BLASTX nr result
ID: Akebia24_contig00029113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00029113
(439 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24383.3| unnamed protein product [Vitis vinifera] 91 1e-21
ref|XP_002276040.1| PREDICTED: uncharacterized protein LOC100263... 91 1e-21
tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays] gi... 102 6e-20
tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea m... 102 6e-20
ref|NP_001149939.1| RNA binding protein [Zea mays] gi|195635617|... 102 6e-20
gb|ACF84316.1| unknown [Zea mays] 102 6e-20
gb|ACF83094.1| unknown [Zea mays] gi|414876935|tpg|DAA54066.1| T... 102 6e-20
ref|XP_004249359.1| PREDICTED: nucleolin-like isoform 1 [Solanum... 102 7e-20
ref|XP_006645744.1| PREDICTED: heterogeneous nuclear ribonucleop... 101 9e-20
emb|CBI24384.3| unnamed protein product [Vitis vinifera] 101 1e-19
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258... 101 1e-19
ref|XP_002307930.1| RNA recognition motif-containing family prot... 100 2e-19
ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, ... 100 2e-19
ref|XP_004967762.1| PREDICTED: nuclear localization sequence-bin... 100 3e-19
gb|EMT04032.1| Nuclear polyadenylated RNA-binding protein 4 [Aeg... 100 3e-19
gb|EMS57325.1| Nuclear polyadenylated RNA-binding protein 4 [Tri... 100 3e-19
ref|XP_002878114.1| hypothetical protein ARALYDRAFT_486125 [Arab... 100 3e-19
ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group] g... 100 3e-19
dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sati... 100 3e-19
gb|AAM73765.1|AF403292_1 RNA-binding protein AKIP1 [Vicia faba] 100 3e-19
>emb|CBI24383.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 90.9 bits (224), Expect(2) = 1e-21
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+YV NVGP + KLR FFAKFGEIE+GP G D+ TGK RGFAI ++K+ EG AL+E
Sbjct: 307 LYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGFAIIVFKTAEGMKRALEEP 366
Query: 183 WKLFEGSLLQCTK 221
K FE LQC++
Sbjct: 367 IKTFESCKLQCSR 379
Score = 38.1 bits (87), Expect(2) = 1e-21
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 319 MQPNNLAMLTYSTGMNPGMVGQNLNPAAAFMSQSSGIGV 435
+ P+N + Y G+N G++GQN+NP + + +G+
Sbjct: 400 LPPSNYQLQAYQMGLNQGLIGQNVNPQGVLVGHNQAVGI 438
>ref|XP_002276040.1| PREDICTED: uncharacterized protein LOC100263294 [Vitis vinifera]
Length = 457
Score = 90.9 bits (224), Expect(2) = 1e-21
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+YV NVGP + KLR FFAKFGEIE+GP G D+ TGK RGFAI ++K+ EG AL+E
Sbjct: 221 LYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGFAIIVFKTAEGMKRALEEP 280
Query: 183 WKLFEGSLLQCTK 221
K FE LQC++
Sbjct: 281 IKTFESCKLQCSR 293
Score = 38.1 bits (87), Expect(2) = 1e-21
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 319 MQPNNLAMLTYSTGMNPGMVGQNLNPAAAFMSQSSGIGV 435
+ P+N + Y G+N G++GQN+NP + + +G+
Sbjct: 314 LPPSNYQLQAYQMGLNQGLIGQNVNPQGVLVGHNQAVGI 352
>tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays]
gi|414876938|tpg|DAA54069.1| TPA: RNA binding protein
isoform 2 [Zea mays]
Length = 454
Score = 102 bits (254), Expect = 6e-20
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FFA+FGEIEEGP G D+VTGK +GFA+F+YK+ E AL+E
Sbjct: 233 IFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEP 292
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 293 HKHFEGVMLHCQKAIDGPKPNK 314
>tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
Length = 372
Score = 102 bits (254), Expect = 6e-20
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FFA+FGEIEEGP G D+VTGK +GFA+F+YK+ E AL+E
Sbjct: 233 IFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEP 292
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 293 HKHFEGVMLHCQKAIDGPKPNK 314
>ref|NP_001149939.1| RNA binding protein [Zea mays] gi|195635617|gb|ACG37277.1| RNA
binding protein [Zea mays]
Length = 455
Score = 102 bits (254), Expect = 6e-20
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FFA+FGEIEEGP G D+VTGK +GFA+F+YK+ E AL+E
Sbjct: 234 IFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEP 293
