BLASTX nr result
ID: Akebia24_contig00028148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00028148
(516 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007202098.1| hypothetical protein PRUPE_ppa007568mg [Prun... 248 6e-64
ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote... 247 1e-63
ref|XP_006829965.1| hypothetical protein AMTR_s00127p00033470 [A... 246 2e-63
ref|XP_004288032.1| PREDICTED: heterogeneous nuclear ribonucleop... 243 2e-62
ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol... 243 3e-62
gb|EXB54400.1| Uncharacterized RNA-binding protein [Morus notabi... 240 2e-61
ref|XP_003517301.1| PREDICTED: heterogeneous nuclear ribonucleop... 240 2e-61
ref|XP_006590656.1| PREDICTED: heterogeneous nuclear ribonucleop... 239 2e-61
ref|XP_006466598.1| PREDICTED: heterogeneous nuclear ribonucleop... 239 3e-61
ref|XP_006425902.1| hypothetical protein CICLE_v10025943mg [Citr... 239 3e-61
ref|XP_006425901.1| hypothetical protein CICLE_v10025943mg [Citr... 239 3e-61
ref|XP_007156799.1| hypothetical protein PHAVU_002G018500g [Phas... 239 4e-61
ref|NP_568011.1| RNA recognition motif-containing protein [Arabi... 239 4e-61
ref|XP_006411923.1| hypothetical protein EUTSA_v10025462mg [Eutr... 238 5e-61
ref|XP_004511926.1| PREDICTED: heterogeneous nuclear ribonucleop... 238 5e-61
gb|EYU44403.1| hypothetical protein MIMGU_mgv1a008369mg [Mimulus... 238 6e-61
ref|XP_002866967.1| RNA recognition motif-containing protein [Ar... 238 6e-61
ref|XP_007047269.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 238 8e-61
ref|XP_007047268.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 238 8e-61
ref|XP_007047267.1| RNA-binding family protein isoform 2 [Theobr... 238 8e-61
>ref|XP_007202098.1| hypothetical protein PRUPE_ppa007568mg [Prunus persica]
gi|462397629|gb|EMJ03297.1| hypothetical protein
PRUPE_ppa007568mg [Prunus persica]
Length = 363
Score = 248 bits (633), Expect = 6e-64
Identities = 119/146 (81%), Positives = 134/146 (91%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+ KLVVLGIPWD+DT+GLR+YMSKFGELED IVMK+RSTGRSRGFGYATF SAEDAKNA
Sbjct: 1 MDRKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKDRSTGRSRGFGYATFASAEDAKNA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
+SEH+LGNRMLEVK+A PKEEMR ++K TRIFVARIPQ VTE +FRS+FE YG+ITDL
Sbjct: 61 ASSEHFLGNRMLEVKIATPKEEMRAPARKVTRIFVARIPQVVTEATFRSHFEKYGDITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQGSK HRGIGFITFE+ADSV+
Sbjct: 121 YMPKDQGSKMHRGIGFITFENADSVE 146
Score = 84.3 bits (207), Expect = 2e-14
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 48/184 (26%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R + K+G++ D+ + K++ + RG G+ TF +A+ +N +A
Sbjct: 92 RIFVARIPQVVTEATFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFENADSVENLMAD 151
Query: 265 EHYLGNRMLEVKVAIPKEE-------------------MRTSSKKAT------------- 348
H LG + V A PKE+ + +++ A
Sbjct: 152 THELGGSTVVVDRATPKEDDFRPVGRMAQGGYGAYNAYISAATRYAALGAPTLYDHPGPV 211
Query: 349 ----------------RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIG 480
+IFV R+PQ T E R YF +G I D+Y+P+D GHRG G
Sbjct: 212 PGPAFPRGESARGLGKKIFVGRLPQEATAEDLRQYFGRFGRIADVYVPRDPKRTGHRGFG 271
Query: 481 FITF 492
F+TF
Sbjct: 272 FVTF 275
>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
1 [Vitis vinifera] gi|359480890|ref|XP_003632540.1|
PREDICTED: uncharacterized RNA-binding protein
C660.15-like isoform 2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product
[Vitis vinifera]
Length = 359
Score = 247 bits (630), Expect = 1e-63
