BLASTX nr result
ID: Akebia24_contig00027742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00027742
(376 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 85 1e-14
emb|CBI29360.3| unnamed protein product [Vitis vinifera] 85 1e-14
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera] 85 1e-14
ref|XP_001761821.1| predicted protein [Physcomitrella patens] gi... 81 2e-13
ref|XP_002307526.2| hypothetical protein POPTR_0005s22040g [Popu... 79 5e-13
gb|EXB37793.1| Polyadenylate-binding protein 3 [Morus notabilis] 79 6e-13
gb|AFX97758.1| poly(A)-binding protein, partial [Galium verum f.... 79 8e-13
ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [A... 78 1e-12
ref|XP_001770548.1| predicted protein [Physcomitrella patens] gi... 78 1e-12
gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] 78 1e-12
ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 78 1e-12
gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phy... 78 1e-12
ref|XP_006374904.1| hypothetical protein POPTR_0014s02550g [Popu... 77 2e-12
gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum] 77 2e-12
dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum] 77 2e-12
ref|XP_003589160.1| Polyadenylate-binding protein [Medicago trun... 77 2e-12
ref|XP_007160868.1| hypothetical protein PHAVU_001G023500g [Phas... 77 3e-12
ref|XP_007201196.1| hypothetical protein PRUPE_ppa002584mg [Prun... 77 3e-12
ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 8-l... 77 3e-12
ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 8-l... 77 3e-12
>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +3
Query: 12 ARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
A KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM+V++ S SG+D DQLGSL LN+
Sbjct: 1037 AGKVTGMLLEMDQTEVLHLIESPDALKNKVAEAMDVLRASSSGNDVGDQLGSLMLNE 1093
>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +3
Query: 12 ARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
A KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM+V++ S SG+D DQLGSL LN+
Sbjct: 577 AGKVTGMLLEMDQTEVLHLIESPDALKNKVAEAMDVLRASSSGNDVGDQLGSLMLNE 633
>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +3
Query: 12 ARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
A KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM+V++ S SG+D DQLGSL LN+
Sbjct: 576 AGKVTGMLLEMDQTEVLHLIESPDALKNKVAEAMDVLRASSSGNDVGDQLGSLXLNE 632
>ref|XP_001761821.1| predicted protein [Physcomitrella patens]
gi|162686876|gb|EDQ73262.1| predicted protein
[Physcomitrella patens]
Length = 153
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/61 (68%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDA-IDQLGSLSLN 179
HDFA KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM V++++ + A DQLG+LS++
Sbjct: 91 HDFAGKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRMAQAVPSAPTDQLGNLSIS 150
Query: 180 D 182
D
Sbjct: 151 D 151
>ref|XP_002307526.2| hypothetical protein POPTR_0005s22040g [Populus trichocarpa]
gi|550339506|gb|EEE94522.2| hypothetical protein
POPTR_0005s22040g [Populus trichocarpa]
Length = 649
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +3
Query: 6 DFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
D KVTGMLLEM+QTEVLHLIESPDAL+KKVAEAM V++ G+ S DQLGSL+LND
Sbjct: 592 DHVAKVTGMLLEMDQTEVLHLIESPDALKKKVAEAMQVLQEVGASSVG-DQLGSLALND 649
>gb|EXB37793.1| Polyadenylate-binding protein 3 [Morus notabilis]
Length = 646
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3
Query: 6 DFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
+++ KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM+V+ S SD DQLGSL+L +
Sbjct: 588 EYSGKVTGMLLEMDQTEVLHLIESPDALKDKVAEAMDVLHKVSSKSDVADQLGSLALGE 646
>gb|AFX97758.1| poly(A)-binding protein, partial [Galium verum f. pusillum]
Length = 65
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = +3
Query: 6 DFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
D A KVTGMLLEM+QTEVLHL+ESP+AL+ KVAEAM V++ GS+ DQL +LSLND
Sbjct: 3 DTAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMEVLRNVQQGSNPADQLAALSLND 61
>ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [Amborella trichopoda]
gi|548844219|gb|ERN03845.1| hypothetical protein
AMTR_s00078p00149860 [Amborella trichopoda]
Length = 645
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKL--SGSGSDAIDQLGSLSL 176
HD A KVTGMLLEM+QTEVLHLIESPDAL+ KV EA+ V+++ + + SD DQL SLSL
Sbjct: 584 HDHAGKVTGMLLEMDQTEVLHLIESPDALKTKVGEALEVLRMAQAAAPSDHTDQLASLSL 643
