BLASTX nr result

ID: Akebia24_contig00028776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00028776
         (474 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007036454.1| ATP-dependent helicase/nuclease subunit A is...    57   2e-06
ref|XP_007036453.1| ATP-dependent helicase/nuclease subunit A is...    57   2e-06
ref|XP_002317005.1| hypothetical protein POPTR_0011s14370g [Popu...    57   2e-06
ref|XP_002511971.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|XP_007036454.1| ATP-dependent helicase/nuclease subunit A isoform 2, partial
           [Theobroma cacao] gi|508773699|gb|EOY20955.1|
           ATP-dependent helicase/nuclease subunit A isoform 2,
           partial [Theobroma cacao]
          Length = 105

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = -2

Query: 371 QKMVGSHSLKWGYFRXXXXXXXXXXXGFYFMHRLETSYKEKMKERLLKYEKERGRIDETS 192
           ++ +  +S+KWGY R           GFY MHR+E SYKEKMKERL +YE E  + ++ +
Sbjct: 40  ERKMAMNSVKWGYVRIITGTILGGVLGFYVMHRVEVSYKEKMKERLRQYETELKKKEKLN 99

Query: 191 EQE 183
           E E
Sbjct: 100 ELE 102


>ref|XP_007036453.1| ATP-dependent helicase/nuclease subunit A isoform 1 [Theobroma
           cacao] gi|508773698|gb|EOY20954.1| ATP-dependent
           helicase/nuclease subunit A isoform 1 [Theobroma cacao]
          Length = 118

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = -2

Query: 371 QKMVGSHSLKWGYFRXXXXXXXXXXXGFYFMHRLETSYKEKMKERLLKYEKERGRIDETS 192
           ++ +  +S+KWGY R           GFY MHR+E SYKEKMKERL +YE E  + ++ +
Sbjct: 53  ERKMAMNSVKWGYVRIITGTILGGVLGFYVMHRVEVSYKEKMKERLRQYETELKKKEKLN 112

Query: 191 EQE 183
           E E
Sbjct: 113 ELE 115


>ref|XP_002317005.1| hypothetical protein POPTR_0011s14370g [Populus trichocarpa]
           gi|222860070|gb|EEE97617.1| hypothetical protein
           POPTR_0011s14370g [Populus trichocarpa]
          Length = 63

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = -2

Query: 353 HSLKWGYFRXXXXXXXXXXXGFYFMHRLETSYKEKMKERLLKYEKERGRIDETSEQE 183
           +S KWGY R           GFY MHR+E SYKEKMKERL +YEKE  + +E  + E
Sbjct: 4   NSQKWGYVRIITGTILGGVLGFYVMHRVEVSYKEKMKERLREYEKELQKKEELKQLE 60


>ref|XP_002511971.1| conserved hypothetical protein [Ricinus communis]
           gi|223549151|gb|EEF50640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -2

Query: 350 SLKWGYFRXXXXXXXXXXXGFYFMHRLETSYKEKMKERLLKYEKERGRIDETSEQE 183
           SLKWGY R           GFY MHR E SYKEKMKERL +YE E  + ++ ++ E
Sbjct: 5   SLKWGYIRIISGTILGGILGFYVMHRAEVSYKEKMKERLKQYENELKKKEKLNQLE 60


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