Identities = 124/147 (84%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+NKLVVLGIPWDVDTDGLR YMSKFGEL+DVIVMKERSTGRSRGFGY TF S EDAK
Sbjct: 1 MDNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKV 60
Query: 256 LASEHYLGNRMLEVKVAIPKEE-MRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITD 432
L+SEH+LGNRMLEVKVA PKEE MR KK TRIFVARIP SV E +FRSYFETYGEITD
Sbjct: 61 LSSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITD 120
Query: 433 LYMPKDQGSKGHRGIGFITFESADSVD 513
LYMPKD GSKGHRGIGFITF SA+SVD
Sbjct: 121 LYMPKDHGSKGHRGIGFITFASAESVD 147
Score = 90.5 bits (223), Expect = 2e-16
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 44/180 (24%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V+ R Y +GE+ D+ + K+ + RG G+ TF SAE N +
Sbjct: 93 RIFVARIPDSVNEAAFRSYFETYGEITDLYMPKDHGSKGHRGIGFITFASAESVDNLMVE 152
Query: 265 EHYLGNRMLEVKVAIPKEEM---------------------------------------- 324
H LG + V A PKEE
Sbjct: 153 THELGGSAVVVDRATPKEEEFRPVSRVPQGGYGAYNAYITAATRYAALGAPTLYDHPGSV 212
Query: 325 --RTSSKKAT--RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
R S +A +IFV R+PQ + E R YF +G I D+Y+PKD GHRG GF+TF
Sbjct: 213 YGRGESTRAMGKKIFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 272
>ref|XP_006829965.1| hypothetical protein AMTR_s00127p00033470 [Amborella trichopoda]
gi|548835604|gb|ERM97381.1| hypothetical protein
AMTR_s00127p00033470 [Amborella trichopoda]
Length = 413
Score = 246 bits (629), Expect = 2e-63
Identities = 119/148 (80%), Positives = 131/148 (88%)
Frame = +1
Query: 73 LMENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKN 252
+MENKLVVLGIPWDVDT+GLR YMSKFGELED IVMKERSTGRSRGFGY TF SAEDAK
Sbjct: 50 IMENKLVVLGIPWDVDTEGLRDYMSKFGELEDAIVMKERSTGRSRGFGYVTFASAEDAKK 109
Query: 253 ALASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITD 432
L ++H LG+RMLEVKVA P+EEMR SKK TRIFVARIP SVTE FR YFETYGEITD
Sbjct: 110 VLETQHILGSRMLEVKVATPREEMRAPSKKITRIFVARIPHSVTEAMFREYFETYGEITD 169
Query: 433 LYMPKDQGSKGHRGIGFITFESADSVDT 516
LYMPKDQ +KGHRGIGF+T+E+++SVDT
Sbjct: 170 LYMPKDQTTKGHRGIGFVTYENSESVDT 197
Score = 85.5 bits (210), Expect = 7e-15
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 46/182 (25%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R+Y +GE+ D+ + K+++T RG G+ T+ ++E +A
Sbjct: 142 RIFVARIPHSVTEAMFREYFETYGEITDLYMPKDQTTKGHRGIGFVTYENSESVDTLMAE 201
Query: 265 EHYLGNRMLEVKVAIPKEEMRTSSKKAT-------------------------------- 348
H LG + V A PKE+ +A
Sbjct: 202 THELGGSTIVVDRATPKEDEIRQPMRAPPGGYGAYNAYITAATRYAVQGAPTLYDHPSSV 261
Query: 349 --------------RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFI 486
+IF+ R+PQ T E R YF +G I D Y+PKD GHRG GF+
Sbjct: 262 YGRGVSGAAHGMGKKIFIGRLPQEATVEDLRQYFVKFGRILDAYIPKDPKRTGHRGFGFV 321
Query: 487 TF 492
TF
Sbjct: 322 TF 323
>ref|XP_004288032.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Fragaria vesca subsp. vesca]
Length = 364
Score = 243 bits (620), Expect = 2e-62
Identities = 117/147 (79%), Positives = 133/147 (90%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+ KLVVLGIPWD+DT+GLR+YM K+GELED IVMKERSTGRSRGFGY TF SAEDAK+
Sbjct: 1 MDRKLVVLGIPWDIDTEGLREYMCKYGELEDCIVMKERSTGRSRGFGYVTFASAEDAKSV 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
+SEH+LGNRMLEVKVA PKEEMRT ++K TRIFVARIPQSVTE +FRS+F YGEITDL
Sbjct: 61 ASSEHFLGNRMLEVKVATPKEEMRTPARKVTRIFVARIPQSVTEANFRSHFGKYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVDT 516
YMPK+QGSK HRGIGFITFE+ADSV++
Sbjct: 121 YMPKEQGSKMHRGIGFITFENADSVES 147
Score = 82.0 bits (201), Expect = 8e-14
