224 WVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYF 283
Query: 887 RDMKTRGFEFDPVTYNTVILAVCKKPDS 970
R+ K RG + D Y+ +I AVCKKP+S
Sbjct: 284 RETKERGVKLDAGAYSIIIQAVCKKPNS 311
Score = 71.2 bits (173), Expect = 6e-10
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Frame = +2
Query: 446 VDALCITLHILVNSRNVWDARK----LLNQCLSGDSSPCATILVDRLTETSKRCGLNPLL 613
+D C L +VN V + +L C G+ +++ D L K N +
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP---NVVT 541
Query: 614 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 793
+S +++ + G E A + FD+M+ +I P N ++N L + + +ARD K L
Sbjct: 542 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 601
Query: 794 ERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
E G C T + ++ +KEG + A +R+M G + VTY ++I CK
Sbjct: 602 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656
>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
gi|548856757|gb|ERN14585.1| hypothetical protein
AMTR_s00038p00140720 [Amborella trichopoda]
Length = 855
Score = 224 bits (571), Expect = 4e-56
Identities = 117/266 (43%), Positives = 166/266 (62%), Gaps = 6/266 (2%)
Frame = +2
Query: 200 KPSSKIAFLEEPNLEIGVSDKPTSEGARNAF------TQFQQEISSQDTNTVLNQDRVIE 361
+P +L +P S PTS+ R +Q ++IS +NTVL Q+ V+E
Sbjct: 35 QPQISNGYLSQP-CRCTQSPLPTSQFDREILLSLSNTSQIDRQISLSHSNTVLTQEHVVE 93
Query: 362 FLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWDARKLLNQCLSGDS 541
LL+NQ D L+YF+WAE+QRGF+RG++ LC+ LHIL ++++ AR L+ LS +S
Sbjct: 94 VLLSNQTDSKAALRYFRWAERQRGFIRGLEPLCVVLHILARNKDLPAARNLIKHSLSANS 153
Query: 542 SPCATILVDRLTETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYR 721
S A+ +DRL ETS+RC +P +F VLN Y R G + ++ E + R++ + P +
Sbjct: 154 SIGASAFIDRLLETSERCNSHPRVFDLVLNGYTRYGSVTESLETYHRLVSNGVFPSVGCI 213
Query: 722 NILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKT 901
N+LLN LVR N I +A DLY+ M+ERGV DC TLD M+HAC K GK EEAE F++M+
Sbjct: 214 NLLLNKLVRLNFIDEAWDLYREMVERGVDLDCQTLDAMVHACSKGGKLEEAEGLFQEMRI 273
Query: 902 RGFEFDPVTYNTVILAVCKKPDSKTA 979
RG + D V+Y +I A+CKK SK A
Sbjct: 274 RGCKLDSVSYTNIIQALCKKTCSKKA 299
Score = 60.8 bits (146), Expect = 8e-07
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 557 ILVDRLTETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNIL 730
+L ++ + GL L +Y +++ + + G + +A E F+ M + + P S N L
Sbjct: 642 VLALKVRNVMRSRGLQSDLVTYNALIDGFCKRGDMYNAIEIFNEMCEVGLAPNASIYNTL 701
Query: 731 LNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGF 910
+ + A L+KGM E GV CD T ++ LKEG A + +++M ++
Sbjct: 702 MGGYRNECNMEAALKLHKGMKEEGVPCDLATYTTLIDGLLKEGNVILALELYKEMLSQYI 761
Query: 911 EFDPVTYNTVILAVCKKPDSKTA 979
D +TY +I +C + + + A
Sbjct: 762 MPDAITYTVLIRGLCSRGEMENA 784
>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 219 bits (558), Expect = 1e-54
Identities = 114/216 (52%), Positives = 152/216 (70%), Gaps = 3/216 (1%)
Frame = +2
Query: 332 TVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-AR 508
T L+Q+ VI+ LL + +DP L+YFK AE QRGF+RGVDA C+ LHIL+ S AR
Sbjct: 56 TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 115
Query: 509 KLLNQCLSGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDR 682
KLLN+ +SGDS P + VD L +KR L+ +F+Y+LN+Y+RA RIE+A +CF+
Sbjct: 116 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 175
Query: 683 MIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGK 862
MI D++P + Y NILL ALVR NMIG+ RDLY M+ RG+ D FT+ +M+ ACLKEG+
Sbjct: 176 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 235
Query: 863 PEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDS 970
EEAE+YFR+ K RG + D Y+ +I AVCKKP+S
Sbjct: 236 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Score = 71.2 bits (173), Expect = 6e-10
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Frame = +2
Query: 446 VDALCITLHILVNSRNVWDARK----LLNQCLSGDSSPCATILVDRLTETSKRCGLNPLL 613
+D C L +VN V + +L C G+ +++ D L K N +
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP---NVVT 501
Query: 614 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 793
+S +++ + G E A + FD+M+ +I P N ++N L + + +ARD K L
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 561
Query: 794 ERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
E G C T + ++ +KEG + A +R+M G + VTY ++I CK
Sbjct: 562 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616
>gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]
Length = 907
Score = 219 bits (557), Expect = 2e-54
Identities = 133/331 (40%), Positives = 188/331 (56%), Gaps = 5/331 (1%)
Frame = +2
Query: 2 RIYVASSSHSPWLLRSYR--KSFCSASTLNSQDPVLKEKPISESGISETSDSKTGFFDKP 175
R + SS SP L RS+ + C T+ + V+ E P+SE+
