BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00028525
         (541 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007148352.1| hypothetical protein PHAVU_006G201000g [Phas...   130   1e-33
ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citr...   123   3e-33
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   130   4e-33
gb|EXB58671.1| hypothetical protein L484_003927 [Morus notabilis]     128   5e-33
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   133   7e-32
ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-31
ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containi...   124   3e-31
ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-28
ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containi...   128   1e-27
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   116   2e-27
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]   116   2e-27
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...   110   3e-27
ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutr...   108   1e-26
gb|EYU25777.1| hypothetical protein MIMGU_mgv1a021670mg [Mimulus...   122   4e-26
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...   108   2e-25
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...   108   2e-25
ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Caps...   104   2e-25
ref|XP_007015003.1| Tetratricopeptide repeat-like superfamily pr...   101   1e-21
gb|ABR17838.1| unknown [Picea sitchensis]                              97   1e-21
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-21

>ref|XP_007148352.1| hypothetical protein PHAVU_006G201000g [Phaseolus vulgaris]
           gi|561021575|gb|ESW20346.1| hypothetical protein
           PHAVU_006G201000g [Phaseolus vulgaris]
          Length = 607

 Score =  130 bits (328), Expect(2) = 1e-33
 Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRT-GDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           PKP+L+A V+SVCGR  G  R+GR+IHA V+ ++             D Y RC +   AL
Sbjct: 150 PKPELLASVVSVCGRKIGSRRIGRQIHALVVVDERIGHSVFLSTAFLDFYFRCDDYLMAL 209

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF+ M  +NE+SWTAMI+GC  N+ Y+ +   FRAMQA+G+ PNRVT I +L AC   G
Sbjct: 210 RVFDGMEVKNEVSWTAMISGCIANQDYDGAFACFRAMQAEGVFPNRVTSIALLQACAAPG 269

Query: 376 SREHGKQIHGYAIR 417
             +HGK+IHGYA R
Sbjct: 270 FLKHGKEIHGYAFR 283



 Score = 38.1 bits (87), Expect(2) = 1e-33
 Identities = 23/43 (53%), Positives = 27/43 (62%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GFES S  ++ALI+MYC CG  L   A +IFE    RDVV
Sbjct: 282 FRRGFESCSTFSSALINMYCHCGESLH-LAELIFEGSCCRDVV 323



 Score = 58.9 bits (141), Expect(2) = 5e-09
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
 Frame = +1

Query: 43  VISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKALGVFNWMME 219
           ++  C   G L+ G+EIH      +G            +MY  C E L  A  +F     
Sbjct: 261 LLQACAAPGFLKHGKEIHGYAFR-RGFESCSTFSSALINMYCHCGESLHLAELIFEGSCC 319

Query: 220 RNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGSREHGKQI 399
           R+ + W+++I   +     + ++E F  M+++  +PN VTL+ ++ ACT + S + G  +
Sbjct: 320 RDVVLWSSVIGSYSRRGDSHRALELFNKMRSEETEPNHVTLLAVISACTNISSLKCGCGL 379

Query: 400 HGYAIR 417
           HG+  +
Sbjct: 380 HGHVFK 385



 Score = 27.3 bits (59), Expect(2) = 5e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF     +  ALI+MY KCG +    +  IF  +  RD V
Sbjct: 384 FKCGFSFSISVGNALINMYAKCGCL--DGSRKIFLEMWNRDSV 424



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/128 (26%), Positives = 60/128 (46%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           EP    +  VIS C     L+ G  +H  V    G            +MY++C  LD + 
Sbjct: 354 EPNHVTLLAVISACTNISSLKCGCGLHGHVF-KCGFSFSISVGNALINMYAKCGCLDGSR 412

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F  M  R+ ++W+++I     +     +++ F  M+  G+KP+ +T++ +L AC   G
Sbjct: 413 KIFLEMWNRDSVTWSSLINAYGLHGCGKQALQLFYEMRERGVKPDAITILAVLSACNHAG 472

Query: 376 SREHGKQI 399
               G+QI
Sbjct: 473 LVAEGQQI 480


>ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citrus clementina]
           gi|557556380|gb|ESR66394.1| hypothetical protein
           CICLE_v10007840mg [Citrus clementina]
          Length = 580

 Score =  123 bits (309), Expect(2) = 3e-33
 Identities = 61/130 (46%), Positives = 84/130 (64%)
 Frame = +1

Query: 22  KPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALGV 201
           K +L+A +IS+C + G+L LGR+IHA VI +              D+YS+C     AL V
Sbjct: 128 KAELLAGIISLCSQIGELELGRQIHALVIVDGSFELSVFVSTALLDLYSKCHHWLIALRV 187

Query: 202 FNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGSR 381
           F  M+ RNE+SWTAMI+GC  +++Y+  ++ FRAMQ +G+KP RVTL  +L AC EL   
Sbjct: 188 FEQMVIRNEVSWTAMISGCIDSQNYDTGIDLFRAMQREGVKPTRVTLTIVLLACAELRDL 247

Query: 382 EHGKQIHGYA 411
            +GK IHGYA
Sbjct: 248 RNGKAIHGYA 257



 Score = 44.3 bits (103), Expect(2) = 3e-33
 Identities = 22/43 (51%), Positives = 29/43 (67%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           +  GF+ + HL+AAL+ MYC+C   L P A IIFER   +DVV
Sbjct: 258 YCCGFDFDHHLSAALMHMYCECTEALHP-ARIIFERTKVKDVV 299



 Score = 58.5 bits (140), Expect(2) = 5e-09
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKA 192
           +P    +  V+  C    DLR G+ IH    +  G             MY  C E L  A
Sbjct: 228 KPTRVTLTIVLLACAELRDLRNGKAIHGYA-YCCGFDFDHHLSAALMHMYCECTEALHPA 286

Query: 193 LGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTEL 372
             +F     ++ + W+++I G + +   + +M+ F  M+ + I+PN VTL+ IL +CT  
Sbjct: 287 RIIFERTKVKDVVIWSSIIRGYSQSGDLSEAMKLFSRMRLERIEPNSVTLLAILSSCTRQ 346

Query: 373 GSREHGKQIHGYAIR 417
               HG  +H Y ++
Sbjct: 347 SFLSHGLGVHCYIMK 361



 Score = 27.7 bits (60), Expect(2) = 5e-09
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           G   +  +  AL++MY KCG++ S  +  IF  +  RD V
Sbjct: 363 GLNFDVSIGNALMNMYSKCGSITS--SHQIFNEMAARDFV 400