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 53/189 (28%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R + K+GE+ D+ + KE+ + RG G+ TF +A+ ++ +
Sbjct: 92 RIFVARIPQSVTEANFRSHFGKYGEITDLYMPKEQGSKMHRGIGFITFENADSVESLMVD 151
Query: 265 EHYLGNRMLEVKVAIPK------------------------------------------- 315
H LG + V A PK
Sbjct: 152 THELGGSNVVVDRATPKEDDFKPVARMPAAQQGGYGAYNAYISAATRYAALGAPTLYDHP 211
Query: 316 ----------EEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKG 465
E R S+K IFV R+PQ T E R YF +G I D+Y+P+D G
Sbjct: 212 PHPGPAYGRGESARGLSRK---IFVGRLPQEATSEDLRQYFGRFGRILDVYVPRDPKRTG 268
Query: 466 HRGIGFITF 492
HRG GF+TF
Sbjct: 269 HRGFGFVTF 277
>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
Length = 377
Score = 243 bits (619), Expect = 3e-62
Identities = 118/146 (80%), Positives = 131/146 (89%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+ KLVVLGIPWDVDT+GLR+YMSKFGELED IVMKERSTGRSRGFGY TF + EDAKNA
Sbjct: 1 MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L+SEH+LGNRM+EVKVA PKEEMR K+ TRIFVARI Q+VTE +FRS+FE YGEITDL
Sbjct: 61 LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQGSK HRGIGFITF S+DSV+
Sbjct: 121 YMPKDQGSKTHRGIGFITFASSDSVE 146
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +1
Query: 178 MKERSTGRSRGFG-YATFVSAEDAKNALASE---HYLGNRMLEVKVAIPKEEMRTSSKKA 345
M + G G+G Y ++SA AL + + G+ + +P E R KK
Sbjct: 178 MPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLE-FRGMGKK- 235
Query: 346 TRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
IFV R+PQ + + R YF +G I D+Y+PKD GHRG GF+TF
Sbjct: 236 --IFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 282
>gb|EXB54400.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 360
Score = 240 bits (612), Expect = 2e-61
Identities = 118/146 (80%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWDVDTDGLR YM+KFGELED IVMKERSTGRSRGFGY TF S EDAKNA
Sbjct: 1 MERKLVVLGIPWDVDTDGLRDYMTKFGELEDCIVMKERSTGRSRGFGYVTFASEEDAKNA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L+ EH+L NRMLEVKVA PKEEMR +KK TRIFVARIPQSV + +F+S+FE YGEITDL
Sbjct: 61 LSGEHFLRNRMLEVKVATPKEEMRAPAKKVTRIFVARIPQSVAKATFQSHFEKYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQGS HRGIGFITF +A+SVD
Sbjct: 121 YMPKDQGSTTHRGIGFITFANAESVD 146
Score = 85.9 bits (211), Expect = 5e-15
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 46/182 (25%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V + + K+GE+ D+ + K++ + RG G+ TF +AE N +A
Sbjct: 92 RIFVARIPQSVAKATFQSHFEKYGEITDLYMPKDQGSTTHRGIGFITFANAESVDNLMAE 151
Query: 265 EHYLGNRMLEVKVAIPKEE-------------------MRTSSKKAT------------- 348
H LG + V A PKE+ + +++ A
Sbjct: 152 THELGGSTVVVDRATPKEDDFRPIGRMAQGGYGAYNAYISAATRYAALGAPTLYDHPGTM 211
Query: 349 --------------RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFI 486
+IFV R+PQ T E R YF +G I D+Y+P+D GHRG GF+
Sbjct: 212 YGNGRGESTRGLGKKIFVGRLPQEATIEDLRQYFGRFGRILDVYIPRDPKRSGHRGFGFV 271
Query: 487 TF 492
TF
Sbjct: 272 TF 273
>ref|XP_003517301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
max]
Length = 362
Score = 240 bits (612), Expect = 2e-61
Identities = 118/145 (81%), Positives = 127/145 (87%)
Frame = +1
Query: 79 ENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNAL 258
+ KLVVLGIPWD+DT+GLR+YMSKFGELED IVMKERSTGRSRGFGY TF S +DAK L
Sbjct: 3 QRKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVL 62
Query: 259 ASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLY 438
+SEH LGNR LEVKVA PKEEMR KK TRIFVARIPQSVTE +FRS+FE YGEITDLY
Sbjct: 63 SSEHILGNRTLEVKVATPKEEMRAPVKKVTRIFVARIPQSVTEATFRSHFEKYGEITDLY 122
Query: 439 MPKDQGSKGHRGIGFITFESADSVD 513
MPKDQGSK HRGIGFITF SADSV+