Sbjct: 2 RSSITSSPISPLLRRSFLHPRYLCHEFTIPDKS-VISESPVSENA--------------- 45
Query: 176 ISETTFPVKPSSKIAFLEEPNLEIGVSDKPTSEGARNAFTQFQQEISSQDTNTVLNQDRV 355
PS L+E E ++KPTSE N + + S T+ L Q V
Sbjct: 46 --------SPSLATKSLDEFTSESNSAEKPTSEVDPN------RNLCSLSTD--LTQAHV 89
Query: 356 IEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVW-DARKLLNQCLS 532
I LL++++DP LKYFKWAE+ RGF+RGVD+ + LHIL+ S+ A+ LL+ +S
Sbjct: 90 INTLLSHKNDPYSALKYFKWAERMRGFIRGVDSFSVLLHILMGSQETHGSAQSLLSLYVS 149
Query: 533 GDSSPCATILVDRLTETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVP 706
GDS P A + VD L + +KR P +F+Y+LNSY+RA RI DA CF++M+++DI+P
Sbjct: 150 GDSGPSANVFVDHLFDCAKRFEFEPDSRIFNYLLNSYIRANRIRDAVHCFNKMVEHDILP 209
Query: 707 GISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYF 886
+ + NILL AL+R NM +A DL+ M+ RGV D T+ ++M ACLK+ + EEAEKYF
Sbjct: 210 WVPFMNILLTALIRRNMSREALDLHHKMVLRGVFGDRVTVPVLMRACLKKEREEEAEKYF 269
Query: 887 RDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
R+ RG E D Y+ +I A CKKP+ K A
Sbjct: 270 REATVRGIELDAAAYSFLIQAFCKKPNCKVA 300
Score = 73.9 bits (180), Expect = 9e-11
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Frame = +2
Query: 467 LHILVNSRNVWDARKLLNQCLSGDSSPCATILVDRLTETSKRCGL-NPLLFSYVLNSYVR 643
LH L+ + DA KL N+ + CG+ N L++ +LNS
Sbjct: 428 LHGLLKFQKFEDASKLFNEAVE--------------------CGVANTFLYNTLLNSLCN 467
Query: 644 AGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFT 823
G++ +A +D MI D+VP + + ++ R + A +L+ MLER V D FT
Sbjct: 468 EGKVNEACALWDNMISKDVVPNVVSYSSMILCHCRKGALDMAHNLFTEMLERSVKPDVFT 527
Query: 824 LDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
I++ C K+G + A + M TYNT+I +C+
Sbjct: 528 YSILIDGCFKKGDVKRAFNVYEQMMAVNIAPTDYTYNTIINGLCR 572
>ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [Amborella trichopoda]
gi|548856749|gb|ERN14577.1| hypothetical protein
AMTR_s00038p00132760 [Amborella trichopoda]
Length = 757
Score = 210 bits (534), Expect = 8e-52
Identities = 117/287 (40%), Positives = 168/287 (58%)
Frame = +2
Query: 119 SESGISETSDSKTGFFDKPISETTFPVKPSSKIAFLEEPNLEIGVSDKPTSEGARNAFTQ 298
S+S I + S S+ P + P+ P + PN +I D+ S + + +Q
Sbjct: 30 SQSQIPDGSSSQV-----PETPPASPLPPETTPERTPLPNAQI---DEDISL-SHSKTSQ 80
Query: 299 FQQEISSQDTNTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHIL 478
+EI TVL Q+ V+E LLNNQ P LKYF+WA+ QRG++RG++ LCITLHIL
Sbjct: 81 IDREILFSPAKTVLTQEHVVEVLLNNQSHPKASLKYFRWADAQRGYLRGLEPLCITLHIL 140
Query: 479 VNSRNVWDARKLLNQCLSGDSSPCATILVDRLTETSKRCGLNPLLFSYVLNSYVRAGRIE 658
++N+ RKL+ S S P A +D L ETSKRC +P +F VLN Y R G +
Sbjct: 141 ARNKNLPSVRKLIKFFFSKKSIPGAPAFIDCLMETSKRCESHPQVFDLVLNGYTRHGSVP 200
Query: 659 DAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMM 838
++ E + R++ + P I N+ L LVR + + +A +LY+ M++RG D L M+
Sbjct: 201 ESVEAYKRLVSNGVFPSIECINLHLRKLVRLDFVDEAWNLYREMVDRGADLDSEILVTMV 260
Query: 839 HACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
HAC K GKPEEAE +FR+MK +G + D V Y +VI A+CKKP+S+ A
Sbjct: 261 HACSKGGKPEEAEDFFREMKAKGCKLDAVIYTSVIQALCKKPNSRKA 307
Score = 65.5 bits (158), Expect = 3e-08
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 578 ETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANM 757
E R N + ++ V++ + GR+ +A + +M+ I P + N LL+ L R
Sbjct: 448 EVVDRREANVVTYATVIHWLCKEGRVREACGLWGKMVSSGIKPDVVSVNSLLHGLCRVGN 507
Query: 758 IGKARDLYKGML-ERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYN 934
I AR LY+ M E G+ D T + ++ C+++ + A K DM++RG D V YN
Sbjct: 508 IDLARSLYEQMTQEEGIIPDDITYNTLIIGCIEKDSFDLAMKLLDDMRSRGLRVDIVPYN 567
Query: 935 TVILAVCKK 961
+I +CK+
Sbjct: 568 RLIYRLCKR 576
>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550337148|gb|EEE93132.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 841
Score = 204 bits (519), Expect = 4e-50
Identities = 112/254 (44%), Positives = 160/254 (62%), Gaps = 3/254 (1%)
Frame = +2
Query: 227 EEPNLEIGVSDKPTSEGARNAFTQFQQEISSQDTNTVLNQDRVIEFLLNNQHDPVLVLKY 406
E PN+ I S+ P S+ + T F + + ++ L Q + I+ LLN+Q+DP L Y
Sbjct: 28 ELPNIPI--SETPLSQNP-HPNTNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSY 84
Query: 407 FKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCLSGDSSPCATILVDRLTET 583
F WA ++RG ++ VDALC+ LHIL S AR LLN+ S D P +++V RL E+
Sbjct: 85 FTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVSRLIES 144
Query: 584 SKRCGL--NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANM 757
S+R + +F+Y+LNSYV+ RI DA +CF+ +I+ DIVP ++ NI L+ LV+ NM
Sbjct: 145 SRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNM 204
Query: 758 IGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNT 937
I +ARD+Y M +GV DC T+ +M+ A ++EGK EEAE +FR+ K +G E D Y+