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 294 HKHFEGVMLHCQKAIDGPKPNK 315
>gb|ACF84316.1| unknown [Zea mays]
Length = 410
Score = 102 bits (254), Expect = 6e-20
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FFA+FGEIEEGP G D+VTGK +GFA+F+YK+ E AL+E
Sbjct: 189 IFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEP 248
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 249 HKHFEGVMLHCQKAIDGPKPNK 270
>gb|ACF83094.1| unknown [Zea mays] gi|414876935|tpg|DAA54066.1| TPA: hypothetical
protein ZEAMMB73_489429 [Zea mays]
gi|414876936|tpg|DAA54067.1| TPA: hypothetical protein
ZEAMMB73_489429 [Zea mays]
Length = 379
Score = 102 bits (254), Expect = 6e-20
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FFA+FGEIEEGP G D+VTGK +GFA+F+YK+ E AL+E
Sbjct: 233 IFVSNVGADIDPQKLLQFFARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEP 292
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 293 HKHFEGVMLHCQKAIDGPKPNK 314
>ref|XP_004249359.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
gi|460407845|ref|XP_004249360.1| PREDICTED:
nucleolin-like isoform 2 [Solanum lycopersicum]
Length = 409
Score = 102 bits (253), Expect = 7e-20
Identities = 53/88 (60%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+YV NVG +VD KLR FFAKFGEIEEGP G D V+GK +GFAIF+YKS EG N AL+E
Sbjct: 200 IYVGNVGQDVDGEKLRAFFAKFGEIEEGPSGIDSVSGKFKGFAIFVYKSVEGANKALEEP 259
Query: 183 WKLFEGSLLQCTKALE----GGQGNKNQ 254
KLF+G L C K +E G N NQ
Sbjct: 260 QKLFDGCQLFCKKFVENLNNAGSSNANQ 287
>ref|XP_006645744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Oryza
brachyantha]
Length = 416
Score = 101 bits (252), Expect = 9e-20
Identities = 55/119 (46%), Positives = 74/119 (62%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FF+K+GEIEEGP G D+ TGK +GFA+F+YK+ EG AL+E
Sbjct: 199 IFVSNVGADIDPQKLLLFFSKYGEIEEGPLGLDKATGKPKGFALFVYKTLEGAKKALQEP 258
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQILEPMVXXXXXXXASFSSSCKYAAEQSCNAHILHG 359
K FEG +L C KA++G + NK L + A S K AA ++H L G
Sbjct: 259 HKQFEGVVLHCQKAIDGPKPNKGGGLGGL------YGAGTSGGRKGAAGYGAHSHSLPG 311
>emb|CBI24384.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 101 bits (251), Expect = 1e-19
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNV +DP KL +FFAKFGEIEEGP G D+ TGK +GFA+F+YKS E AL+E
Sbjct: 270 IFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEP 329
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K+FEG L C KA++G + NK
Sbjct: 330 HKIFEGHTLHCQKAIDGPKPNK 351
>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
uncharacterized protein LOC100258161 isoform 2 [Vitis
vinifera] gi|147853236|emb|CAN80681.1| hypothetical
protein VITISV_037734 [Vitis vinifera]
Length = 478
Score = 101 bits (251), Expect = 1e-19
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNV +DP KL +FFAKFGEIEEGP G D+ TGK +GFA+F+YKS E AL+E
Sbjct: 255 IFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEP 314
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K+FEG L C KA++G + NK
Sbjct: 315 HKIFEGHTLHCQKAIDGPKPNK 336
>ref|XP_002307930.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222853906|gb|EEE91453.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 474
Score = 100 bits (250), Expect = 2e-19
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+YVSNVG N+DP KL FF++FGEIEEGP G D+ TGK +GF +F+YK+ E AL+E
Sbjct: 239 IYVSNVGANLDPQKLMSFFSEFGEIEEGPLGLDKATGKPKGFCLFVYKTVESAKKALEEP 298
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQ 254
K FEG +L C KA++G + K+Q
Sbjct: 299 HKSFEGHILHCQKAVDGPKHAKSQ 322
>ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223538696|gb|EEF40297.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 478
Score = 100 bits (249), Expect = 2e-19
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+Y+SNVG ++DP +L FF+KFGEIEEGP G D++TGK +GF +F+YKS E AL+E
Sbjct: 240 IYISNVGADLDPQQLTSFFSKFGEIEEGPLGLDKLTGKPKGFCLFVYKSVESAKKALEEP 299
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQ 254
K FEG +L C KA++G + K+Q
Sbjct: 300 HKNFEGHILHCQKAVDGPKHGKSQ 323
>ref|XP_004967762.1| PREDICTED: nuclear localization sequence-binding protein-like