Sbjct: 123 MPKDQGSKMHRGIGFITFASADSVE 147
Score = 82.8 bits (203), Expect = 4e-14
Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 52/188 (27%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R + K+GE+ D+ + K++ + RG G+ TF SA+ +N ++
Sbjct: 93 RIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFASADSVENLMSE 152
Query: 265 EHYLGNRMLEVKVAIPK------------------------------------------- 315
H LG + V A PK
Sbjct: 153 THELGGSAVVVDRATPKDDDFKPIGRMPLPPPTQGGYGAYNAYISAATRYAALGAPTLYD 212
Query: 316 ---------EEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGH 468
+ R +SKK IFV R+P T + R YF +G I D+Y+P+D GH
Sbjct: 213 QPGPIYGRGDPSRRTSKK---IFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRTGH 269
Query: 469 RGIGFITF 492
RG GF+TF
Sbjct: 270 RGFGFVTF 277
>ref|XP_006590656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Glycine max] gi|571487434|ref|XP_006590657.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Glycine max]
gi|571487436|ref|XP_006590658.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X3 [Glycine max]
Length = 365
Score = 239 bits (611), Expect = 2e-61
Identities = 118/145 (81%), Positives = 127/145 (87%)
Frame = +1
Query: 79 ENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNAL 258
+ KLVVLGIPWDVDT+GLR+YMSKFGELED IVMKERSTGRSRGFGY TF S +DAK L
Sbjct: 3 QRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVL 62
Query: 259 ASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLY 438
+SEH +GNR LEVKVA PKEEMR KK TRIFVARIPQSVTE +FRS+FE YGEITDLY
Sbjct: 63 SSEHIIGNRTLEVKVATPKEEMRAPVKKVTRIFVARIPQSVTEATFRSHFEKYGEITDLY 122
Query: 439 MPKDQGSKGHRGIGFITFESADSVD 513
MPKDQGSK HRGIGFITF SADSV+
Sbjct: 123 MPKDQGSKMHRGIGFITFASADSVE 147
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1
Query: 319 EMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITFES 498
+ R +SKK IFV R+P T + R YF +G I D+Y+P+D GHRG GF+TF
Sbjct: 225 DARRTSKK---IFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRAGHRGFGFVTFAE 281
Query: 499 ADSVD 513
+ D
Sbjct: 282 DGAAD 286
>ref|XP_006466598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Citrus
sinensis]
Length = 358
Score = 239 bits (610), Expect = 3e-61
Identities = 117/146 (80%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWDVDTDGLR+YMSKFG+LED IVMKERSTGRSRGFGY TF SAEDAK A
Sbjct: 1 MEKKLVVLGIPWDVDTDGLREYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASAEDAKTA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L++EH+LG+RMLEVK+A PKEEMR +K +RIFVARI SV E FRS+FE YGEITDL
Sbjct: 61 LSAEHFLGSRMLEVKIATPKEEMRAPPRKVSRIFVARIAPSVNEAMFRSHFEKYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQGSK HRGIGFITF SADSV+
Sbjct: 121 YMPKDQGSKAHRGIGFITFASADSVE 146
Score = 88.6 bits (218), Expect = 8e-16
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 44/181 (24%)
Frame = +1
Query: 82 NKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALA 261
+++ V I V+ R + K+GE+ D+ + K++ + RG G+ TF SA+ +N +
Sbjct: 91 SRIFVARIAPSVNEAMFRSHFEKYGEITDLYMPKDQGSKAHRGIGFITFASADSVENLMV 150
Query: 262 SEHYLGNRMLEVKVAIPKEEM--------------------------------------- 324
H LG + V A PKE+
Sbjct: 151 DTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGS 210
Query: 325 -----RTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFIT 489
+S + +IFV R+PQ T E R YF +G I D+Y+PKD GHRG GF+T
Sbjct: 211 FYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 270
Query: 490 F 492
F
Sbjct: 271 F 271
>ref|XP_006425902.1| hypothetical protein CICLE_v10025943mg [Citrus clementina]
