BLASTX nr result

ID: Akebia24_contig00028729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00028729
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                41   3e-07
gb|AAT38756.2| Putative methyltransferase family protein [Solanu...    41   1e-06
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    41   2e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 41.2 bits (95), Expect(3) = 3e-07
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = -2

Query: 309 RIRNKRVHENVGIAPKCYKLRESQLRWLGHM*RR 208
           +IRN+ + E VG+A    KLRE++LRW GH+ RR
Sbjct: 598 KIRNEVIREKVGVASVVDKLREARLRWFGHVKRR 631



 Score = 33.1 bits (74), Expect(3) = 3e-07
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 217 VTEVNYLKRVGGRAKRTWIEILRTAINTFESTEVTTLD*IEWKNKI 80
           V  V   +R  GR K+ W E++R  +     TE  TLD  EW+++I
Sbjct: 642 VMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRI 687



 Score = 25.0 bits (53), Expect(3) = 3e-07
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 347 MRMLRWMIGKSKVEFETNEFMK 282
           MRMLRWM G ++ +   NE ++
Sbjct: 584 MRMLRWMCGHTRSDKIRNEVIR 605


>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score = 41.2 bits (95), Expect(3) = 1e-06
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = -2

Query: 309 RIRNKRVHENVGIAPKCYKLRESQLRWLGHM*RR 208
           +IRN+ + E VG+A    KLRE++LRW GH+ RR
Sbjct: 15  KIRNEVIREKVGVASVVDKLREARLRWFGHVKRR 48



 Score = 33.1 bits (74), Expect(3) = 1e-06
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 217 VTEVNYLKRVGGRAKRTWIEILRTAINTFESTEVTTLD*IEWKNKI 80
           V  V   +R  GR K+ W E++R  +     TE  TLD  EW+++I
Sbjct: 59  VMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRI 104



 Score = 22.7 bits (47), Expect(3) = 1e-06
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 347 MRMLRWMIGKSKVEFETNEFMK 282
           M MLRWM G ++ +   NE ++
Sbjct: 1   MSMLRWMCGHTRSDKIRNEVIR 22


>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 41.2 bits (95), Expect(3) = 2e-06
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = -2

Query: 309 RIRNKRVHENVGIAPKCYKLRESQLRWLGHM*RR 208
           +IRN+ + E VG+A    KLRE++LRW GH+ RR
Sbjct: 185 KIRNEVIREKVGVASVVDKLREARLRWFGHVRRR 218



 Score = 30.0 bits (66), Expect(3) = 2e-06
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 196 KRVGGRAKRTWIEILRTAINTFESTEVTTLD*IEWKNKI 80
           +R  GR K+ W E++R  +     TE  TLD   W+++I
Sbjct: 236 RRGRGRPKKYWGEVIRQDLAQLHITEDMTLDRKAWRSRI 274



 Score = 25.0 bits (53), Expect(3) = 2e-06
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 347 MRMLRWMIGKSKVEFETNEFMK 282
           MRMLRWM G ++ +   NE ++
Sbjct: 171 MRMLRWMCGHTRSDKIRNEVIR 192


Top