Sbjct: 205 IREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSI 264
Query: 938 VILAVCKKPDSKTA 979
VI AVCKKPDS A
Sbjct: 265 VIEAVCKKPDSVAA 278
Score = 62.8 bits (151), Expect = 2e-07
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Frame = +2
Query: 512 LLNQCLSGDSSPCATILVDRLTETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRM 685
+L C GD + V+ L + GL P L +Y +++ Y + G E A +DRM
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEK-----GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529
Query: 686 IKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKP 865
+I P NI++N L +A +++D K +++ G C T + ++ +KEG
Sbjct: 530 RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589
Query: 866 EEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
A + +M G + TY +I CK
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLINGFCK 620
>ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, partial [Prunus persica]
gi|462402506|gb|EMJ08063.1| hypothetical protein
PRUPE_ppa1027201mg, partial [Prunus persica]
Length = 782
Score = 201 bits (510), Expect = 5e-49
Identities = 107/217 (49%), Positives = 142/217 (65%), Gaps = 3/217 (1%)
Frame = +2
Query: 338 LNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVW-DARKL 514
L Q +VI LL+++ +P LK+F WAEK+RGF++GVDA C+ LHIL A+ L
Sbjct: 3 LTQTKVISTLLSHRSEPNSALKHFIWAEKERGFLKGVDAFCVLLHILTGFEETHVRAQIL 62
Query: 515 LNQCLSGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMI 688
LNQ SGDS P + DRL + +KR L +FSY+LNSYVRA RI+ A +CFDRMI
Sbjct: 63 LNQYASGDSGPSQQVFFDRLVDCAKRFDFELESRVFSYLLNSYVRANRIKYAIDCFDRMI 122
Query: 689 KYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPE 868
+ ++ P ++ NILL LVR MI AR+LY M+ RG+ D TL +MMHACLKEG+P
Sbjct: 123 ELELYPCVTCMNILLVELVRRKMIVNARELYDKMVLRGMGGDRATLRVMMHACLKEGQPN 182
Query: 869 EAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
+AE+YFR + RG E D ++ I AVC KP+ + A
Sbjct: 183 KAEEYFRQARARGIELDAASHGVAIQAVCSKPNLRLA 219
Score = 61.6 bits (148), Expect = 5e-07
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +2
Query: 596 GLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKA 769
GL P +F+Y ++ Y R G I+ A + F+ M+ I P NI+++ L +A +A
Sbjct: 439 GLKPNVFTYSILIKGYFRKGDIKRALDVFNDMVAAKITPTEFTVNIVIDGLCKAGCTSEA 498
Query: 770 RDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILA 949
D ++ERG C + + ++ +KEG A +R+M+ G + VTY + +
Sbjct: 499 SDRLNKIVERGFVPGCMSYNNIIDGFIKEGAMNSALAVYREMREGGVSPNVVTYTSFVNG 558
Query: 950 VCK 958
CK
Sbjct: 559 FCK 561
Score = 60.8 bits (146), Expect = 8e-07
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 22/246 (8%)
Frame = +2
Query: 272 EGARNAFTQFQQEI--SSQDTNTVLNQDRVIEFLLNNQHDPVLVLKYFKWAE-KQRGFVR 442
EGA N+ +E+ N V V F +NQ D L + W + K++G
Sbjct: 527 EGAMNSALAVYREMREGGVSPNVVTYTSFVNGFCKSNQIDLALQM----WNDMKKKGIKL 582
Query: 443 GVDALCITLHILVNSRNVWDARKLLNQCLSGDSSPCATI-------------------LV 565
V A C + R++ ARKL ++ L SP + L
Sbjct: 583 DVTAYCALIDGFCKRRDMGTARKLFSEFLEVGLSPSTAVYSSMIWGFQNLNNMEAALDLH 642
Query: 566 DRLTETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALV 745
++ C L ++ +++ ++ G ++ A + + M++ IVP I +L+N L
Sbjct: 643 KKMISEGIPCDLKA--YTTLIDGLLKRGELQVATDLYSEMLQKKIVPDIKTYTVLINGLC 700
Query: 746 RANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPV 925
+ AR + + M +R ++ ++ KEG +EA + +M RG D +
Sbjct: 701 NKGQLENARKILEDMNKRSMTPSVHIYSTLIAGNFKEGNLQEAFRLHDEMLDRGLVPDDI 760
Query: 926 TYNTVI 943
TY+ ++
Sbjct: 761 TYDILV 766
>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cicer arietinum]
Length = 850
Score = 194 bits (494), Expect = 3e-47
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 3/220 (1%)
Frame = +2
Query: 329 NTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWDA- 505
+T +Q+++++ LL ++ +P LK+FK E++RGFV+ VD + L IL ++ +
Sbjct: 71 STSNSQNQILDTLLTHKSNPKSALKFFKGVERKRGFVKTVDVFSLLLQILSSTPQTHSSL 130
Query: 506 RKLLNQCLSGDSSPCATILVDRLTETSKRCGL--NPLLFSYVLNSYVRAGRIEDAAECFD 679
R LLN + GDSSP +LV+ L E S R G + +F+Y+LNSYVRA +I DA ECF
Sbjct: 131 RNLLNNYVFGDSSPSPKVLVEHLLECSGRYGFESDSRVFNYLLNSYVRANKIVDAVECFR 190
Query: 680 RMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEG 859
++++D++P + NILL A+VR NMI AR LY M+ERG+ DCFTL ++M ACLKEG
Sbjct: 191 TLLEHDVIPWVPIMNILLTAMVRRNMICNARQLYDEMVERGMYGDCFTLHVVMRACLKEG 250
Query: 860 KPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
K EEAEK+F++ K RG + D +Y+ V+ AVCK+ D A
Sbjct: 251 KFEEAEKFFKEAKGRGLKLDAASYSIVVQAVCKRMDLNLA 290
Score = 58.9 bits (141), Expect = 3e-06
Identities = 35/122 (28%), Positives = 58/122 (47%)
Frame = +2
Query: 614 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 793