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/124 (27%), Positives = 59/124 (47%)
 Frame = +1

Query: 4   LSNHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFEL 183
           L   EP    +  ++S C R   L  G  +H  ++   G            +MYS+C  +
Sbjct: 326 LERIEPNSVTLLAILSSCTRQSFLSHGLGVHCYIM-KAGLNFDVSIGNALMNMYSKCGSI 384

Query: 184 DKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPAC 363
             +  +FN M  R+ +SWT +I+G   +     +++ F  MQ  G++P+ +T++ IL AC
Sbjct: 385 TSSHQIFNEMAARDFVSWTTLISGYGFHGYGEEALQLFLEMQESGVEPDAITVLAILSAC 444

Query: 364 TELG 375
              G
Sbjct: 445 NHAG 448


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  130 bits (326), Expect(2) = 4e-33
 Identities = 63/134 (47%), Positives = 86/134 (64%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           PKP+L+A V+S+CGR    ++GR+IHA V+ N+             D Y RC +   AL 
Sbjct: 150 PKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALR 209

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF+ M  +N +SWT MI+GC  ++ Y+ +   FRAMQA+G+ PNRVT I +L AC E G 
Sbjct: 210 VFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGF 269

Query: 379 REHGKQIHGYAIRH 420
            +HGK+IHGYA RH
Sbjct: 270 VKHGKEIHGYAFRH 283



 Score = 37.4 bits (85), Expect(2) = 4e-33
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GFES    ++AL++MYC+CG  +   A +IFE    RDVV
Sbjct: 281 FRHGFESCPSFSSALVNMYCQCGEPMH-LAELIFEGSSFRDVV 322



 Score = 63.9 bits (154), Expect(2) = 8e-10
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 43  VISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKALGVFNWMME 219
           ++S C   G ++ G+EIH     + G            +MY +C E +  A  +F     
Sbjct: 260 LLSACAEPGFVKHGKEIHGYAFRH-GFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSF 318

Query: 220 RNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGSREHGKQI 399
           R+ + W+++I   +       +++ F  M+ + I+PN VTL+ ++ ACT L S +HG  +
Sbjct: 319 RDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGL 378

Query: 400 HGYAIR 417
           HGY  +
Sbjct: 379 HGYIFK 384



 Score = 25.0 bits (53), Expect(2) = 8e-10
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAV 487
           F  GF     +  ALI+MY KCG +
Sbjct: 383 FKFGFCFSISVGNALINMYAKCGCL 407


>gb|EXB58671.1| hypothetical protein L484_003927 [Morus notabilis]
          Length = 574

 Score =  128 bits (322), Expect(2) = 5e-33
 Identities = 62/134 (46%), Positives = 86/134 (64%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           PKP+LIA ++S   +T + RLGR IHA V+ ++             D Y RC     A  
Sbjct: 145 PKPELIAGILS---QTSEWRLGRAIHALVVTDERIRDSVFLSTALVDFYFRCCCSSTAFN 201

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VFN M ERNE++WTA+I+GC  +  +N ++   RAMQ +G+ PNRVT++ ILP C ELG 
Sbjct: 202 VFNRMAERNEVTWTAVISGCAASLDFNRALHSVRAMQVEGVSPNRVTMMAILPVCAELGY 261

Query: 379 REHGKQIHGYAIRH 420
            +HGK+IHG+A+RH
Sbjct: 262 IKHGKEIHGHAVRH 275



 Score = 38.5 bits (88), Expect(2) = 5e-33
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           G   + H +AAL+ MYCKC    S AA +IFE    RDVV
Sbjct: 276 GIHLDPHFSAALVHMYCKCEGA-SVAAELIFESSSVRDVV 314



 Score = 67.4 bits (163), Expect(2) = 2e-12
 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           P    +  ++ VC   G ++ G+EIH   + + G             MY +C     A  
Sbjct: 244 PNRVTMMAILPVCAELGYIKHGKEIHGHAVRH-GIHLDPHFSAALVHMYCKCEGASVAAE 302

Query: 199 -VFNWMMERNEISWTAMIAGCTTNESYNM-SMEFFRAMQADGIKPNRVTLIEILPACTEL 372
            +F     R+ + W+++I G +++      +++ F  MQ +G KPN VTL+ ++ A T L
Sbjct: 303 LIFESSSVRDVVLWSSIIGGYSSHHGREAKAVKLFNQMQVEGTKPNSVTLLAVISASTSL 362

Query: 373 GSREHGKQIHGYAIRHRL 426
            S + G+++HGY+++  L
Sbjct: 363 SSLDLGREVHGYSLQSGL 380



 Score = 30.4 bits (67), Expect(2) = 2e-12
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           G  S+  +  ALIDMY KCG +   +A  IF  +  RD V
Sbjct: 379 GLNSDIFVGNALIDMYAKCGCI--DSACQIFVEMPTRDSV 416



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 37/134 (27%), Positives = 64/134 (47%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           +P    +  VIS       L LGRE+H   + + G            DMY++C  +D A 
Sbjct: 346 KPNSVTLLAVISASTSLSSLDLGREVHGYSLQS-GLNSDIFVGNALIDMYAKCGCIDSAC 404

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F  M  R+ +SW+ +I G   +     +++ F  MQ  G++ + +T++ +L AC+  G
Sbjct: 405 QIFVEMPTRDSVSWSTLICGHGLHGYGEHALQLFHEMQKGGLEADEITILAVLSACSHAG 464

Query: 376 SREHGKQIHGYAIR 417
               G++I   A R
Sbjct: 465 LVTEGQKIFHQASR 478


>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  133 bits (335), Expect(2) = 7e-32
 Identities = 65/134 (48%), Positives = 90/134 (67%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           PKP+L+A V+SVC R GD++LGR IHA V+ +              D Y +  +   AL 
Sbjct: 125 PKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALR 184

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF+ +  +N +SWTA+++GC+ N  YNM+++ FRAMQ +G++PNRVTLI ILPA  ELG 
Sbjct: 185 VFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGC 244

Query: 379 REHGKQIHGYAIRH 420
            + GK+IHGYA RH
Sbjct: 245 AKTGKEIHGYAFRH 258



 Score = 29.6 bits (65), Expect(2) = 7e-32
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF+ + H  ++LI +YC+    L   A + FER   +DVV
Sbjct: 256 FRHGFDLDHHFLSSLIHIYCRSREGLQ-LAKLTFERSNVKDVV 297



