BLASTX nr result

ID: Akebia24_contig00027741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00027741
         (321 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    62   2e-10
emb|CBI29360.3| unnamed protein product [Vitis vinifera]               62   2e-10
ref|XP_007201196.1| hypothetical protein PRUPE_ppa002584mg [Prun...    55   1e-08
ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [A...    64   2e-08
ref|XP_001770548.1| predicted protein [Physcomitrella patens] gi...    47   7e-08
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 3-l...    54   8e-07
gb|AEW08826.1| hypothetical protein CL1852Contig1_01, partial [P...    44   1e-06
ref|XP_006599461.1| PREDICTED: polyadenylate-binding protein 3-l...    50   1e-06
ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    46   8e-06
gb|AEW08827.1| hypothetical protein CL1852Contig1_01, partial [P...    44   9e-06

>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
            [Vitis vinifera]
          Length = 1093

 Score = 62.0 bits (149), Expect(2) = 2e-10
 Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
 Frame = +3

Query: 15   PGVQQMGMRRGGTPXXXXXXXXXXXX-----GFRYSLNERHGLEPSMAPQGLMGPVMPLP 179
            PG Q+MG+RRGG                    +RY  N R+G++PSM PQGLMGPVMPLP
Sbjct: 923  PG-QRMGVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLP 981

Query: 180  LDVSGVLV 203
             DVSG+ V
Sbjct: 982  FDVSGMPV 989



 Score = 28.5 bits (62), Expect(2) = 2e-10
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211  PLPITALAS------PEHQHRVLEEQLFPLI 285
            P+P++ LAS      P++Q  +L EQLFPL+
Sbjct: 999  PVPMSTLASALASTTPDNQRLMLGEQLFPLV 1029


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score = 62.0 bits (149), Expect(2) = 2e-10
 Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
 Frame = +3

Query: 15  PGVQQMGMRRGGTPXXXXXXXXXXXX-----GFRYSLNERHGLEPSMAPQGLMGPVMPLP 179
           PG Q+MG+RRGG                    +RY  N R+G++PSM PQGLMGPVMPLP
Sbjct: 463 PG-QRMGVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLP 521

Query: 180 LDVSGVLV 203
            DVSG+ V
Sbjct: 522 FDVSGMPV 529



 Score = 28.5 bits (62), Expect(2) = 2e-10
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211 PLPITALAS------PEHQHRVLEEQLFPLI 285
           P+P++ LAS      P++Q  +L EQLFPL+
Sbjct: 539 PVPMSTLASALASTTPDNQRLMLGEQLFPLV 569


>ref|XP_007201196.1| hypothetical protein PRUPE_ppa002584mg [Prunus persica]
           gi|462396596|gb|EMJ02395.1| hypothetical protein
           PRUPE_ppa002584mg [Prunus persica]
          Length = 655

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
 Frame = +3

Query: 24  QQMGMRRGGT-----PXXXXXXXXXXXXGFRYSLNERHGLEPSMAPQGLMGPVMPLPLDV 188
           Q+MG+RRGG                   G RY  N R+G++PS+ PQG++GP+MPLP D 
Sbjct: 487 QRMGVRRGGNFQQVQQQQQQLLHRNSNQGLRYMGNARNGVDPSVTPQGIVGPIMPLPFDG 546

Query: 189 SGVLV 203
           SG+ V
Sbjct: 547 SGMPV 551



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211 PLPITALAS------PEHQHRVLEEQLFPLI 285
           PLP++ LAS      PE+Q  +L EQL+PL+
Sbjct: 561 PLPMSTLASALASATPENQRLMLGEQLYPLV 591


>ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [Amborella trichopoda]
           gi|548844219|gb|ERN03845.1| hypothetical protein
           AMTR_s00078p00149860 [Amborella trichopoda]
          Length = 645

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 16/94 (17%)
 Frame = +3

Query: 15  PGVQQMGMRRGGTPXXXXXXXXXXXX-------GFRYSLNERHGLEPSMAPQGLMGPVMP 173
           PG Q+MG+RRGG P                   GFRY  N R+GL+P+M PQGLM P++P
Sbjct: 471 PG-QRMGVRRGGAPHQLQQQQQQQQMIQRNANQGFRYMNNARNGLDPTMVPQGLMSPMLP 529

Query: 174 LPLDVSGVLV---------VVPIANYSTCLSRAS 248
           LPLDV G+++          VPI   ++ L+ A+
Sbjct: 530 LPLDVPGMVMSPMEAPRPQPVPIGTLASALASAT 563


>ref|XP_001770548.1| predicted protein [Physcomitrella patens]
           gi|162678256|gb|EDQ64717.1| predicted protein
           [Physcomitrella patens]
          Length = 645

 Score = 47.4 bits (111), Expect(3) = 7e-08
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +3

Query: 24  QQMGMRRGGTPXXXXXXXXXXXXG----FRYSLNERHGLEPSMAPQGLMGPVMPLPLDVS 191
           Q+ G RRGG P            G    FRY+ N R+  + ++ PQG+MG ++P+P+++ 
Sbjct: 474 QRAGGRRGGAPQQQQPQQQMIQRGGNRNFRYTTNARNTPDVAVPPQGIMGAMLPVPIEIG 533