F+ V+N + GR+ +A + IK +P N ++N V+ I A Y+ M
Sbjct: 553 FNTVINGLGKTGRVFEAQDKLKDFIKQGFIPTSITYNSIINGFVKEGAIDSALFAYQEMR 612
Query: 794 ERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSK 973
ERG+ + T +++ K K + A + DMK + E D TY+ +I CK D +
Sbjct: 613 ERGIFPNVITYTSLINGFCKCNKIDLALEMHNDMKNKRMELDVTTYSALIDGFCKMQDME 672
Query: 974 TA 979
+A
Sbjct: 673 SA 674
>ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508784178|gb|EOY31434.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 1159
Score = 194 bits (493), Expect = 5e-47
Identities = 116/276 (42%), Positives = 164/276 (59%), Gaps = 10/276 (3%)
Frame = +2
Query: 182 ETTFPVKPSSKIAFLEE-------PNLEIGVSDKPTSEGARNAFTQFQQEISSQDTNTVL 340
+T P P+ FLE+ P+ I SD P S +QDT+ L
Sbjct: 324 QTPLPGNPNPNTNFLEKVTSDSHCPSKSISDSDSPGSLIPPTPKDPRLTPSLTQDTS--L 381
Query: 341 NQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNV-WDARKLL 517
+ VI LL ++++P LKYF++ E +RGFVR +D C+ LHILV S+ + LL
Sbjct: 382 TRTHVINTLLIHRNNPESALKYFRFVENKRGFVRSIDVFCVLLHILVGSQQTNKQVKYLL 441
Query: 518 NQCLSGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 691
N+ ++GDS P + +D L + +KR L+ +F+Y+LNSYVR RI+DA +CF+ MI+
Sbjct: 442 NRFVAGDSGPTPIVFLDHLIDIAKRFDFELDSRVFNYLLNSYVRV-RIDDAVDCFNGMIE 500
Query: 692 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEE 871
+DIVP + + NILL ALVR N+I KAR+LY M+ GV D T+ +MM A LK+GKP E
Sbjct: 501 HDIVPMLPFMNILLTALVRGNLIDKARELYDKMVSIGVRGDRVTVLLMMRAFLKDGKPWE 560
Query: 872 AEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
AE++F++ K RG E D Y+ I A C+KPD A
Sbjct: 561 AEEFFKEAKARGTELDAAVYSIAIQASCQKPDLNMA 596
Score = 72.4 bits (176), Expect = 3e-10
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Frame = +2
Query: 512 LLNQCLSGDSSPCATILVDRLTETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRM 685
+L C +G+ T+ + L G+ P + +Y +++ + + G E A + FD M
Sbjct: 793 ILAHCRAGNMDMAHTVFSEMLER-----GIKPTVITYTILMDGHFKKGNAEQALDVFDEM 847
Query: 686 IKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKP 865
+ +I P NI++N L + +ARD+ K +++G C T + +++ +KEG
Sbjct: 848 VGVNITPSDFTFNIIINGLAKVGRTSEARDMLKKFVDKGFVPICLTYNSIINGFVKEGAM 907
Query: 866 EEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
A +R+M G + VTY T+I CK
Sbjct: 908 NSALAVYREMCESGLSPNVVTYTTLINGFCK 938
Score = 60.8 bits (146), Expect = 8e-07
Identities = 34/132 (25%), Positives = 63/132 (47%)
Frame = +2
Query: 584 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 763
SK L+ FS +++ + + ++ A E F + + + P + N ++ N +
Sbjct: 954 SKGLRLDVPAFSALIDGFCKEQDMDRACELFSELQQVGLSPNVIVYNSMIRGFRNVNNME 1013
Query: 764 KARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVI 943
A DL+K M+ G+ CD T ++ L+EGK A + +M +G E D +TY ++
Sbjct: 1014 AALDLHKKMINEGILCDLQTYTTLIDGLLREGKLLFAFDLYSEMLAKGIEPDIITYTVLL 1073
Query: 944 LAVCKKPDSKTA 979
+C K + A
Sbjct: 1074 NGLCNKGQLENA 1085
>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 927
Score = 192 bits (489), Expect = 1e-46
Identities = 110/275 (40%), Positives = 165/275 (60%), Gaps = 8/275 (2%)
Frame = +2
Query: 179 SETTFPVKPSSKIAFLEEPNLEIGVSDKPTSEGARNAFTQFQQEI-----SSQDTNTVLN 343
S+ FP +P S + PN + S + N +++ +SQD+ VL
Sbjct: 26 SQPQFPNEPQSSLYQNSYPNFSYAEKNSQDSNFSENLIFLKSRQVELTKPASQDS--VLA 83
Query: 344 QDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILV-NSRNVWDARKLLN 520
+ VI+ LL+ + DP L YFK E RGFVR +D+LC+ LHIL +S + A+ LLN
Sbjct: 84 RTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLN 143
Query: 521 QCLSGDSSPCATILVDRLTETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRMIKY 694
+ +SGDS P ILVD ++KR + +++Y+LNSY++A ++ DA CF+R+++
Sbjct: 144 RFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVES 203
Query: 695 DIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEA 874
DIVP I + N LL ALV+ +MI +AR++Y+ M+ +GV DCFT+ IMM A LK+ EEA
Sbjct: 204 DIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEA 263
Query: 875 EKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
+K+F + K+RG + D Y+ VI A CK D + A
Sbjct: 264 KKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELA 298
Score = 79.0 bits (193), Expect = 3e-12
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Frame = +2
Query: 512 LLNQCLSGDSSPCATILVDRLTETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRM 685
+L C G+ A++ D L CGL P + +S +++ Y + G E A FDRM
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLD-----CGLKPNVITYSILMDGYFKNGDTEYAFYVFDRM 549
Query: 686 IKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKP 865
+ +IVP NI +N L + +A+D+ K +E+G C T + +M +KEG
Sbjct: 550 VDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSV 609