 Score = 55.8 bits (133), Expect(2) = 2e-08
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKAL 195
           P    +  ++      G  + G+EIH     + G             +Y R  E L  A 
Sbjct: 227 PNRVTLIAILPAFAELGCAKTGKEIHGYAFRH-GFDLDHHFLSSLIHIYCRSREGLQLAK 285

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
             F     ++ + W+++I     +     +++ FR M+ADG +PN VTL+ ++ ACT L 
Sbjct: 286 LTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLT 345

Query: 376 SREHGKQIHGYAIR 417
           S ++G   HGY ++
Sbjct: 346 SLKNGYGTHGYIVK 359



 Score = 28.5 bits (62), Expect(2) = 2e-08
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           G   ++++  ALI+MY KCG V+  A+  IF+ +  +D V
Sbjct: 361 GLNFDTYIGNALINMYSKCGCVV--ASHQIFKEMHIKDSV 398


>ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum tuberosum]
          Length = 599

 Score =  129 bits (323), Expect(2) = 2e-31
 Identities = 66/134 (49%), Positives = 85/134 (63%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           PKP+LIA VIS C +  +L+LGR IHA  + ++             D Y +C E D A  
Sbjct: 148 PKPELIASVISACIQIKNLKLGRAIHALTVVDERMETSIFLTTALVDFYWKCCEPDLAFL 207

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF  M  +NE+SWTAMI+GC   E Y  ++E FR+MQ + +KPNRVTL  ILPAC EL  
Sbjct: 208 VFQRMEVKNEVSWTAMISGCIAEELYARAVELFRSMQLENVKPNRVTLTSILPACAEL-- 265

Query: 379 REHGKQIHGYAIRH 420
            ++GK+IHGYA RH
Sbjct: 266 -KYGKEIHGYAFRH 278



 Score = 33.1 bits (74), Expect(2) = 2e-31
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF+ ++  ++A++ MY  CG  L P    +F+R   +DVV
Sbjct: 276 FRHGFDLDTKFSSAIVHMYSGCGEALQPMKN-VFDRSTNKDVV 317



 Score = 66.6 bits (161), Expect(2) = 1e-10
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
 Frame = +1

Query: 4   LSNHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE- 180
           L N +P    +  ++  C    +L+ G+EIH     + G             MYS C E 
Sbjct: 245 LENVKPNRVTLTSILPACA---ELKYGKEIHGYAFRH-GFDLDTKFSSAIVHMYSGCGEA 300

Query: 181 LDKALGVFNWMMERNEISWTAMIAGCTTNESY-NMSMEFFRAMQADGIKPNRVTLIEILP 357
           L     VF+    ++ + WTA+I   T N+S    +++ F  M   GI+PN VTL+ ++ 
Sbjct: 301 LQPMKNVFDRSTNKDVVMWTALITSYTRNKSSCEEAIKLFNEMLLSGIQPNDVTLLALIS 360

Query: 358 ACTELGSREHGKQIHGYA 411
           A T L S  HG+ +HGYA
Sbjct: 361 ASTNLLSVCHGRGMHGYA 378



 Score = 25.0 bits (53), Expect(2) = 1e-10
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRD 535
           F  G  S   +  +LI+MY KCG +   A   +F+ +  R+
Sbjct: 379 FTSGLSSHLFIGNSLINMYSKCGFLKDSAQ--VFQEMSIRN 417



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/140 (30%), Positives = 61/140 (43%)
 Frame = +1

Query: 4   LSNHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFEL 183
           LS  +P    +  +IS       +  GR +H       G            +MYS+C  L
Sbjct: 345 LSGIQPNDVTLLALISASTNLLSVCHGRGMHGYAF-TSGLSSHLFIGNSLINMYSKCGFL 403

Query: 184 DKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPAC 363
             +  VF  M  RN  SW+A+I    T+   N ++E F  M+  GIK + + L+ IL AC
Sbjct: 404 KDSAQVFQEMSIRNSASWSALINAYGTHGFGNKALELFNEMKESGIKTDSIALLAILSAC 463

Query: 364 TELGSREHGKQIHGYAIRHR 423
              G  E  K+I   A + R
Sbjct: 464 NHCGLFEEAKKIFNEASKDR 483


>ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Cicer arietinum]
          Length = 621

 Score =  124 bits (310), Expect(2) = 3e-31
 Identities = 64/138 (46%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRT--GDLRLGREIHARVIHNQGXXXXXXXXXXXX--DMYSRCFELD 186
           PKP+L+A ++S+CGR      R GR+IH  V+ +                D Y RC E  
Sbjct: 163 PKPELLASMVSMCGRKMGSGSRKGRQIHGLVVVDGRIQIQHSVFLSTAFVDFYFRCGESL 222

Query: 187 KALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACT 366
            AL VF+ M  RNE+SWTA I+GCT N+ Y+++ E FR MQ +G+KPNRVTLI +L AC 
Sbjct: 223 MALSVFDGMEVRNEVSWTAAISGCTANQDYDVAFECFREMQVEGVKPNRVTLIALLAACE 282

Query: 367 ELGSREHGKQIHGYAIRH 420
             G  ++GK+IHGY  RH
Sbjct: 283 RPGFAKYGKEIHGYGFRH 300



 Score = 37.0 bits (84), Expect(2) = 3e-31
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF S    ++ALI++YC+CG  L   A +IFER   RDVV
Sbjct: 298 FRHGFNSCHSFSSALINVYCQCGESLH-FAELIFERSSLRDVV 339



 Score = 60.8 bits (146), Expect(2) = 2e-08
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKA 192
           +P    +  +++ C R G  + G+EIH     + G            ++Y +C E L  A
Sbjct: 268 KPNRVTLIALLAACERPGFAKYGKEIHGYGFRH-GFNSCHSFSSALINVYCQCGESLHFA 326

Query: 193 LGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTEL 372
             +F     R+ + W+++I   +       +++ F  M+ +  +PN VTL+ ++ ACT L
Sbjct: 327 ELIFERSSLRDVVLWSSIIGSYSRRGESVKALKLFNKMRTEETEPNYVTLLAVISACTNL 386

Query: 373 GSREHGKQIHGYAIRHRL*VRISPC 447
            S +HG  +H Y ++  L   I  C
Sbjct: 387 SSLKHGSGVHCYILKFGLDFSIFVC 411



 Score = 23.1 bits (48), Expect(2) = 2e-08
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAV 487
           G +    +  ALI+MY KCG +
Sbjct: 403 GLDFSIFVCNALINMYAKCGCL 424