gi|567866563|ref|XP_006425904.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527892|gb|ESR39142.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527894|gb|ESR39144.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
Length = 358
Score = 239 bits (610), Expect = 3e-61
Identities = 117/146 (80%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWDVDTDGLR+YMSKFG+LED IVMKERSTGRSRGFGY TF SAEDAK A
Sbjct: 1 MEKKLVVLGIPWDVDTDGLREYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASAEDAKTA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L++EH+LG+RMLEVK+A PKEEMR +K +RIFVARI SV E FRS+FE YGEITDL
Sbjct: 61 LSAEHFLGSRMLEVKIATPKEEMRAPPRKVSRIFVARIAPSVNEAMFRSHFEKYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQGSK HRGIGFITF SADSV+
Sbjct: 121 YMPKDQGSKAHRGIGFITFASADSVE 146
Score = 88.6 bits (218), Expect = 8e-16
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 44/181 (24%)
Frame = +1
Query: 82 NKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALA 261
+++ V I V+ R + K+GE+ D+ + K++ + RG G+ TF SA+ +N +
Sbjct: 91 SRIFVARIAPSVNEAMFRSHFEKYGEITDLYMPKDQGSKAHRGIGFITFASADSVENLMV 150
Query: 262 SEHYLGNRMLEVKVAIPKEEM--------------------------------------- 324
H LG + V A PKE+
Sbjct: 151 DTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGS 210
Query: 325 -----RTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFIT 489
+S + +IFV R+PQ T E R YF +G I D+Y+PKD GHRG GF+T
Sbjct: 211 FYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 270
Query: 490 F 492
F
Sbjct: 271 F 271
>ref|XP_006425901.1| hypothetical protein CICLE_v10025943mg [Citrus clementina]
gi|567866561|ref|XP_006425903.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527891|gb|ESR39141.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
gi|557527893|gb|ESR39143.1| hypothetical protein
CICLE_v10025943mg [Citrus clementina]
Length = 260
Score = 239 bits (610), Expect = 3e-61
Identities = 117/146 (80%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWDVDTDGLR+YMSKFG+LED IVMKERSTGRSRGFGY TF SAEDAK A
Sbjct: 1 MEKKLVVLGIPWDVDTDGLREYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASAEDAKTA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L++EH+LG+RMLEVK+A PKEEMR +K +RIFVARI SV E FRS+FE YGEITDL
Sbjct: 61 LSAEHFLGSRMLEVKIATPKEEMRAPPRKVSRIFVARIAPSVNEAMFRSHFEKYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQGSK HRGIGFITF SADSV+
Sbjct: 121 YMPKDQGSKAHRGIGFITFASADSVE 146
>ref|XP_007156799.1| hypothetical protein PHAVU_002G018500g [Phaseolus vulgaris]
gi|561030214|gb|ESW28793.1| hypothetical protein
PHAVU_002G018500g [Phaseolus vulgaris]
Length = 357
Score = 239 bits (609), Expect = 4e-61
Identities = 117/146 (80%), Positives = 128/146 (87%)
Frame = +1
Query: 79 ENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNAL 258
+ KLVVLGIPWDVDT+GLR+YMSKFGELED IVMKERSTGRSRGFGY TF S +DAK+ L
Sbjct: 3 QRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKDVL 62
Query: 259 ASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLY 438
+ EH LGNR LEVKVA PKEEMR KK TRIFVARIPQSVTE +FRS+FE YG+ITDLY
Sbjct: 63 SGEHILGNRTLEVKVATPKEEMRAPVKKVTRIFVARIPQSVTEAAFRSHFEKYGDITDLY 122
Query: 439 MPKDQGSKGHRGIGFITFESADSVDT 516
MPKDQGSK HRGIGFITF SADSV++
Sbjct: 123 MPKDQGSKTHRGIGFITFASADSVES 148
Score = 83.2 bits (204), Expect = 3e-14
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 50/186 (26%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R + K+G++ D+ + K++ + RG G+ TF SA+ ++ ++
Sbjct: 93 RIFVARIPQSVTEAAFRSHFEKYGDITDLYMPKDQGSKTHRGIGFITFASADSVESLMSE 152
Query: 265 EHYLGNRMLEVKVAIPKEE----------------------------------------- 321
H LG + V A PK+E