Query: 866 EEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
A +R+M G + +TY T+I CK ++ A
Sbjct: 610 SSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647
>gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus guttatus]
Length = 836
Score = 189 bits (481), Expect = 1e-45
Identities = 104/231 (45%), Positives = 145/231 (62%), Gaps = 4/231 (1%)
Frame = +2
Query: 299 FQQEISSQDTNTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGV-DALCITLHI 475
FQ+ IS N L+Q V+E LL+N +DP L YF+WAEKQRGFVR + D+ + LHI
Sbjct: 59 FQKPISE---NPRLSQANVVETLLSNFNDPRSALDYFRWAEKQRGFVREIGDSFLVLLHI 115
Query: 476 LVNSR-NVWDARKLLNQCLSGDSSPCATILVDRLTETSKRCGL--NPLLFSYVLNSYVRA 646
LV+S + AR LLN LS DS+P +LV RL + S + G +P +F Y LN YVRA
Sbjct: 116 LVSSHYHHGSARNLLNNYLSSDSAPSGGVLVQRLIDCSDKFGFRRSPRIFDYALNGYVRA 175
Query: 647 GRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTL 826
R +DA +CF ++ ++P + N L++L+R +MI +AR L+ G++ + +S DC T+
Sbjct: 176 QRYKDAEDCFYALVSRGVIPCVRILNNFLHSLIRTSMIDEARGLFGGIVSKKLSYDCATV 235
Query: 827 DIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
++MM A L+EGK EEAEK+F + K G DP YNT + C KPD A
Sbjct: 236 NMMMCASLREGKTEEAEKFFLEAKRSGIILDPFVYNTAVRTACMKPDLNVA 286
Score = 62.4 bits (150), Expect = 3e-07
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 602 NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGI-SYRNILLNALVRANMIGKARDL 778
N ++ +++ + GR+ DA +D+MI + I P + SY N++L R + A L
Sbjct: 440 NVFTYNNLISWFCEGGRLGDAIRVWDKMIDHGIEPSVVSYNNMILGNC-RKGFMDVAAAL 498
Query: 779 YKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
M E+ V + T I++ K+G+ E+A F M T G VTYNTVI +C+
Sbjct: 499 LSEMAEKNVKPNVITYSILVDGYFKKGETEKAIALFDSMLTSGISPTDVTYNTVINGLCR 558
Score = 62.0 bits (149), Expect = 4e-07
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Frame = +2
Query: 512 LLNQCLSGDSSPCATILVDRLTETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 691
+L C G A +L + + K N + +S +++ Y + G E A FD M+
Sbjct: 483 ILGNCRKGFMDVAAALLSEMAEKNVKP---NVITYSILVDGYFKKGETEKAIALFDSMLT 539
Query: 692 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEE 871
I P N ++N L R A+D + + +G + C T + +++ +KEG+
Sbjct: 540 SGISPTDVTYNTVINGLCRVGQTVAAKDRMEEFVAKGFAPICMTYNSLINGFMKEGEVNS 599
Query: 872 ----------------------AEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
A K R+M+ +G E D YN +I A CK+ D +A
Sbjct: 600 ALAVYNEMCGTGILPNRKNLDLALKMQREMRAKGIEMDVTCYNALIDAFCKRNDMNSA 657
>ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citrus clementina]
gi|568859583|ref|XP_006483317.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Citrus sinensis]
gi|557553718|gb|ESR63732.1| hypothetical protein
CICLE_v10010816mg [Citrus clementina]
Length = 850
Score = 189 bits (481), Expect = 1e-45
Identities = 124/331 (37%), Positives = 174/331 (52%), Gaps = 5/331 (1%)
Frame = +2
Query: 2 RIYVASSSHSPWLLRSYR--KSFCSASTLNSQDPVLKEKPISESGISETSDSKTGFFDKP 175
R + SS P+++R ++ KS CS P EKPIS + P
Sbjct: 2 RSSLTSSPIRPFIIRPFKNTKSICS-------QPQSSEKPISS--------------ESP 40
Query: 176 ISETTFPVKPSSKIAFLEEPNLEIGVSDKPTSEGARNAFTQFQQEISSQDTNTVLNQDRV 355
+SE FP K + F P + +PT L+Q V
Sbjct: 41 VSEN-FPEKITKGSHFSGNPIFPESNTFQPTD----------------------LSQTSV 77
Query: 356 IEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCLS 532
I LL+ +++PV +YFK E++RGF++ +D C+ LHIL+ R AR LLN +S
Sbjct: 78 ISSLLSCRNEPVSAFEYFKRVERRRGFLKSLDTFCVLLHILMKDRESHRYARNLLNHYVS 137
Query: 533 GDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVP 706
G S P + ++D L ET+KR L+ +FSY+L SYVRA RI DA +C + MI+ DI+P
Sbjct: 138 GGSEPTSAAIIDHLIETAKRFDFDLDSGVFSYLLRSYVRADRINDAVDCCNGMIERDIIP 197
Query: 707 GISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYF 886
+ N +L ALVR N+I +A++ Y M +G+ D T+ +MM ACLKE EEAEKYF
Sbjct: 198 LLRSMNSVLKALVRRNLIDEAKEFYNKMNLKGLGVDSVTIRVMMRACLKEDTTEEAEKYF 257
Query: 887 RDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
RD K G + D Y VI A+C+KP+ K A
Sbjct: 258 RDAKALGVKLDARAYRMVIQALCRKPNLKVA 288
Score = 59.3 bits (142), Expect = 2e-06
Identities = 37/125 (29%), Positives = 59/125 (47%)
Frame = +2
Query: 587 KRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGK 766
KR N + +S +++ Y + G E A + D+M I P NI++N L +A
Sbjct: 506 KRVTPNVVTYSVLIDGYFKQGDAERAFDVLDQMENAKISPTDYTSNIIINGLCKAGRTSV 565
Query: 767 ARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVIL 946
A D K M+E+G C T + ++ +KE A +R+M G + VTY +I
Sbjct: 566 AWDKLKKMVEKGFIPKCLTYNSIIDGFVKEDDMISALTVYREMHESGLSPNVVTYTILIN 625
Query: 947 AVCKK 961
C+K
Sbjct: 626 GFCRK 630
>ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
gi|561010070|gb|ESW08977.1| hypothetical protein
PHAVU_009G090400g [Phaseolus vulgaris]