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/128 (25%), Positives = 60/128 (46%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           EP    +  VIS C     L+ G  +H  ++   G            +MY++C  LD +L
Sbjct: 370 EPNYVTLLAVISACTNLSSLKHGSGVHCYIL-KFGLDFSIFVCNALINMYAKCGCLDDSL 428

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F     R+ ++W+++I+    +     +++ F  M+  G+ P+ VT + +L AC   G
Sbjct: 429 KIFLETPNRDSVTWSSLISAYGLHGCGEQALQLFYEMKERGVTPDAVTFLAVLSACNHAG 488

Query: 376 SREHGKQI 399
               GKQ+
Sbjct: 489 LVTEGKQV 496


>ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum lycopersicum]
          Length = 603

 Score =  120 bits (300), Expect(2) = 2e-28
 Identities = 61/134 (45%), Positives = 83/134 (61%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           PKP+LIA V+  C +T + +LGR IHA  I ++             D Y +C E D A  
Sbjct: 149 PKPELIASVVPACVQTKNFKLGRAIHALTIVDERMETSILLTTALVDFYWKCCEPDLAFL 208

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF  M  +NE+SWTAMI+GC   + +  ++E FR+MQ + +KPNRVTL  +LPAC EL  
Sbjct: 209 VFQRMEVKNEVSWTAMISGCVAEKLHIEAVELFRSMQFENVKPNRVTLTSLLPACAEL-- 266

Query: 379 REHGKQIHGYAIRH 420
            ++GK+I GYA RH
Sbjct: 267 -KYGKEIQGYAFRH 279



 Score = 31.6 bits (70), Expect(2) = 2e-28
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF+S++  ++A++ MY  CG  L      +F+R   +DVV
Sbjct: 277 FRHGFDSDAKFSSAVVHMYSGCGGALQTIKN-VFDRSTKKDVV 318



 Score = 62.4 bits (150), Expect(2) = 1e-09
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
 Frame = +1

Query: 10  NHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCF-ELD 186
           N +P    +  ++  C    +L+ G+EI      + G             MYS C   L 
Sbjct: 248 NVKPNRVTLTSLLPACA---ELKYGKEIQGYAFRH-GFDSDAKFSSAVVHMYSGCGGALQ 303

Query: 187 KALGVFNWMMERNEISWTAMIAGCTTNESY-NMSMEFFRAMQADGIKPNRVTLIEILPAC 363
               VF+   +++ + WTA+I   T N+S    +++ F  M   GI+PN VTL+ ++ AC
Sbjct: 304 TIKNVFDRSTKKDVVMWTALITSYTRNKSSCREAIKLFNEMLLSGIQPNDVTLLALICAC 363

Query: 364 TELGSREHGKQIHGYA 411
           T L S  HG+ +HGYA
Sbjct: 364 TNLLSVCHGRGMHGYA 379



 Score = 25.8 bits (55), Expect(2) = 1e-09
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRD 535
           F  G  S   +  +LI+MY KCG +   A    F+ +  RD
Sbjct: 380 FTSGLSSHLFIGNSLINMYSKCGFLKDSAQA--FQEMSIRD 418



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 40/140 (28%), Positives = 61/140 (43%)
 Frame = +1

Query: 4   LSNHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFEL 183
           LS  +P    +  +I  C     +  GR +H       G            +MYS+C  L
Sbjct: 346 LSGIQPNDVTLLALICACTNLLSVCHGRGMHGYAF-TSGLSSHLFIGNSLINMYSKCGFL 404

Query: 184 DKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPAC 363
             +   F  M  R+  SW+A+I    T+   + ++E F  M+  GIK + + L+ IL AC
Sbjct: 405 KDSAQAFQEMSIRDSASWSALINAYGTHGFGDKALELFNEMKESGIKTDSIALLAILSAC 464

Query: 364 TELGSREHGKQIHGYAIRHR 423
              G  E GK+I   A + R
Sbjct: 465 NHCGLSEEGKEIFDEASKDR 484


>ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 584

 Score =  128 bits (321), Expect = 1e-27
 Identities = 67/146 (45%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = +1

Query: 22  KPKLIARVISVCGRTGDLRLGREIHARVI-HNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           KP+LIA ++SVC RT   R GR+IH  V+  ++             D+Y RC +   A  
Sbjct: 134 KPELIASIVSVCARTRKYRQGRQIHGLVVVDDKINEESVFLSTALLDLYMRCNQTLTAFY 193

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF  M  +N +SWTAMI+GC  N+ Y M+M  FR MQ  G+KPNRVT++ ILPAC ELG 
Sbjct: 194 VFYNMQVKNGVSWTAMISGCIANQCYGMAMNCFREMQVQGLKPNRVTVLAILPACAELGD 253

Query: 379 REHGKQIHGYAIRHRL*VRISPCCSS 456
             HGK+IH Y  RH       P CS+
Sbjct: 254 IGHGKEIHAYTYRHGF--ESDPHCSA 277



 Score = 62.8 bits (151), Expect(2) = 1e-09
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMY-SRCFELDKA 192
           +P    +  ++  C   GD+  G+EIHA   +  G             MY  R  E+  A
Sbjct: 235 KPNRVTVLAILPACAELGDIGHGKEIHAYT-YRHGFESDPHCSAALIHMYCKRGNEMRPA 293

Query: 193 LGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTEL 372
             +F  +  ++ + W++MI   +       +++ F  M+A GI PN VTL+ I+  CT L
Sbjct: 294 ELIFEKVSLKDVVMWSSMIGSYSQCGDSVKALQLFSRMRAGGIDPNSVTLLAIISTCTSL 353

Query: 373 GSREHGKQIHGYAIRHRL 426
            S + G  +H Y ++  L
Sbjct: 354 SSLQIGCGVHSYVLKSGL 371



 Score = 25.8 bits (55), Expect(2) = 1e-09
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAV 487
           G  S+  +  ALI+MY KCG +
Sbjct: 370 GLNSDIFIGNALINMYAKCGCL 391



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 34/133 (25%), Positives = 64/133 (48%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           +P    +  +IS C     L++G  +H+ V+ + G            +MY++C  L  + 
Sbjct: 337 DPNSVTLLAIISTCTSLSSLQIGCGVHSYVLKS-GLNSDIFIGNALINMYAKCGCLTDSH 395

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F  M   + +SW+ M+     +   N +++ F  MQ  GI+P+ V+ + +L AC   G
Sbjct: 396 KIFKEMPSIDSVSWSTMVESFGRHGRGNEALKLFLEMQDRGIEPDAVSFLSVLSACNHAG 455