Query: 192 GVLVVVPIAN 221
           G    VP+AN
Sbjct: 534 G----VPVAN 539



 Score = 32.3 bits (72), Expect(3) = 7e-08
 Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211 PLPITALAS------PEHQHRVLEEQLFPLI 285
           PLPI+ALAS      PE Q  +L EQL+PL+
Sbjct: 548 PLPISALASALASAPPEQQRAMLGEQLYPLV 578



 Score = 21.6 bits (44), Expect(3) = 7e-08
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 284 LVERLQHDFARK 319
           LV++L+HDFA K
Sbjct: 577 LVDQLEHDFAGK 588


>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 3-like isoform 1 [Glycine
           max]
          Length = 652

 Score = 53.5 bits (127), Expect(2) = 8e-07
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +3

Query: 93  GFRYSLNERHGLEPSMAPQGLMGPVMPLPLDVSGV 197
           GFRY  N R+G++PS+ P GLMGP+MP+P D SGV
Sbjct: 513 GFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGV 547



 Score = 25.0 bits (53), Expect(2) = 8e-07
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 226 ALASPEHQHRVLEEQLFPLI 285
           A A+PE+Q  +L E L+PL+
Sbjct: 569 ASATPENQRMMLGEHLYPLV 588


>gb|AEW08826.1| hypothetical protein CL1852Contig1_01, partial [Pinus radiata]
           gi|383132430|gb|AFG47081.1| hypothetical protein
           CL1852Contig1_01, partial [Pinus taeda]
           gi|383132432|gb|AFG47082.1| hypothetical protein
           CL1852Contig1_01, partial [Pinus taeda]
           gi|383132434|gb|AFG47083.1| hypothetical protein
           CL1852Contig1_01, partial [Pinus taeda]
           gi|383132436|gb|AFG47084.1| hypothetical protein
           CL1852Contig1_01, partial [Pinus taeda]
          Length = 72

 Score = 44.3 bits (103), Expect(2) = 1e-06
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 111 NERHGLEPSMAPQGLMGPVMPLPLDVSGVLVVVPIANYST 230
           N R+G +PS+ PQ LMG +MP+PLDV+G    +P+ N  T
Sbjct: 2   NTRNGPDPSLVPQALMGTMMPMPLDVAG----MPVGNAET 37



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211 PLPITALAS------PEHQHRVLEEQLFPLI 285
           P+PITALAS      PE Q  +L EQLFPL+
Sbjct: 42  PVPITALASALASANPEQQRAMLGEQLFPLV 72


>ref|XP_006599461.1| PREDICTED: polyadenylate-binding protein 3-like [Glycine max]
          Length = 602

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +3

Query: 93  GFRYSLNERHGLEPSMAPQGLMGPVMPLPLDVSGVLVV 206
           GFRY  N R+G++PS+ P G+ GP+MPLP D SG+  V
Sbjct: 441 GFRYMENGRNGMDPSVIPHGMGGPMMPLPFDGSGISAV 478



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 226 ALASPEHQHRVLEEQLFPLI 285
           A A+PE+QH +L E L+PL+
Sbjct: 498 ASATPENQHLMLGEHLYPLV 517


>ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
           5-like [Fragaria vesca subsp. vesca]
          Length = 635

 Score = 46.2 bits (108), Expect(2) = 8e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
 Frame = +3

Query: 15  PGVQQMGMRRGGT----PXXXXXXXXXXXXGFRYSLNERHGLEPSMAPQGLMGPVMPLPL 182
           PG Q++G+RRGG                  G RY  + R+G++ +++PQGL+ PVMPLP 
Sbjct: 466 PG-QRIGVRRGGNFQQVQQQQQLMHRNSNQGSRYIGHARNGVDSAVSPQGLVSPVMPLPF 524

Query: 183 DVSGVLVV 206
           D SG+  V
Sbjct: 525 DGSGMPAV 532



 Score = 28.9 bits (63), Expect(2) = 8e-06
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211 PLPITALAS------PEHQHRVLEEQLFPLI 285
           P+P++ LAS      PE+Q  +L EQL+PL+
Sbjct: 542 PMPMSTLASALASATPENQRLMLGEQLYPLV 572


>gb|AEW08827.1| hypothetical protein CL1852Contig1_01, partial [Pinus lambertiana]
          Length = 72

 Score = 44.3 bits (103), Expect(2) = 9e-06
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 111 NERHGLEPSMAPQGLMGPVMPLPLDVSGVLVVVPIANYST 230
           N R+G +PS+ PQ LMG +MP+PLDV+G    +P+ N  T
Sbjct: 2   NTRNGPDPSLVPQALMGTMMPMPLDVAG----MPVGNAET 37



 Score = 30.8 bits (68), Expect(2) = 9e-06
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
 Frame = +1

Query: 211 PLPITALASP------EHQHRVLEEQLFPLI 285
           P+PITALAS       E Q  +L EQLFPL+
Sbjct: 42  PVPITALASALASANQEQQRAMLGEQLFPLV 72


Top