Length = 741
Score = 183 bits (464), Expect = 1e-43
Identities = 98/228 (42%), Positives = 143/228 (62%), Gaps = 4/228 (1%)
Frame = +2
Query: 308 EISSQDTNTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNS 487
E S ++ + +Q+ V++ LL + DP+ L +FK E++RGFV+ VD LC+ L IL +S
Sbjct: 50 EAQSPESPLIPSQNEVLDTLLLRKADPISALMFFKQVERKRGFVKTVDILCLLLQILASS 109
Query: 488 RNVW-DARKLLNQCLSGDSSPCATILVDRLTETSKRCGL---NPLLFSYVLNSYVRAGRI 655
+ DA+ LLN + GDS+PCA +LV+ L E ++R G + +F+Y+LNSYVRA +I
Sbjct: 110 PDTHGDAKYLLNNYVFGDSAPCAKVLVELLVECAERYGFELSDSRVFNYLLNSYVRANKI 169
Query: 656 EDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIM 835
DA ECF M+++ ++P + NILL A+VR NM +Y M+ER + DC+TL I+
Sbjct: 170 TDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMVERELYGDCYTLHIL 229
Query: 836 MHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
M ACLK G+ EA YF + RG + D Y+ VI AVC+ PD A
Sbjct: 230 MRACLKGGRFAEAWNYFEEAVGRGLKLDAAAYSIVIQAVCRVPDLNLA 277
Score = 67.0 bits (162), Expect = 1e-08
Identities = 34/122 (27%), Positives = 60/122 (49%)
Frame = +2
Query: 614 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 793
F+ ++N + GR+ +A + + IK VP N +++ V+ I A Y+ M
Sbjct: 540 FNTIMNGLCKVGRVSEAKDKLNTFIKQGFVPTSMTYNCIIDGFVKEGAIDSAESTYREMC 599
Query: 794 ERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSK 973
+ G+S + T +++ K K + A K + DMK++G E D Y+ +I CK D +
Sbjct: 600 DSGISPNVITCTTLINGFFKTNKIDLALKMYDDMKSKGLELDITAYSALIDGFCKMRDME 659
Query: 974 TA 979
A
Sbjct: 660 NA 661
>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 834
Score = 177 bits (449), Expect = 6e-42
Identities = 93/226 (41%), Positives = 143/226 (63%), Gaps = 3/226 (1%)
Frame = +2
Query: 311 ISSQDTNTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILV-NS 487
I S ++ ++R + LL+++ +P LK+F E++RGFV+ VD + + +HIL NS
Sbjct: 49 IISPESQPSEKKNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNS 108
Query: 488 RNVWDARKLLNQCLSGDSSPCATILVDRLTETSKRCGL--NPLLFSYVLNSYVRAGRIED 661
+ + LLN + GD++P A + V+ L E S R G + +F+Y+L S+VR +I D
Sbjct: 109 KTCSSLQFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITD 168
Query: 662 AAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMH 841
A ECF M+++D+VP + N LL A+VR NM+ AR LY M+ERG+ DC+TL ++M
Sbjct: 169 AVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMR 228
Query: 842 ACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
AC+KEGK EE EK+F++ K RG E D Y+ ++ AVC++ D A
Sbjct: 229 ACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLA 274
>ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Solanum lycopersicum]
Length = 850
Score = 152 bits (383), Expect = 3e-34
Identities = 83/216 (38%), Positives = 130/216 (60%), Gaps = 4/216 (1%)
Frame = +2
Query: 344 QDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGV-DALCITLHILVNSR-NVWDARKLL 517
++ V++ LL+++ DP +YF+ A QRGF+ D + LHILVNS + +R+LL
Sbjct: 70 KNHVVDVLLSHRDDPDSAYRYFQTARLQRGFLHSKSDPFFVLLHILVNSAMHQHKSRRLL 129
Query: 518 NQCLSGDSSPCATILVDRLTETSKRC--GLNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 691
+ S DS P AT++ + L + K GLNP +F+++++S ++A R+ DA +CF+ M++
Sbjct: 130 DYYASSDSGPSATVVFNGLVKCGKTFDFGLNPKIFNFLVSSCMKANRLNDAIDCFNAMLE 189
Query: 692 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEE 871
+DI+ I N LL LVR M+G A DLY ++ RG DC T+ I+M ACL+EGK +E
Sbjct: 190 HDIMLWIPIMNSLLKKLVRQGMVGVAEDLYTDIVSRGTHYDCGTVHILMEACLREGKMKE 249
Query: 872 AEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
A K + K G +FD Y+ + CK+ + A
Sbjct: 250 AVKLLEETKMSGIKFDAGLYSCGVYVACKEQNLSLA 285
Score = 59.7 bits (143), Expect = 2e-06
Identities = 31/132 (23%), Positives = 65/132 (49%)
Frame = +2
Query: 584 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 763
+K L+ + ++ +++ + + ++ A+E FD +++ I P + N +++ + N +
Sbjct: 644 NKEIKLDVIAYAVLIDGFCKRRDMKSASELFDEILQVGISPNLFVYNSMMSGFINVNNME 703
Query: 764 KARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVI 943
A L M+ GV CD T ++ LK+GK + A F +M +G D +TY ++
Sbjct: 704 AALVLRDKMINEGVPCDLKTYTTLIDGLLKDGKIDLASHLFTEMLGKGIMPDDITYTVLV 763
Query: 944 LAVCKKPDSKTA 979
+ K + A
Sbjct: 764 HGLSNKGQVENA 775
Score = 58.2 bits (139), Expect = 5e-06
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 602 NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLY 781
N + +S +++ Y R G + A FD+M+ I P N +++ + + +A+DL
Sbjct: 509 NVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPTDYTFNTVISGMSKVGKTSEAKDLL 568
Query: 782 KGMLERG-VSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
K ++E G + C + + ++ LKE A +R+M G D VTY T+I +CK
Sbjct: 569 KRIVEGGDLLPTCMSYNSLIDGFLKEDDVSSALSVYREMCNSGISPDVVTYTTLIDGLCK 628
>ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis
thaliana] gi|330254554|gb|AEC09648.1| pentatricopeptide
repeat protein LOJ [Arabidopsis thaliana]
Length = 867
Score = 152 bits (383), Expect = 3e-34
Identities = 92/268 (34%), Positives = 148/268 (55%), Gaps = 10/268 (3%)
Frame = +2
Query: 194 PVKPSSKIAFLEEP-NLEIGVSDKPTSEGA------RNAFTQFQQEISSQDTNTVLNQDR 352
P SS+ FL P N +SD T + + + S+ +T ++ R
Sbjct: 22 PKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTSVPNHSPLTSTSETENHVDDAR 81
Query: 353 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCL 529
VIE LL ++DPV L+Y W + G D + +HIL++S + D A LL +
Sbjct: 82 VIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFV 141
Query: 530 SGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIV 703
S + + ++V+ L ++SKR G L P F+Y+LN+Y+R R++ A +CF M+ +V
Sbjct: 142 SNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVV 201
Query: 704 PGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKY 883
P + Y N +L++LVR+N+I +A+++Y M+ GV+ D T ++M A L+E KPEEA K
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKI 261
Query: 884 FRDMKTRGFEFDPVTYNTVILAVCKKPD 967
FR + +RG E D + ++ + A CK PD
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKTPD 289
>ref|XP_004301621.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39230,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 374
Score = 148 bits (373), Expect = 4e-33
Identities = 87/223 (39%), Positives = 123/223 (55%), Gaps = 4/223 (1%)
Frame = +2
Query: 311 ISSQDTNTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSR 490
+SSQ Q +++ LL+++ DP L FK + + + + LHIL+
Sbjct: 22 LSSQPNPLPPTQTQLLTSLLSHKSDPSSALHLFKTNPSS---LHSLHTVAVMLHILMPFP 78
Query: 491 NVWD-ARKLLNQCLSGDSSPCATILVDRLTETSKRCGLNPL---LFSYVLNSYVRAGRIE 658
A+ LL +SG S P +LVD L + +KR + + +FSY+LNSYVRA RI
Sbjct: 79 ETHARAKTLLYSYVSGGSGPAPALLVDSLLDCAKRFEFDSVSSPVFSYLLNSYVRADRIR 138
Query: 659 DAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMM 838
DA C +RM++ + + NI+L AL R NM +A++LY GM+ RGV DC TL +MM
Sbjct: 139 DAVNCLERMVEIGVCGSVECMNIVLKALFRRNMFKEAKELYGGMVGRGVGGDCATLHVMM 198
Query: 839 HACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPD 967
C KEGKP EAE+YFR+ + RG D Y+ I A C D
Sbjct: 199 RVCFKEGKPGEAEEYFRNARGRGIAADGELYDVAIGAACMSGD 241
>ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565397380|ref|XP_006364274.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 854
Score = 146 bits (369), Expect = 1e-32
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Frame = +2
Query: 353 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGV-DALCITLHILVNSR-NVWDARKLLNQC 526
V++ LL+++ DP ++F+ A QRGF+ D + LHILVNS + AR+LL+
Sbjct: 77 VVDVLLSHRDDPDSAYRHFQTARLQRGFLHSKSDPFFVLLHILVNSAMHQHKARRLLDYY 136
Query: 527 LSGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDI 700
S DS P ATI+ + L + K LNP +F+++++S V+A R+ DA +CF+ M+++DI
Sbjct: 137 ASSDSGPSATIIFNGLVKCGKTFDFELNPKIFNFLISSCVKANRLNDAIDCFNGMLEHDI 196
Query: 701 VPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEK 880
+ I N LL LVR +M+G A DLY ++ RG DC T+ I+M ACL+EG+ +EA K
Sbjct: 197 MLWIPIMNRLLKELVRQDMVGVAGDLYTDIVSRGTHYDCRTVHILMAACLREGRIKEAVK 256
Query: 881 YFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
+ K G +FD Y+ + CK+ + A
Sbjct: 257 LLEEAKMSGIKFDAGLYSCWVYVACKEQNLSLA 289
Score = 62.0 bits (149), Expect = 4e-07
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Frame = +2
Query: 512 LLNQCLSGDSSPCATILVDRLTETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 691
+L C +G+ A L +L E + N + +S +++ Y R G + A FD+M+
Sbjct: 486 ILGNCRNGNMDK-ALDLFSQLPERHLKA--NVVTYSILIDGYFRKGDADKAENMFDQMVS 542
Query: 692 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERG-VSCDCFTLDIMMHACLKEGKPE 868
I P N +++ + + +A+DL K ++E G + C + + ++ LKEG
Sbjct: 543 SGISPTDYTFNTVISGMSKVGKTSEAKDLLKKIVEGGDLIPTCMSYNSLIDGFLKEGDVS 602
Query: 869 EAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
A +R+M G D VTY T+I +CK
Sbjct: 603 SALAVYREMCNSGISPDVVTYTTLIDGLCK 632
Score = 57.4 bits (137), Expect = 9e-06
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +2
Query: 602 NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGI-SYRNILLNALVRANMIGKARDL 778
N +++ ++ + G+++ A +D+M+ I+P I SY NI+L NM KA DL
Sbjct: 443 NVFVYNSIIAWSCKKGQMDKAQNTWDKMVANGILPTITSYNNIILGNCRNGNM-DKALDL 501
Query: 779 YKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCK 958
+ + ER + + T I++ ++G ++AE F M + G T+NTVI + K
Sbjct: 502 FSQLPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPTDYTFNTVISGMSK 561
Score = 57.4 bits (137), Expect = 9e-06
Identities = 31/132 (23%), Positives = 64/132 (48%)