Query: 376 SREHGKQIHGYAI 414
             E GK+I  + +
Sbjct: 456 LVEEGKKIFKHMV 468


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  116 bits (291), Expect(2) = 2e-27
 Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDL--RLGREIHARVIHNQGXXXXXXXXXXXX--DMYSRCFELD 186
           PKP+L+A ++S+CGR  DL  R+GR+IH  V+ +                D Y RC +  
Sbjct: 165 PKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSL 224

Query: 187 KALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACT 366
            A  VF+ M  +NE+SWTA+I+GC  N+ Y++++  +R MQ +G+ PNRVTLI +L AC 
Sbjct: 225 MARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACA 284

Query: 367 ELGSREHGKQIHGYAIR 417
             G  ++GK+IHGYA R
Sbjct: 285 RPGFVKYGKEIHGYAFR 301



 Score = 31.6 bits (70), Expect(2) = 2e-27
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF+S    + ALI +YC+CG  L   A  IFE    RDVV
Sbjct: 300 FRRGFDSCHSFSPALIYLYCECGQSLH-LAERIFEGSSLRDVV 341



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKAL 195
           P    +  +++ C R G ++ G+EIH      +G             +Y  C + L  A 
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFR-RGFDSCHSFSPALIYLYCECGQSLHLAE 329

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F     R+ + W+++I         + +++ F  M+ +  +PN VTL+ ++ ACT L 
Sbjct: 330 RIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLS 389

Query: 376 SREHGKQIHGYAIRHRL*VRISPC 447
           S +HG  IHGY ++  +   I  C
Sbjct: 390 SFKHGGVIHGYILKFGIGFSIFVC 413



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/128 (25%), Positives = 58/128 (45%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           EP    +  VIS C      + G  IH  ++   G            +MY++C  LD + 
Sbjct: 372 EPNYVTLLAVISACTNLSSFKHGGVIHGYIL-KFGIGFSIFVCNALINMYAKCGSLDDSR 430

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F  M  R+ ++W +MI+    +     +++ F  M+  G+K + VT + +L AC   G
Sbjct: 431 KIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAG 490

Query: 376 SREHGKQI 399
               G+Q+
Sbjct: 491 LVTEGQQL 498


>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 460

 Score =  116 bits (291), Expect(2) = 2e-27
 Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDL--RLGREIHARVIHNQGXXXXXXXXXXXX--DMYSRCFELD 186
           PKP+L+A ++S+CGR  DL  R+GR+IH  V+ +                D Y RC +  
Sbjct: 165 PKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSL 224

Query: 187 KALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACT 366
            A  VF+ M  +NE+SWTA+I+GC  N+ Y++++  +R MQ +G+ PNRVTLI +L AC 
Sbjct: 225 MARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACA 284

Query: 367 ELGSREHGKQIHGYAIR 417
             G  ++GK+IHGYA R
Sbjct: 285 RPGFVKYGKEIHGYAFR 301



 Score = 31.6 bits (70), Expect(2) = 2e-27
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF+S    + ALI +YC+CG  L   A  IFE    RDVV
Sbjct: 300 FRRGFDSCHSFSPALIYLYCECGQSLH-LAERIFEGSSLRDVV 341



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE-LDKAL 195
           P    +  +++ C R G ++ G+EIH      +G             +Y  C + L  A 
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFR-RGFDSCHSFSPALIYLYCECGQSLHLAE 329

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F     R+ + W+++I         + +++ F  M+ +  +PN VTL+ ++ ACT L 
Sbjct: 330 RIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLS 389

Query: 376 SREHGKQIHGYAIRHRL*VRISPC 447
           S +HG  IHGY ++  +   I  C
Sbjct: 390 SFKHGGVIHGYILKFGIGFSIFVC 413


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  110 bits (274), Expect(2) = 3e-27
 Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDL-RLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           PK +L+A ++++C R G   ++ R +HA V+ ++             DMY +  +   A 
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMLHALVLVDERIQESVLLSTALLDMYLKFDDPAAAF 205

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF+ M  +NE+SWTAMI+GC  N +Y + ++FFRAMQ + ++PNRVTL+ +LPAC ELG
Sbjct: 206 HVFDQMELKNEVSWTAMISGCVANYNYEVGIDFFRAMQRENLRPNRVTLLSVLPACVELG 265

Query: 376 -SREHGKQIHGYAIRH 420
                 K+IHG++ RH
Sbjct: 266 YGLRLVKEIHGFSFRH 281



 Score = 37.4 bits (85), Expect(2) = 3e-27
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF S+  L AA + MYC+CG+V    + ++FE    RDVV
Sbjct: 279 FRHGFHSDDRLIAAFMTMYCRCGSV--SLSRLLFETSKVRDVV 319



 Score = 57.4 bits (137), Expect(2) = 2e-11
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
 Frame = +1

Query: 10  NHEPKPKLIARVISVCGRTG-DLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELD 186
           N  P    +  V+  C   G  LRL +EIH     + G             MY RC  + 
Sbjct: 246 NLRPNRVTLLSVLPACVELGYGLRLVKEIHGFSFRH-GFHSDDRLIAAFMTMYCRCGSVS 304

Query: 187 KALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACT 366
            +  +F     R+ + W++MI+G   N   + +M     M+ +G +PN VTL+ ++ ACT
Sbjct: 305 LSRLLFETSKVRDVVMWSSMISGYAENGDCSEAMNLLSQMRKEGSEPNSVTLLAVVSACT 364

Query: 367 ELGSREHGKQIHGYAIR 417
              S +    +H   ++
Sbjct: 365 HSASLKIASTVHSQILK 381



 Score = 37.0 bits (84), Expect(2) = 2e-11
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GF S   L+ ALIDMY KCG++  PAA  +F  L  +D+V
Sbjct: 383 GFMSHILLSNALIDMYAKCGSL--PAAREVFYELNEKDLV 420



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/141 (23%), Positives = 66/141 (46%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           EP    +  V+S C  +  L++   +H++++   G            DMY++C  L  A 
Sbjct: 350 EPNSVTLLAVVSACTHSASLKIASTVHSQIL-KCGFMSHILLSNALIDMYAKCGSLPAAR 408

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF  + E++ +SW++MI     +   + ++E F+ M   G + + +  + +L AC   G
Sbjct: 409 EVFYELNEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKAGHEVDGMAFLAVLSACNHAG 468

