BLASTX nr result
ID: Akebia24_contig00028395
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00028395
(750 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus] 50 2e-15
dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus] 50 2e-15
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein... 46 4e-15
dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus] 50 5e-15
gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus] 50 6e-15
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus] 50 6e-15
gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus] 50 8e-15
dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus] 50 8e-15
dbj|BAO53260.1| reverse transcriptase [Cauliflower mosaic virus] 50 8e-15
emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus] 50 1e-14
dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus] 50 1e-14
dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus] 50 1e-14
dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]... 50 1e-14
dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus] 50 1e-14
dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus] 50 1e-14
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu... 50 1e-14
sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Inclu... 50 1e-14
ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus... 50 1e-14
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus] 50 1e-14
dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]... 50 1e-14
>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 49.7 bits (117), Expect(3) = 2e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 440 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 495
Score = 41.6 bits (96), Expect(3) = 2e-15
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 550
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + +D + IC Y S FKA
Sbjct: 551 DYWGGMLKAIKINEDTNTELICRYASGSFKA 581
Score = 37.4 bits (85), Expect(3) = 2e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 612 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669
>dbj|BAO53351.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 49.7 bits (117), Expect(3) = 2e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494
Score = 41.6 bits (96), Expect(3) = 2e-15
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + +D + IC Y S FKA
Sbjct: 550 DYWGGMLKAIKINEDTNTELICRYASGSFKA 580
Score = 37.4 bits (85), Expect(3) = 2e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668
>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
Length = 758
Score = 45.8 bits (107), Expect(3) = 4e-15
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = -2
Query: 740 VDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLS 579
VDFL H+ +G+ ++QPH+ + +FP + K Q Q+FLG VN+ +FI L+
Sbjct: 192 VDFLGMHIHKGQYSLQPHIAKQLEDFPDENLTKKQVQQFLGIVNYMTDFIKGLT 245
Score = 45.8 bits (107), Expect(3) = 4e-15
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = -1
Query: 564 RKVMKNTPYN*TQKATIDVQLLKKIWQTLPPSEPRYEGPFILAIDTTNETWVIALLKKDG 385
++++K P T T V+ +K + Q LP + G IL D ++E W LL++
Sbjct: 252 QQILKKNPLAWTNVQTAAVRKIKALTQNLPAQQIPSNGKRILQTDASDEYWGAILLEERD 311
Query: 384 KDKRICGYTSRQFK 343
++ICGY S FK
Sbjct: 312 NHRQICGYKSGHFK 325
Score = 36.2 bits (82), Expect(3) = 4e-15
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = -3
Query: 298 FNKNLIGETFILQIDSSTLATFM--KRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*H 125
F +LIG F +++D S+ + K+K + N++L R+ W S++ F + + K +
Sbjct: 348 FQIHLIGHHFQIEMDMSSFPRMLHFKQKTIPNSQLLRWAXW---FSRFDFQVKHIKGKNN 404
Query: 124 HLPNTLTR 101
LP+ LTR
Sbjct: 405 TLPDMLTR 412
>dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 49.7 bits (117), Expect(3) = 5e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494
Score = 40.4 bits (93), Expect(3) = 5e-15
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + K + IC Y S FKA
Sbjct: 550 DYWGGMLKAIKINKGTNTELICRYASGSFKA 580
Score = 37.4 bits (85), Expect(3) = 5e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668
>gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]
Length = 675
Score = 49.7 bits (117), Expect(3) = 6e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 440 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 495
Score = 40.0 bits (92), Expect(3) = 6e-15
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQAFPPLHHPLPEEKLIIETDASD 550
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 551 DYWGGMLKAIKINEGTNTELICRYASGSFKA 581
Score = 37.4 bits (85), Expect(3) = 6e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 612 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669
>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 49.7 bits (117), Expect(3) = 6e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494
Score = 40.0 bits (92), Expect(3) = 6e-15
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + + + IC Y S FKA
Sbjct: 550 DYWGGMLKAIQINESANTELICRYASGSFKA 580
Score = 37.4 bits (85), Expect(3) = 6e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668
>gb|AGT42077.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 49.7 bits (117), Expect(3) = 8e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 440 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 495
Score = 39.7 bits (91), Expect(3) = 8e-15
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 491 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 550
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + + + IC Y S FKA
Sbjct: 551 DYWGGMLKAIKINEGANTELICRYASGSFKA 581
Score = 37.4 bits (85), Expect(3) = 8e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 612 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669
>dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 49.7 bits (117), Expect(3) = 8e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494
Score = 39.7 bits (91), Expect(3) = 8e-15
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + + + IC Y S FKA
Sbjct: 550 DYWGGMLKAIKINEGSNTELICRYASGSFKA 580
Score = 37.4 bits (85), Expect(3) = 8e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668
>dbj|BAO53260.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 49.7 bits (117), Expect(3) = 8e-15
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 439 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 494
Score = 39.7 bits (91), Expect(3) = 8e-15
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 490 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 549
Query: 420 ETWVIAL----LKKDGKDKRICGYTSRQFKA 340
+ W L + + + IC Y S FKA
Sbjct: 550 DYWGGMLKAIKINEGANTELICRYASGSFKA 580
Score = 37.4 bits (85), Expect(3) = 8e-15
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 611 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 668
>emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]
Length = 680
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 445 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 500
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 496 PKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 555
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 556 DYWGGMLKAIKINEGTNTELICRYASGSFKA 586
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 617 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 674
>dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]
gi|591288602|dbj|BAO53414.1| reverse transcriptase
[Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|293185|gb|AAA62375.1| reverse
transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus]
gi|130592|sp|P03554.1|POL_CAMVS RecName: Full=Enzymatic
polyprotein; Includes: RecName: Full=Aspartic protease;
Includes: RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase gi|58826|emb|CAA23460.1|
unnamed protein product [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 444 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 499
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 495 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 554
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 555 DYWGGMLKAIKINEGTNTELICRYASGSFKA 585
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 616 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 673
>dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]
gi|591288586|dbj|BAO53400.1| reverse transcriptase
[Cauliflower mosaic virus]
Length = 678
Score = 49.7 bits (117), Expect(3) = 1e-14
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2
Query: 743 QVDFLEDHLVEGKINMQPHVL*KNNNFPHQLEGKLQCQRFLGCVNHAREFIPKLSQ 576
+++FL + EG Q H+L N FP LE K Q QRFLG + +A ++IPKL+Q
Sbjct: 443 KINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQ 498
Score = 39.3 bits (90), Expect(3) = 1e-14
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = -1
Query: 591 PKI--ISKHISRKVMKNTPYN*TQKATIDVQLLKKIWQTLPP-SEPRYEGPFILAIDTTN 421
PK+ I K + K+ +N P+ T++ T+ +Q +KK Q PP P E I+ D ++
Sbjct: 494 PKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASD 553
Query: 420 ETW---VIALLKKDGKD-KRICGYTSRQFKA 340
+ W + A+ +G + + IC Y S FKA
Sbjct: 554 DYWGGMLKAIKINEGTNTELICRYASGSFKA 584
Score = 37.4 bits (85), Expect(3) = 1e-14
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -3
Query: 271 FILQIDSSTLATFMKRKIVSNTKLQRYVWWQFLLSQYSFTNEQVARK*HHLPNTLTRE 98
F+++ D++ +F+ ++KL R + WQ LS YSF E + +H + L+RE
Sbjct: 615 FLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 672