BLASTX nr result

ID: Akebia24_contig00029360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00029360
         (632 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    60   7e-07
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    60   7e-07
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    57   6e-06

>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/69 (37%), Positives = 38/69 (55%)
 Frame = -2

Query: 292 LPRWVHNLFLRLKTHACSDRERIMWMFVPFAVCWCLWKEKNGRVF*GREHSIQDVFLGII 113
           +PR V       +      ++R  W  +P ++ W +WKE+N R F G E+S+QDV L  I
Sbjct: 366 MPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIENSVQDVKLNCI 425

Query: 112 GLIFFWCKQ 86
            L+ FWC Q
Sbjct: 426 LLLCFWCNQ 434


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/69 (37%), Positives = 38/69 (55%)
 Frame = -2

Query: 292 LPRWVHNLFLRLKTHACSDRERIMWMFVPFAVCWCLWKEKNGRVF*GREHSIQDVFLGII 113
           +PR V       +      ++R  W  +P ++ W +WKE+N R F G E+S+QDV L  I
Sbjct: 472 MPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIENSVQDVKLNCI 531

Query: 112 GLIFFWCKQ 86
            L+ FWC Q
Sbjct: 532 LLLCFWCNQ 540


>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = -2

Query: 220 WMFVPFAVCWCLWKEKNGRVF*GREHSIQDVFLGIIGLIFFWCKQFI 80
           W  VP  + W +WKE+N R F G++++IQ +    +GL +FWCKQ +
Sbjct: 157 WRIVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCLGLYYFWCKQVV 203


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