Query: 376 SREHGKQIHGYAIRHRL*VRI 438
             E  + I   A ++ + V +
Sbjct: 469 LVEEAQTIFTQAGKYHMPVTL 489


>ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutrema salsugineum]
           gi|557113804|gb|ESQ54087.1| hypothetical protein
           EUTSA_v10024712mg [Eutrema salsugineum]
          Length = 602

 Score =  108 bits (270), Expect(2) = 1e-26
 Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDL-RLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           PK +L+A ++++C R G   ++ R +HA  + ++             DMY +  +   A 
Sbjct: 149 PKSELVASLLALCTRMGSSSKVARMLHALFLVDERMQGSVLLATALVDMYLKFNDPGAAF 208

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF+ M  +NE+SWTAMI+GC  N +Y MS+  F AMQ + ++PNRVTL+ ILPAC ELG
Sbjct: 209 HVFDQMEVKNEVSWTAMISGCVMNHNYEMSIGLFLAMQRENVRPNRVTLLSILPACVELG 268

Query: 376 S-REHGKQIHGYAIRH 420
           S     K+IHG++ RH
Sbjct: 269 SGLRMVKEIHGFSFRH 284



 Score = 37.0 bits (84), Expect(2) = 1e-26
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF S+  L AAL+ MYC+CG V    + ++F+    RDVV
Sbjct: 282 FRHGFHSDGRLTAALMTMYCRCGYV--SLSRLLFKESKVRDVV 322



 Score = 56.2 bits (134), Expect(2) = 1e-10
 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
 Frame = +1

Query: 10  NHEPKPKLIARVISVCGRTGD-LRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELD 186
           N  P    +  ++  C   G  LR+ +EIH     + G             MY RC  + 
Sbjct: 249 NVRPNRVTLLSILPACVELGSGLRMVKEIHGFSFRH-GFHSDGRLTAALMTMYCRCGYVS 307

Query: 187 KALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACT 366
            +  +F     R+ + W++MI G       + +M     M+ +G +PN VTL+ I+ ACT
Sbjct: 308 LSRLLFKESKVRDVVMWSSMIGGYADTGDCSEAMNLLSQMRKEGTEPNSVTLLSIVSACT 367

Query: 367 ELGSREHGKQIHGYAIR 417
              S     +IH + ++
Sbjct: 368 HSASFRFASRIHSHILK 384



 Score = 35.4 bits (80), Expect(2) = 1e-10
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GF S   L  ALIDMY KCG++L  AA  +F  L  +D+V
Sbjct: 386 GFMSNILLGNALIDMYAKCGSLL--AARKVFYELNEKDLV 423


>gb|EYU25777.1| hypothetical protein MIMGU_mgv1a021670mg [Mimulus guttatus]
          Length = 607

 Score =  122 bits (307), Expect = 4e-26
 Identities = 61/134 (45%), Positives = 82/134 (61%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           PKP+L+A  +S C ++ + RLGR IHA V  ++             + Y +    D A  
Sbjct: 156 PKPELVASCLSTCIKSENWRLGRAIHALVFLDERIECTSFVATSLVNFYWKLDNSDAAFR 215

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF+ ++ERNE+SWTAMI GC  +  Y  +  FFR MQ + IKPN+VTL+ ILPAC EL S
Sbjct: 216 VFDGIVERNEVSWTAMITGCIEDRDYIKAFAFFRMMQCEDIKPNKVTLVSILPACAELHS 275

Query: 379 REHGKQIHGYAIRH 420
              G++IHGYA RH
Sbjct: 276 ISLGEEIHGYAFRH 289



 Score = 69.3 bits (168), Expect(2) = 2e-11
 Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           +P    +  ++  C     + LG EIH     + G             MY +   L  A 
Sbjct: 257 KPNKVTLVSILPACAELHSISLGEEIHGYAFRH-GYDLDARFLSALLHMYCKFGALHIAK 315

Query: 196 GVFNWMMERNEISWTAMIAGCTTN-ESYNMSMEFFRAMQADGIKPNRVTLIEILPACTEL 372
            +F+  +++  + W++MIAG + + +S   +++ F  MQ DGI+PN VTL+ ++ AC  L
Sbjct: 316 LIFDRSLKKEIVMWSSMIAGYSHDKDSARQAIKLFNEMQMDGIQPNSVTLLALISACNNL 375

Query: 373 GSREHGKQIHGYAIRHRL 426
            S   G  +HGY ++  L
Sbjct: 376 LSVTDGSGVHGYGLKSGL 393



 Score = 25.0 bits (53), Expect(2) = 2e-11
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 452 ALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           ALIDMY KCG+     +  +F+ +  RD +
Sbjct: 403 ALIDMYYKCGSFQD--SVKVFDEMPTRDCI 430


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score =  108 bits (270), Expect(2) = 2e-25
 Identities = 54/136 (39%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDL-RLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           PK +L+A ++++C R G   ++ R  HA V+ ++             DMY +  +   A 
Sbjct: 157 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 216

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF+ M  +NE+SWTAMI+GC  N++Y M ++ FRAMQ + ++PNRVTL+ +LPAC EL 
Sbjct: 217 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELN 276

Query: 376 -SREHGKQIHGYAIRH 420
                 K+IHG++ RH
Sbjct: 277 YGSSLVKEIHGFSFRH 292



 Score = 32.7 bits (73), Expect(2) = 2e-25
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  G  ++  L AA + MYC+CG V    + ++FE    RDVV
Sbjct: 290 FRHGCHADERLTAAFMTMYCRCGNV--SLSRVLFETSKVRDVV 330



 Score = 46.2 bits (108), Expect(2) = 7e-07
 Identities = 23/86 (26%), Positives = 40/86 (46%)
 Frame = +1

Query: 160 MYSRCFELDKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVT 339
           MY RC  +  +  +F     R+ + W++MI+G       +  M     M+ +GI+ N VT
Sbjct: 307 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 366

Query: 340 LIEILPACTELGSREHGKQIHGYAIR 417
           L+ I+ ACT          +H   ++
Sbjct: 367 LLAIVSACTNSTLLSFASTVHSQILK 392



 Score = 32.7 bits (73), Expect(2) = 7e-07
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GF S   L  ALIDMY KCG++   AA  +F  L  +D+V
Sbjct: 394 GFMSHILLGNALIDMYAKCGSL--SAAREVFYELTEKDLV 431


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score =  108 bits (270), Expect(2) = 2e-25
 Identities = 54/136 (39%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDL-RLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           PK +L+A ++++C R G   ++ R  HA V+ ++             DMY +  +   A 
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF+ M  +NE+SWTAMI+GC  N++Y M ++ FRAMQ + ++PNRVTL+ +LPAC EL 
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELN 265