[Setaria italica]
Length = 465
Score = 100 bits (248), Expect = 3e-19
Identities = 54/119 (45%), Positives = 72/119 (60%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FFA++GEIEEGP G D+VTGK +GFA+F+YK+ E AL+E
Sbjct: 247 IFVSNVGADIDPQKLFLFFARYGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEP 306
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQILEPMVXXXXXXXASFSSSCKYAAEQSCNAHILHG 359
K FEG +L C KA++G + NK + A SS K A +H L G
Sbjct: 307 HKHFEGVVLHCQKAIDGPKSNK------IGGHGGFYGAGASSGSKGVAGYGATSHSLPG 359
>gb|EMT04032.1| Nuclear polyadenylated RNA-binding protein 4 [Aegilops tauschii]
Length = 480
Score = 100 bits (248), Expect = 3e-19
Identities = 52/119 (43%), Positives = 73/119 (61%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FF+K+GEIEEGP G D+ TGK +GFA+F+Y++ E AL+E
Sbjct: 266 IFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKATGKPKGFALFVYRTLESAKKALQEP 325
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQILEPMVXXXXXXXASFSSSCKYAAEQSCNAHILHG 359
K FEG +L C KA++G + NK A+ +S K AA ++H L G
Sbjct: 326 HKSFEGVMLHCQKAIDGPKPNKG----------GGYGATTTSGRKGAAGYGASSHSLPG 374
>gb|EMS57325.1| Nuclear polyadenylated RNA-binding protein 4 [Triticum urartu]
Length = 503
Score = 100 bits (248), Expect = 3e-19
Identities = 52/119 (43%), Positives = 73/119 (61%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FF+K+GEIEEGP G D+ TGK +GFA+F+Y++ E AL+E
Sbjct: 289 IFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKATGKPKGFALFVYRTLESAKKALQEP 348
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQILEPMVXXXXXXXASFSSSCKYAAEQSCNAHILHG 359
K FEG +L C KA++G + NK A+ +S K AA ++H L G
Sbjct: 349 HKSFEGVMLHCQKAIDGPKPNKG----------GGYGATTTSGRKGAAGYGASSHSLPG 397
>ref|XP_002878114.1| hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp.
lyrata] gi|297323952|gb|EFH54373.1| hypothetical protein
ARALYDRAFT_486125 [Arabidopsis lyrata subsp. lyrata]
Length = 477
Score = 100 bits (248), Expect = 3e-19
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+YVSNVG +DP KL FF+KFGEIEEGP G D+ TG+ +GF +F+YKS E AL+E
Sbjct: 248 IYVSNVGAELDPQKLLGFFSKFGEIEEGPLGLDKFTGRPKGFCLFVYKSAESAKRALEEP 307
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQ 254
K FEG +L C KA++G + K Q
Sbjct: 308 HKTFEGHILHCQKAIDGPKPGKQQ 331
>ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group]
gi|255673092|dbj|BAF04586.2| Os01g0265800, partial
[Oryza sativa Japonica Group]
Length = 524
Score = 100 bits (248), Expect = 3e-19
Identities = 45/82 (54%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FF+K+GEIEEGP G D+VTGK +GFA+F+YK+ + AL+E
Sbjct: 303 IFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEP 362
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 363 HKQFEGVVLHCQKAIDGPKPNK 384
>dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sativa Japonica Group]
gi|125525303|gb|EAY73417.1| hypothetical protein
OsI_01299 [Oryza sativa Indica Group]
gi|125569833|gb|EAZ11348.1| hypothetical protein
OsJ_01215 [Oryza sativa Japonica Group]
gi|215712214|dbj|BAG94341.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215766461|dbj|BAG98769.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 490
Score = 100 bits (248), Expect = 3e-19
Identities = 45/82 (54%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
++VSNVG ++DP KL FF+K+GEIEEGP G D+VTGK +GFA+F+YK+ + AL+E
Sbjct: 269 IFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEP 328
Query: 183 WKLFEGSLLQCTKALEGGQGNK 248
K FEG +L C KA++G + NK
Sbjct: 329 HKQFEGVVLHCQKAIDGPKPNK 350
>gb|AAM73765.1|AF403292_1 RNA-binding protein AKIP1 [Vicia faba]
Length = 515
Score = 100 bits (248), Expect = 3e-19
Identities = 44/88 (50%), Positives = 62/88 (70%)
Frame = +3
Query: 3 VYVSNVGPNVDPIKLRDFFAKFGEIEEGPFGCDRVTGKLRGFAIFLYKSTEGCNNALKER 182
+Y+SNVGP +DP KL +F++FGEIEEGP G D+ TGK +GF +F+YKS E +L+E
Sbjct: 253 IYISNVGPELDPHKLFAYFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRSLEEP 312
Query: 183 WKLFEGSLLQCTKALEGGQGNKNQILEP 266
K FEG +L C +A++G + K Q +P
Sbjct: 313 HKEFEGHILHCQRAIDGPKAGKTQHPQP 340