Frame = +2
Query: 584 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 763
+K L+ + ++ +++ + + ++ A+E FD +++ I P + N +++ N +
Sbjct: 648 NKEIKLDVIAYAVLIDGFCKRRDMKSASELFDEILQVGISPNLFVYNSMMSGFRNVNNME 707
Query: 764 KARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVI 943
A L M+ GV CD T ++ LK+GK + A F +M +G D +TY ++
Sbjct: 708 AALVLRDKMINEGVPCDLETYTTLIDGLLKDGKIDLASDLFTEMLGKGIMPDDITYTVLV 767
Query: 944 LAVCKKPDSKTA 979
+ K + A
Sbjct: 768 HGLSNKGQVENA 779
>ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325627|gb|EFH56047.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 867
Score = 146 bits (369), Expect = 1e-32
Identities = 91/268 (33%), Positives = 148/268 (55%), Gaps = 10/268 (3%)
Frame = +2
Query: 194 PVKPSSKIAFLEEP-NLEIGVSDKPTSEGARNAFTQ------FQQEISSQDTNTVLNQDR 352
P SS+ FL P N +SD T + F IS+ +T+ ++
Sbjct: 22 PKPISSQYRFLHPPDNQSRDISDSTTEVFSELEFPHKASGPNHSPLISTSETDNHVDDAH 81
Query: 353 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCL 529
VIE LL ++DPV L+Y W + R G D + +HIL +S + D A LL +
Sbjct: 82 VIEVLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFV 141
Query: 530 SGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIV 703
S + + + +V+ L ++SKR L+ F+Y+LN+Y+R R++ A +CF+ M+ ++V
Sbjct: 142 SSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVV 201
Query: 704 PGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKY 883
P + Y N +L++LVR+N+I +A+++Y M+ GV+ D T ++M A L+E KPEEA K
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKI 261
Query: 884 FRDMKTRGFEFDPVTYNTVILAVCKKPD 967
FR + +RG E D + ++ + A CK D
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKMKD 289
>ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Capsella rubella]
gi|482562372|gb|EOA26562.1| hypothetical protein
CARUB_v10022620mg [Capsella rubella]
Length = 861
Score = 139 bits (351), Expect = 1e-30
Identities = 76/209 (36%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Frame = +2
Query: 350 RVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQC 526
RVIE LL ++DPV L+Y W + G D + +HIL +S + D A LL
Sbjct: 87 RVIEVLLGRRNDPVSALQYCNWVKPLPHLYEGGDVFWVLVHILFSSPHTHDRASNLLVMF 146
Query: 527 LSGDSSPCATILVDRLTETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDI 700
+S + + +++V+ L E+++R G L+ F+Y+LN+Y+R R++ A +CF+ M++ ++
Sbjct: 147 VSSNPTLIPSVIVNYLVESAERYGFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVERNV 206
Query: 701 VPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEK 880
+P + Y N +L++LVR+N+I +A+++Y M+ GV+ D T ++M A L+E EEA K
Sbjct: 207 IPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERNSEEAVK 266
Query: 881 YFRDMKTRGFEFDPVTYNTVILAVCKKPD 967
FR + +RG E D + Y+ + A CK PD
Sbjct: 267 IFRRVMSRGAEPDGLLYSLAVQAACKMPD 295
Score = 57.8 bits (138), Expect = 7e-06
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Frame = +2
Query: 545 PCATILVDRLTETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISY 718
P + +D L E + G+ +Y V+ + V+ G++E+A D M+ + I +
Sbjct: 294 PDLVLAMDLLREMRGKLGVPASQETYTSVIVACVKQGKMEEAVRVKDEMVGFGIPMSLIA 353
Query: 719 RNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMK 898
L+N + N +GKA D + M E G++ D +M+ K G+ E + ++ MK
Sbjct: 354 ATSLINGYCKGNKLGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNGEMENTVEIYKRMK 413
Query: 899 TRGFEFDPVTYNTVILAVCKKPDSKTA 979
+ G V +T+I A K + A
Sbjct: 414 SVGISPSSVLVHTMIQAFLKAESPEAA 440
Score = 57.4 bits (137), Expect = 9e-06
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Frame = +2
Query: 503 ARKLLNQCLSGDSSPCATILVDRLTETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECF 676
A L+N G+ A +R+ E GL P ++FS ++ + + G +E+ E +
Sbjct: 354 ATSLINGYCKGNKLGKALDFFNRMEEE----GLAPDKVMFSVMIEWFCKNGEMENTVEIY 409
Query: 677 DRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVSCDCFTLDIMMHACLKE 856
RM I P + ++ A ++A A D++ E + I + C K+
Sbjct: 410 KRMKSVGISPSSVLVHTMIQAFLKAESPEAALDIFNDSFETWTAHGFMCNKIFLLLC-KQ 468
Query: 857 GKPEEAEKYFRDMKTRGFEFDPVTYNTVILAVCKKPDSKTA 979
GK + A + R M+ +G E + V YN +ILA C+K + A
Sbjct: 469 GKVDAATSFLRMMENKGIEPNVVFYNNLILAHCRKKNMDLA 509
Score = 57.4 bits (137), Expect = 9e-06
Identities = 32/126 (25%), Positives = 59/126 (46%)
Frame = +2
Query: 584 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 763
SK L+ + +++ + + ++ A F +++ + P +S N L++ +
Sbjct: 659 SKDLKLDIPAYGALIDGFCKKHDMKTAYTLFSELLEQGLRPNVSVYNSLISGFRNLGKMD 718
Query: 764 KARDLYKGMLERGVSCDCFTLDIMMHACLKEGKPEEAEKYFRDMKTRGFEFDPVTYNTVI 943
A DLYK M+ G+SCD FT M+ LKEG A + ++ G D + Y ++
Sbjct: 719 AATDLYKKMVNDGISCDLFTFTTMIDGLLKEGNLIVASDLYSELLALGIVPDEILYMVLV 778
Query: 944 LAVCKK 961
+ KK
Sbjct: 779 NGLSKK 784