Query: 376 -SREHGKQIHGYAIRH 420
                 K+IHG++ RH
Sbjct: 266 YGSSLVKEIHGFSFRH 281



 Score = 32.7 bits (73), Expect(2) = 2e-25
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  G  ++  L AA + MYC+CG V    + ++FE    RDVV
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNV--SLSRVLFETSKVRDVV 319



 Score = 46.2 bits (108), Expect(2) = 7e-07
 Identities = 23/86 (26%), Positives = 40/86 (46%)
 Frame = +1

Query: 160 MYSRCFELDKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVT 339
           MY RC  +  +  +F     R+ + W++MI+G       +  M     M+ +GI+ N VT
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355

Query: 340 LIEILPACTELGSREHGKQIHGYAIR 417
           L+ I+ ACT          +H   ++
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILK 381



 Score = 32.7 bits (73), Expect(2) = 7e-07
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GF S   L  ALIDMY KCG++   AA  +F  L  +D+V
Sbjct: 383 GFMSHILLGNALIDMYAKCGSL--SAAREVFYELTEKDLV 420


>ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Capsella rubella]
           gi|482552081|gb|EOA16274.1| hypothetical protein
           CARUB_v10004419mg [Capsella rubella]
          Length = 598

 Score =  104 bits (259), Expect(2) = 2e-25
 Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRT-GDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           PK +L+A ++++C R   + ++ R +HA V+ ++             DMY +  +   + 
Sbjct: 146 PKSELVASLLALCTRVESNSKVARMLHALVLVDERMQGSVLLSTALVDMYFKFDDHAASF 205

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            VF+ M  +NE+SWTAMI+GC  N +Y M +E FRAMQ + + PNRVT++ +LPAC ELG
Sbjct: 206 HVFDQMKVKNEVSWTAMISGCVANHNYEMGIEMFRAMQREKLIPNRVTVLSVLPACVELG 265

Query: 376 S-REHGKQIHGYAIRH 420
           S     K+IHG++ R+
Sbjct: 266 SGLRLLKEIHGFSFRY 281



 Score = 37.0 bits (84), Expect(2) = 2e-25
 Identities = 19/43 (44%), Positives = 25/43 (58%)
 Frame = +2

Query: 413 FAIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           F  GF SE  L A+L+ MYC+CG V    + ++F     RDVV
Sbjct: 279 FRYGFHSEDRLTASLMTMYCRCGNV--SLSRLLFSTSKVRDVV 319



 Score = 56.6 bits (135), Expect(2) = 4e-09
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGD-LRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           P    +  V+  C   G  LRL +EIH       G             MY RC  +  + 
Sbjct: 249 PNRVTVLSVLPACVELGSGLRLLKEIHG-FSFRYGFHSEDRLTASLMTMYCRCGNVSLSR 307

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F+    R+ + W++MI+G      ++ +M     M+ +G +PN VTL+ ++ ACT   
Sbjct: 308 LLFSTSKVRDVVMWSSMISGYAETGDFSEAMNLLSQMRKEGSEPNSVTLLAVVSACTHSA 367

Query: 376 SREHGKQIHGYAIR 417
           S      IH   ++
Sbjct: 368 SLTFASTIHSQILK 381



 Score = 30.0 bits (66), Expect(2) = 4e-09
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GF S   +  A+IDMY KCG++   AA  ++  L  +D+V
Sbjct: 383 GFMSHILVGNAIIDMYAKCGSL--RAAREVYYELNEKDLV 420


>ref|XP_007015003.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508785366|gb|EOY32622.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 630

 Score =  101 bits (251), Expect(2) = 1e-21
 Identities = 48/142 (33%), Positives = 74/142 (52%)
 Frame = +1

Query: 1   CLSNHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFE 180
           C  N  P    +  V+S C R GDL LG +IH  + +               D+Y +C +
Sbjct: 231 CRENLRPDKMTLVVVLSACSRLGDLSLGTQIHENICNFHDIGSDVFVDNALVDVYMKCGD 290

Query: 181 LDKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPA 360
           +D A  +FN M  +N +SW +MI+G      +  +++ F  MQ  G+KP+ VTL+ +L A
Sbjct: 291 VDSARQLFNLMPVKNVVSWNSMISGLVQQGQFKEALDVFHDMQKIGLKPDNVTLVAVLNA 350

Query: 361 CTELGSREHGKQIHGYAIRHRL 426
           C  LG  E GK +H Y  ++R+
Sbjct: 351 CGNLGKLEFGKWVHAYVDKNRI 372



 Score = 27.7 bits (60), Expect(2) = 1e-21
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 428 ESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDV 538
           +++  +  AL+DMY KCG+V    A  +F  +  RDV
Sbjct: 373 KADGFIGNALVDMYAKCGSV--EQAFGVFHSMKCRDV 407



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 42/125 (33%), Positives = 64/125 (51%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           +P    +  V++ CG  G L  G+ +HA V  N+             DMY++C  +++A 
Sbjct: 338 KPDNVTLVAVLNACGNLGKLEFGKWVHAYVDKNR-IKADGFIGNALVDMYAKCGSVEQAF 396

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
           GVF+ M  R+  S+TAMI G   N     ++E F  M   G+KP+ VT + +L AC+  G
Sbjct: 397 GVFHSMKCRDVFSYTAMIVGFAMNGEAERALEIFAEMPVVGVKPDDVTFVGVLSACSHAG 456

Query: 376 SREHG 390
             E G
Sbjct: 457 LVEEG 461



 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 33/128 (25%), Positives = 58/128 (45%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           P    I  V+  C +   L  G++IHA  I                 +Y+ C  +D    
Sbjct: 136 PDTYTIPYVLKACAKFHALEEGQQIHAHSI-KFNLNSNVYVLNTLMRLYAVCGIIDYVRN 194

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           +F+   ER+ +SWT +I           +++ +  M  + ++P+++TL+ +L AC+ LG 
Sbjct: 195 LFDQSPERDLVSWTTIIQAFVKTGFAKEAIQAYFDMCRENLRPDKMTLVVVLSACSRLGD 254

Query: 379 REHGKQIH 402
              G QIH
Sbjct: 255 LSLGTQIH 262



 Score = 22.7 bits (47), Expect(2) = 2e-06
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 452 ALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           AL+D+Y KCG V   +A  +F  +  ++VV
Sbjct: 280 ALVDVYMKCGDV--DSARQLFNLMPVKNVV 307