Query: 177 ND 182
N+
Sbjct: 644 NE 645
>ref|XP_001770548.1| predicted protein [Physcomitrella patens]
gi|162678256|gb|EDQ64717.1| predicted protein
[Physcomitrella patens]
Length = 645
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/61 (65%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGS-GSDAIDQLGSLSLN 179
HDFA KVTGMLLEM+QTEVLHLIESP+AL+ KVAEAM+V++++ + S DQLG+L++
Sbjct: 583 HDFAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVLRMAQAVPSPPTDQLGNLAIG 642
Query: 180 D 182
D
Sbjct: 643 D 643
>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
HD A KVTGMLLEM+QTEVLHL+ESPDAL+ KVAEAM+V++ + S + DQLG LSLN+
Sbjct: 596 HDHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMDVLR-NVSQPNVADQLGGLSLNE 654
>ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Fragaria vesca subsp. vesca]
Length = 635
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = +3
Query: 6 DFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLN 179
+ KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM+V++ + S +D DQLG+L LN
Sbjct: 578 ELTAKVTGMLLEMDQTEVLHLIESPDALKDKVAEAMDVLRNATSKTDVADQLGALDLN 635
>gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis]
Length = 472
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKL----SGSGSDAIDQLGSL 170
HD A KVTGMLLEM+QTEVLHLIESP+AL+ KVAEAM+V+++ +G+ ++ ID SL
Sbjct: 405 HDHAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVLQMAQANAGASTNGIDHFASL 464
Query: 171 SLND 182
SLN+
Sbjct: 465 SLNE 468
>ref|XP_006374904.1| hypothetical protein POPTR_0014s02550g [Populus trichocarpa]
gi|550323213|gb|ERP52701.1| hypothetical protein
POPTR_0014s02550g [Populus trichocarpa]
Length = 651
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSG---SDAIDQLGSLS 173
HD A KVTGMLLEM+QTEVLHL+ESP+AL+ KVAEAM V++ + ++ DQLGSLS
Sbjct: 585 HDSAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTVAAQQQINNQADQLGSLS 644
Query: 174 LND 182
LND
Sbjct: 645 LND 647
>gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
H+ A KVTGMLLEM+QTEVLHL+ESP+AL+ KVAEAM V++ ++ DQL SLSLND
Sbjct: 416 HEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVQQTTNPADQLASLSLND 475
>dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
H+ A KVTGMLLEM+QTEVLHL+ESP+AL+ KVAEAM V++ ++ DQL SLSLND
Sbjct: 594 HEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVQQTTNPADQLASLSLND 653
>ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding
protein [Medicago truncatula]
Length = 647
Score = 77.0 bits (188), Expect = 2e-12
Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIK--LSGSGSDAIDQLGSLSL 176
HD A KVTGMLLEM+Q EVLHLIESPDAL+ KVAEAM V++ G+ DQL SLSL
Sbjct: 585 HDSAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMEVLRNVSQQQGNSPADQLASLSL 644
Query: 177 ND 182
ND
Sbjct: 645 ND 646
>ref|XP_007160868.1| hypothetical protein PHAVU_001G023500g [Phaseolus vulgaris]
gi|561034332|gb|ESW32862.1| hypothetical protein
PHAVU_001G023500g [Phaseolus vulgaris]
Length = 651
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIK-LSGSGSDAIDQLGSLSLN 179
HD A KVTGMLLEM+Q EVLHLIESPDAL+ KVAEAM+V++ ++ ++ DQL SLSLN
Sbjct: 587 HDAAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQTNPADQLASLSLN 646
Query: 180 D 182
D
Sbjct: 647 D 647
>ref|XP_007201196.1| hypothetical protein PRUPE_ppa002584mg [Prunus persica]
gi|462396596|gb|EMJ02395.1| hypothetical protein
PRUPE_ppa002584mg [Prunus persica]
Length = 655
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +3
Query: 18 KVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIKLSGSGSDAIDQLGSLSLND 182
KVTGMLLEM+QTEVLHLIESPDAL+ KVAEAM+V++ + + S+ DQL SL LN+
Sbjct: 601 KVTGMLLEMDQTEVLHLIESPDALKDKVAEAMDVLRKAATKSEVADQLNSLDLNE 655
>ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 8-like [Glycine max]
Length = 654
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIK-LSGSGSDAIDQLGSLSLN 179
HD A KVTGMLLEM+Q EVLHLIESPDAL+ KVAEAM+V++ ++ ++ DQL SLSLN
Sbjct: 590 HDSAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQTNPADQLASLSLN 649
Query: 180 D 182
D
Sbjct: 650 D 650
>ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 8-like [Glycine max]
Length = 652
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 HDFARKVTGMLLEMNQTEVLHLIESPDALQKKVAEAMNVIK-LSGSGSDAIDQLGSLSLN 179
HD A KVTGMLLEM+Q EVLHLIESPDAL+ KVAEAM+V++ ++ ++ DQL SLSLN
Sbjct: 588 HDAAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQTNPADQLASLSLN 647
Query: 180 D 182
D
Sbjct: 648 D 648