BLASTX nr result

ID: Akebia24_contig00028395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00028395
         (750 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]        50   2e-15
dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]       50   2e-15
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...    46   4e-15
dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]       50   5e-15
gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]               50   6e-15
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]       50   6e-15
gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]        50   8e-15
dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]       50   8e-15
dbj|BAO53260.1| reverse transcriptase [Cauliflower mosaic virus]       50   8e-15
emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]     50   1e-14
dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]       50   1e-14
dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]       50   1e-14
dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]...    50   1e-14
dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]       50   1e-14
dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]       50   1e-14
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu...    50   1e-14
sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Inclu...    50   1e-14
ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus...    50   1e-14
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]        50   1e-14
dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]...    50   1e-14

>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 49.7 bits (117), Expect(3) = 2e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 440 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 495



 Score = 41.6 bits (96), Expect(3) = 2e-15
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 550

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + +D   + IC Y S  FKA
Sbjct: 551 DYWGGMLKAIKINEDTNTELICRYASGSFKA 581



 Score = 37.4 bits (85), Expect(3) = 2e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 612 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669


>dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 49.7 bits (117), Expect(3) = 2e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494



 Score = 41.6 bits (96), Expect(3) = 2e-15
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + +D   + IC Y S  FKA
Sbjct: 550 DYWGGMLKAIKINEDTNTELICRYASGSFKA 580



 Score = 37.4 bits (85), Expect(3) = 2e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score = 45.8 bits (107), Expect(3) = 4e-15
 Identities = 22/54 (40%), Positives = 35/54 (64%)
 Frame = -2

Query: 740 VDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLS 579
           VDFL  H+ +G+ ++QPH+  +  +FP +   K Q Q+FLG VN+  +FI  L+
Sbjct: 192 VDFLGMHIHKGQYSLQPHIAKQLEDFPDENLTKKQVQQFLGIVNYMTDFIKGLT 245



 Score = 45.8 bits (107), Expect(3) = 4e-15
 Identities = 24/74 (32%), Positives = 38/74 (51%)
 Frame = -1

Query: 564 RKVMKNTPYN*TQKATIDVQLLKKIWQTLPPSEPRYEGPFILAIDTTNETWVIALLKKDG 385
           ++++K  P   T   T  V+ +K + Q LP  +    G  IL  D ++E W   LL++  
Sbjct: 252 QQILKKNPLAWTNVQTAAVRKIKALTQNLPAQQIPSNGKRILQTDASDEYWGAILLEERD 311

Query: 384 KDKRICGYTSRQFK 343
             ++ICGY S  FK
Sbjct: 312 NHRQICGYKSGHFK 325



 Score = 36.2 bits (82), Expect(3) = 4e-15
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = -3

Query: 298 FNKNLIGETFILQIDSSTLATFM--KRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*H 125
           F  +LIG  F +++D S+    +  K+K + N++L R+  W    S++ F  + +  K +
Sbjct: 348 FQIHLIGHHFQIEMDMSSFPRMLHFKQKTIPNSQLLRWAXW---FSRFDFQVKHIKGKNN 404

Query: 124 HLPNTLTR 101
            LP+ LTR
Sbjct: 405 TLPDMLTR 412


>dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 49.7 bits (117), Expect(3) = 5e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494



 Score = 40.4 bits (93), Expect(3) = 5e-15
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + K    + IC Y S  FKA
Sbjct: 550 DYWGGMLKAIKINKGTNTELICRYASGSFKA 580



 Score = 37.4 bits (85), Expect(3) = 5e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668


>gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]
          Length = 675

 Score = 49.7 bits (117), Expect(3) = 6e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 440 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 495



 Score = 40.0 bits (92), Expect(3) = 6e-15
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQAFPPLHHPLPEEKLIIETDASD 550

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 551 DYWGGMLKAIKINEGTNTELICRYASGSFKA 581



 Score = 37.4 bits (85), Expect(3) = 6e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 612 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669


>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 49.7 bits (117), Expect(3) = 6e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494



 Score = 40.0 bits (92), Expect(3) = 6e-15
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + +    + IC Y S  FKA
Sbjct: 550 DYWGGMLKAIQINESANTELICRYASGSFKA 580



 Score = 37.4 bits (85), Expect(3) = 6e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668


>gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 49.7 bits (117), Expect(3) = 8e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 440 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 495



 Score = 39.7 bits (91), Expect(3) = 8e-15
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 550

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + +    + IC Y S  FKA
Sbjct: 551 DYWGGMLKAIKINEGANTELICRYASGSFKA 581



 Score = 37.4 bits (85), Expect(3) = 8e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 612 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669


>dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 49.7 bits (117), Expect(3) = 8e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494



 Score = 39.7 bits (91), Expect(3) = 8e-15
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + +    + IC Y S  FKA
Sbjct: 550 DYWGGMLKAIKINEGSNTELICRYASGSFKA 580



 Score = 37.4 bits (85), Expect(3) = 8e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668


>dbj|BAO53260.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 49.7 bits (117), Expect(3) = 8e-15
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494



 Score = 39.7 bits (91), Expect(3) = 8e-15
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549

Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
           + W   L    + +    + IC Y S  FKA
Sbjct: 550 DYWGGMLKAIKINEGANTELICRYASGSFKA 580



 Score = 37.4 bits (85), Expect(3) = 8e-15
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668


>emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]
          Length = 680

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 445 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 500



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 496 PKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 555

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 556 DYWGGMLKAIKINEGTNTELICRYASGSFKA 586



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 617 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 674


>dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|591288602|dbj|BAO53414.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|293185|gb|AAA62375.1| reverse
           transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|130592|sp|P03554.1|POL_CAMVS RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58826|emb|CAA23460.1|
           unnamed protein product [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673


>dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|591288586|dbj|BAO53400.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 678

 Score = 49.7 bits (117), Expect(3) = 1e-14
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
           +++FL   + EG    Q H+L   N FP  LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 443 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 498



 Score = 39.3 bits (90), Expect(3) = 1e-14
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -1

Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
           PK+  I K +  K+ +N P+  T++ T+ +Q +KK  Q  PP   P  E   I+  D ++
Sbjct: 494 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 553

Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
           + W   + A+   +G + + IC Y S  FKA
Sbjct: 554 DYWGGMLKAIKINEGTNTELICRYASGSFKA 584



 Score = 37.4 bits (85), Expect(3) = 1e-14
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -3

Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
           F+++ D++   +F+      ++KL R + WQ  LS YSF  E +    +H  + L+RE
Sbjct: 615 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 672


Top