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 94.4 bits (233), Expect(2) = 1e-21
 Identities = 48/134 (35%), Positives = 73/134 (54%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           +P    +  V+ VC     L  G++IH   I + G            +MY++C  ++ A 
Sbjct: 218 KPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-GIESDVLVVNGLVNMYAKCGNVNTAH 276

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F  M  R+  SW A+I G + N  ++ ++ FF  MQ  GIKPN +T++ +LPAC  L 
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLF 336

Query: 376 SREHGKQIHGYAIR 417
           + E G+QIHGYAIR
Sbjct: 337 ALEQGQQIHGYAIR 350



 Score = 34.3 bits (77), Expect(2) = 1e-21
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GFES   +  AL++MY KCG V S  A  +FER+  ++VV
Sbjct: 352 GFESNDVVGNALVNMYAKCGNVNS--AYKLFERMPKKNVV 389



 Score = 97.1 bits (240), Expect(2) = 4e-21
 Identities = 51/133 (38%), Positives = 73/133 (54%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           P   +   VI  CG   DL+ GR++H  +I  +G             MY++C  L+ A  
Sbjct: 118 PDKLVFLSVIKACGSQSDLQAGRKVHEDIIA-RGFESDVIVGTALASMYTKCGSLENARQ 176

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           VF+ M +R+ +SW A+IAG + N     ++  F  MQ +GIKPN  TL+ ++P C  L +
Sbjct: 177 VFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA 236

Query: 379 REHGKQIHGYAIR 417
            E GKQIH YAIR
Sbjct: 237 LEQGKQIHCYAIR 249



 Score = 30.0 bits (66), Expect(2) = 4e-21
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDV 538
           G ES+  +   L++MY KCG V    A  +FER+  RDV
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNV--NTAHKLFERMPIRDV 287



 Score = 82.4 bits (202), Expect(2) = 6e-18
 Identities = 42/134 (31%), Positives = 70/134 (52%)
 Frame = +1

Query: 16  EPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKAL 195
           +P    +  V+  C     L  G++IH   I + G            +MY++C  ++ A 
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAY 377

Query: 196 GVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELG 375
            +F  M ++N ++W A+I+G + +   + ++  F  MQA GIKP+   ++ +LPAC    
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437

Query: 376 SREHGKQIHGYAIR 417
           + E GKQIHGY IR
Sbjct: 438 ALEQGKQIHGYTIR 451



 Score = 33.9 bits (76), Expect(2) = 6e-18
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GFES   +   L+D+Y KCG V    A  +FER+  +DVV
Sbjct: 453 GFESNVVVGTGLVDIYAKCGNV--NTAQKLFERMPEQDVV 490



 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 15/63 (23%), Positives = 31/63 (49%)
 Frame = +1

Query: 214 MERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGSREHGK 393
           +  N + W   I G   N  +N ++  +  MQ  GI P+++  + ++ AC      + G+
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 394 QIH 402
           ++H
Sbjct: 141 KVH 143



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +2

Query: 416 AIGFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           A GFES+  +  AL  MY KCG++ +  A  +F+R+  RDVV
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLEN--ARQVFDRMPKRDVV 187


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score = 87.4 bits (215), Expect(2) = 2e-21
 Identities = 43/125 (34%), Positives = 73/125 (58%)
 Frame = +1

Query: 43  VISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALGVFNWMMER 222
           ++ VCG   DLR G+EIH ++I N G            +MY++C  +++A  +F+ M ER
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVN-GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPER 239

Query: 223 NEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGSREHGKQIH 402
           + + W  +I+G   N     ++E    MQ +G +P+ +T++ ILPA  ++GS   G+ IH
Sbjct: 240 DLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIH 299

Query: 403 GYAIR 417
           GY++R
Sbjct: 300 GYSMR 304



 Score = 40.8 bits (94), Expect(2) = 2e-21
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = +2

Query: 422 GFESESHLAAALIDMYCKCGAVLSPAATIIFERLGGRDVV 541
           GFES  +++ AL+DMY KCG+V    A +IF+R+ G+ VV
Sbjct: 306 GFESFVNVSTALVDMYSKCGSV--GTARLIFDRMTGKTVV 343



 Score = 73.2 bits (178), Expect(2) = 1e-13
 Identities = 38/124 (30%), Positives = 59/124 (47%)
 Frame = +1

Query: 46  ISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALGVFNWMMERN 225
           +  C   GD+  GR +H +++                 MYS+C  +D A  +F  +  + 
Sbjct: 384 LHACADLGDVEQGRFVH-KLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442

Query: 226 EISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGSREHGKQIHG 405
            +SW AMI G   N   N ++++F  MQ   IKP+  T++ ++PA  EL      K IHG
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502

Query: 406 YAIR 417
             IR
Sbjct: 503 LVIR 506



 Score = 28.9 bits (63), Expect(2) = 1e-13
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 443 LAAALIDMYCKCGAVLSPAATIIFERLGGRDV 538
           +A AL+DMY KCGAV    A  +F+ +  R V
Sbjct: 515 VATALVDMYAKCGAV--HTARKLFDMMDERHV 544



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/128 (29%), Positives = 59/128 (46%)
 Frame = +1

Query: 19  PKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFELDKALG 198
           P    I  ++      G LR+GR IH   +   G            DMYS+C  +  A  
Sbjct: 274 PDSITIVSILPAVADVGSLRIGRSIHGYSMR-AGFESFVNVSTALVDMYSKCGSVGTARL 332

Query: 199 VFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPACTELGS 378
           +F+ M  +  +SW +MI G   N     +ME F+ M  + ++   VT++  L AC +LG 
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD 392

Query: 379 REHGKQIH 402
            E G+ +H
Sbjct: 393 VEQGRFVH 400



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/134 (31%), Positives = 60/134 (44%)
 Frame = +1

Query: 4   LSNHEPKPKLIARVISVCGRTGDLRLGREIHARVIHNQGXXXXXXXXXXXXDMYSRCFEL 183
           L N +P    +  VI        L   + IH  VI                DMY++C  +
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTC-LDKNVFVATALVDMYAKCGAV 529

Query: 184 DKALGVFNWMMERNEISWTAMIAGCTTNESYNMSMEFFRAMQADGIKPNRVTLIEILPAC 363
             A  +F+ M ER+  +W AMI G  T+     ++E F  M+ + IKPN VT + +L AC
Sbjct: 530 HTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSAC 589

Query: 364 TELGSREHGKQIHG 405
           +  G  E G Q  G
Sbjct: 590 SHSGLVEEGFQYFG 603