Sbjct: 153 THELGGSAVVVDRATPKDEDFKPIGSSRMPPQGGYGAYNAYISAATRYAALGTPTLYDHP 212
Query: 322 ---------MRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRG 474
R +SKK IFV R+P + E R YF +G I D+Y+P+D GHRG
Sbjct: 213 GPIYGRGEPARRTSKK---IFVGRLPPEASSEDLRQYFGRFGRILDVYVPRDPKRTGHRG 269
Query: 475 IGFITF 492
GF+TF
Sbjct: 270 FGFVTF 275
>ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400
[Arabidopsis thaliana] gi|23308345|gb|AAN18142.1|
At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 239 bits (609), Expect = 4e-61
Identities = 116/146 (79%), Positives = 127/146 (86%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWD+D+DGL+ YMSKFG+LED IVMK+RSTGRSRGFGY TF SAEDAKNA
Sbjct: 1 MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L EH+LGNR+LEVKVA PKEEMR +KK TRIFVARIP SV+E FRS+FE YGEITDL
Sbjct: 61 LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKD SK HRGIGFITF SADSV+
Sbjct: 121 YMPKDYNSKQHRGIGFITFSSADSVE 146
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 196 GRSRGFG-YATFVSAEDAKNALASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIP 372
G G+G Y ++SA AL + N P T+ +IFV R+P
Sbjct: 194 GAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEP-----TTRGIGNKIFVGRLP 248
Query: 373 QSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
Q + + R YF +G I D Y+PKD GHRG GF+TF
Sbjct: 249 QEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTF 288
>ref|XP_006411923.1| hypothetical protein EUTSA_v10025462mg [Eutrema salsugineum]
gi|557113093|gb|ESQ53376.1| hypothetical protein
EUTSA_v10025462mg [Eutrema salsugineum]
Length = 379
Score = 238 bits (608), Expect = 5e-61
Identities = 116/146 (79%), Positives = 127/146 (86%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWD+D+DGL+ YMSKFG+LED IVMK+RSTGRSRGFGY TF SAEDAKNA
Sbjct: 1 MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L EH+LGNR+LEVKVA PKEEMR +KK TRIFVARIP SV+E FRS+FE YGEITDL
Sbjct: 61 LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPPSVSESDFRSHFERYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKD SK HRGIGFITF SADSV+
Sbjct: 121 YMPKDHNSKQHRGIGFITFASADSVE 146
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 349 RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
+IFV R+PQ + + R YF +G I D Y+PKD GHRG GF+TF
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTF 288
>ref|XP_004511926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cicer
arietinum]
Length = 359
Score = 238 bits (608), Expect = 5e-61
Identities = 116/145 (80%), Positives = 128/145 (88%)
Frame = +1
Query: 79 ENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNAL 258
+ KLVVLGIPWDVDTDGL++YMSK+GELED IVMKERSTGRSRGFGY TF S +DAK L
Sbjct: 3 QRKLVVLGIPWDVDTDGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASLDDAKEVL 62
Query: 259 ASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLY 438
+ EH LGNRMLEVKVA PKEEMR +KK TRIFVARIPQSVTE +FRS+FE YGEITDLY
Sbjct: 63 SGEHVLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPQSVTEATFRSHFEKYGEITDLY 122
Query: 439 MPKDQGSKGHRGIGFITFESADSVD 513
MPKDQGSK HRGIGFITF +A+SV+
Sbjct: 123 MPKDQGSKMHRGIGFITFANAESVE 147
Score = 84.7 bits (208), Expect = 1e-14
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 44/187 (23%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R + K+GE+ D+ + K++ + RG G+ TF +AE +N ++
Sbjct: 93 RIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFANAESVENLMSE 152
Query: 265 EHYLGNRMLEVKVAIPKEE-------------------MRTSSKKAT------------- 348
H LG + V A PK++ + T+++ A
Sbjct: 153 THELGGSAVVVDRATPKDDDVKPTGRISQGGYGAYNAYISTATRYAALGAPTLYDHPGPI 212
Query: 349 ------------RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
+IFV R+P + R YF +G I D+Y+P+D GHRG GF+TF
Sbjct: 213 YGRGEPRRRISKKIFVGRLPPEANSDDLRQYFGRFGHIEDVYIPRDPKRTGHRGFGFVTF 272
Query: 493 ESADSVD 513
D
Sbjct: 273 AEEGVAD 279
>gb|EYU44403.1| hypothetical protein MIMGU_mgv1a008369mg [Mimulus guttatus]
Length = 375
Score = 238 bits (607), Expect = 6e-61
Identities = 116/147 (78%), Positives = 130/147 (88%)
Frame = +1
Query: 73 LMENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKN 252
+ + KLVVLGIPWDV+T+GLR+YMSKFGELED IVMKERSTGRSRGFGY TF +AED K
Sbjct: 1 MSDRKLVVLGIPWDVETEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATAEDTKA 60
Query: 253 ALASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITD 432
ALASEH LGNRMLEVK+A PKEEMRTSSKK TRIFVARIP SVTE FRS+FE YG+ITD
Sbjct: 61 ALASEHMLGNRMLEVKIATPKEEMRTSSKKVTRIFVARIPPSVTEAVFRSHFEKYGDITD 120
Query: 433 LYMPKDQGSKGHRGIGFITFESADSVD 513
LYMPKD +KGHRGIGFITF ++++VD
Sbjct: 121 LYMPKDPTTKGHRGIGFITFANSEAVD 147
Score = 79.0 bits (193), Expect = 6e-13
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 51/194 (26%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP V R + K+G++ D+ + K+ +T RG G+ TF ++E + +
Sbjct: 93 RIFVARIPPSVTEAVFRSHFEKYGDITDLYMPKDPTTKGHRGIGFITFANSEAVDDLMVD 152
Query: 265 EHYLGNRMLEVKVAIPKE-EMRTSSKK------------------ATR------------ 351
H LG + V A PKE + R S+ ATR
Sbjct: 153 THELGGSTVVVDRATPKEEDFRPVSRAPPPSTAGGYGAYNAYISAATRYAALGAPPMFDH 212
Query: 352 --------------------IFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHR 471
IFV R+PQ + E R YF +G I D+Y+PKD GHR
Sbjct: 213 SGHAGPMHGRGEASRGMGKKIFVGRLPQEASVEDLRHYFGRFGRILDVYVPKDPKRTGHR 272
Query: 472 GIGFITFESADSVD 513
G GF+TF D
Sbjct: 273 GFGFVTFSDDGVAD 286
>ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297312803|gb|EFH43226.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 238 bits (607), Expect = 6e-61
Identities = 115/146 (78%), Positives = 127/146 (86%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
ME KLVVLGIPWD+D+DGL+ YMSKFG+LED IVMK+RSTGRSRGFGY TF S+EDAKNA
Sbjct: 1 MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSEDAKNA 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L EH+LGNR+LEVKVA PKEEMR +KK TRIFVARIP SV+E FRS+FE YGEITDL
Sbjct: 61 LKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKD SK HRGIGFITF SADSV+
Sbjct: 121 YMPKDHNSKQHRGIGFITFSSADSVE 146
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 196 GRSRGFG-YATFVSAEDAKNALASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIP 372
G G+G Y ++SA AL + N + P T+ +IFV R+P
Sbjct: 195 GAPGGYGAYDAYISAATRYAALGAPTLYDNPAMFYGRGEP-----TTRGIGNKIFVGRLP 249
Query: 373 QSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
Q + + R YF +G I D Y+PKD GHRG GF+TF
Sbjct: 250 QEASVDDLREYFGRFGRIQDAYIPKDPKRSGHRGFGFVTF 289
>ref|XP_007047269.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 4
[Theobroma cacao] gi|508699530|gb|EOX91426.1|
RNA-binding (RRM/RBD/RNP motifs) family protein isoform
4 [Theobroma cacao]
Length = 356
Score = 238 bits (606), Expect = 8e-61
Identities = 115/146 (78%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+ KLVVLGIPW+VDT+GLR+YMSKFG+LED IVMKERSTGRSRGFGY TF SA+DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNV 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L+ EH+LG RMLEVK+A PKEEMR +KK TRIFVARIP SV E +FRS+FE YGEITDL
Sbjct: 61 LSIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQ SK HRGIGFITF SADSV+
Sbjct: 121 YMPKDQASKAHRGIGFITFASADSVE 146
Score = 87.4 bits (215), Expect = 2e-15
Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 47/183 (25%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP VD R + ++GE+ D+ + K++++ RG G+ TF SA+ +N +
Sbjct: 92 RIFVARIPPSVDESTFRSHFEEYGEITDLYMPKDQASKAHRGIGFITFASADSVENLMTD 151
Query: 265 EHYLGNRMLEVKVAIPK------------------------------------------- 315
H LG + V A PK
Sbjct: 152 THELGGSTVVVDRATPKANDFKPIGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPV 211
Query: 316 ----EEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGF 483
E R KK IFV R+PQ E R YF +G I D+Y+PKD GHRG GF
Sbjct: 212 YGRGESTRGMGKK---IFVGRLPQEANAEDLRQYFGRFGRILDVYVPKDPKRSGHRGFGF 268
Query: 484 ITF 492
+TF
Sbjct: 269 VTF 271
>ref|XP_007047268.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 3
[Theobroma cacao] gi|508699529|gb|EOX91425.1|
RNA-binding (RRM/RBD/RNP motifs) family protein isoform
3 [Theobroma cacao]
Length = 357
Score = 238 bits (606), Expect = 8e-61
Identities = 115/146 (78%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+ KLVVLGIPW+VDT+GLR+YMSKFG+LED IVMKERSTGRSRGFGY TF SA+DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNV 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L+ EH+LG RMLEVK+A PKEEMR +KK TRIFVARIP SV E +FRS+FE YGEITDL
Sbjct: 61 LSIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQ SK HRGIGFITF SADSV+
Sbjct: 121 YMPKDQASKAHRGIGFITFASADSVE 146
Score = 89.4 bits (220), Expect = 5e-16
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 44/180 (24%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP VD R + ++GE+ D+ + K++++ RG G+ TF SA+ +N +
Sbjct: 92 RIFVARIPPSVDESTFRSHFEEYGEITDLYMPKDQASKAHRGIGFITFASADSVENLMTD 151
Query: 265 EHYLGNRMLEVKVAIPKEE-------------------MRTSSKKAT------------- 348
H LG + V A PKE+ + +++ A
Sbjct: 152 THELGGSTVVVDRATPKEDDFKPIGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPV 211
Query: 349 ------------RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
+IFV R+PQ E R YF +G I D+Y+PKD GHRG GF+TF
Sbjct: 212 YGRGESTRGMGKKIFVGRLPQEANAEDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 271
>ref|XP_007047267.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508699528|gb|EOX91424.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 356
Score = 238 bits (606), Expect = 8e-61
Identities = 115/146 (78%), Positives = 128/146 (87%)
Frame = +1
Query: 76 MENKLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNA 255
M+ KLVVLGIPW+VDT+GLR+YMSKFG+LED IVMKERSTGRSRGFGY TF SA+DAKN
Sbjct: 1 MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNV 60
Query: 256 LASEHYLGNRMLEVKVAIPKEEMRTSSKKATRIFVARIPQSVTEESFRSYFETYGEITDL 435
L+ EH+LG RMLEVK+A PKEEMR +KK TRIFVARIP SV E +FRS+FE YGEITDL
Sbjct: 61 LSIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDL 120
Query: 436 YMPKDQGSKGHRGIGFITFESADSVD 513
YMPKDQ SK HRGIGFITF SADSV+
Sbjct: 121 YMPKDQASKAHRGIGFITFASADSVE 146
Score = 89.4 bits (220), Expect = 5e-16
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 44/180 (24%)
Frame = +1
Query: 85 KLVVLGIPWDVDTDGLRQYMSKFGELEDVIVMKERSTGRSRGFGYATFVSAEDAKNALAS 264
++ V IP VD R + ++GE+ D+ + K++++ RG G+ TF SA+ +N +
Sbjct: 92 RIFVARIPPSVDESTFRSHFEEYGEITDLYMPKDQASKAHRGIGFITFASADSVENLMTD 151
Query: 265 EHYLGNRMLEVKVAIPKEE-------------------MRTSSKKAT------------- 348
H LG + V A PKE+ + +++ A
Sbjct: 152 THELGGSTVVVDRATPKEDDFKPIGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPV 211
Query: 349 ------------RIFVARIPQSVTEESFRSYFETYGEITDLYMPKDQGSKGHRGIGFITF 492
+IFV R+PQ E R YF +G I D+Y+PKD GHRG GF+TF
Sbjct: 212 YGRGESTRGMGKKIFVGRLPQEANAEDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 271