BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00027567
         (229 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...    89   5e-16
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...    87   2e-15
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...    87   2e-15
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...    85   9e-15
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...    85   9e-15
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]        84   2e-14
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...    84   3e-14
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...    82   6e-14
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]        82   8e-14
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...    82   8e-14
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...    81   1e-13
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...    81   2e-13
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       81   2e-13
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       81   2e-13
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...    80   3e-13
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...    80   4e-13
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]        79   5e-13
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...    79   7e-13
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    78   1e-12
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    76   4e-12

>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = -2

Query: 225 VSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQISS 46
           +SGFPS V+A+ VK FLE +TG GTVYA+K+R PK  R   R +A+VQFTS   AE I S
Sbjct: 7   ISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPK--RGGGRLYAIVQFTSATQAELIIS 64

Query: 45  LINQRLYYGTSYLK 4
           L NQRL+YG+SYLK
Sbjct: 65  LANQRLWYGSSYLK 78


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/75 (62%), Positives = 55/75 (73%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QVS FPS+V AE VK FLE YTG+ TVYALK+RQ K   +  R++A+VQFT    AE I 
Sbjct: 6   QVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQK---NGGRAYAIVQFTKSTDAELII 62

Query: 48  SLINQRLYYGTSYLK 4
            L NQRLYYG+SYLK
Sbjct: 63  RLTNQRLYYGSSYLK 77


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
           gi|482575337|gb|EOA39524.1| hypothetical protein
           CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/75 (58%), Positives = 53/75 (70%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP  V+ + VK+FLE  TG GTVYA+K+RQPK  R  PR FA+VQFTS   A  I 
Sbjct: 6   QVFGFPVGVNTDDVKIFLERLTGSGTVYAIKVRQPK--RGGPRVFAIVQFTSERHARLII 63

Query: 48  SLINQRLYYGTSYLK 4
           ++  +RLYYG SYLK
Sbjct: 64  TMAAERLYYGRSYLK 78


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/75 (58%), Positives = 52/75 (69%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP+ VSAE VK FLE  TG GTVYA+K+RQPK  +  PR +A+VQFTS      I 
Sbjct: 6   QVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVYAIVQFTSERHTRLII 63

Query: 48  SLINQRLYYGTSYLK 4
           +   +RLYYG SYLK
Sbjct: 64  TAAAERLYYGRSYLK 78


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/75 (58%), Positives = 52/75 (69%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP+ VSAE VK FLE  TG GTVYA+K+RQPK  +  PR +A+VQFTS      I 
Sbjct: 6   QVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVYAIVQFTSERHTRLII 63

Query: 48  SLINQRLYYGTSYLK 4
           +   +RLYYG SYLK
Sbjct: 64  TAAAERLYYGRSYLK 78


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 45/74 (60%), Positives = 55/74 (74%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           Q+SGFPS VSAE+VK FLE +TG GTVYA+K+R  K   S  RS+A+VQF + E+AE I 
Sbjct: 6   QLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGS--RSYAIVQFMTVETAELII 63

Query: 48  SLINQRLYYGTSYL 7
            L N RL+YG SYL
Sbjct: 64  RLANPRLWYGRSYL 77


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQ-I 52
           QV GFP+ VSAE VK FLE  TG GTVYA+K+RQPK  +  PR FA+VQFT+   A Q I
Sbjct: 6   QVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNERYARQII 63

Query: 51  SSLINQRLYYGTSYL 7
           +    +RLYYG SYL
Sbjct: 64  TGAAERRLYYGRSYL 78


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQ-I 52
           QV GFP+ VSAE VK FLE  TG GTVYA+K+RQPK  +  PR FA+VQFT+   A Q I
Sbjct: 6   QVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNEIYARQII 63

Query: 51  SSLINQRLYYGTSYL 7
           +    +RLYYG SYL
Sbjct: 64  TGAAERRLYYGRSYL 78


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 46/75 (61%), Positives = 53/75 (70%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP  +SAE VK FLEN+TG GTVYAL+++Q K  R   RSFA VQF S +SAE I 
Sbjct: 6   QVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGR---RSFARVQFASNKSAELII 62

Query: 48  SLINQRLYYGTSYLK 4
            L +  LYYG SYLK
Sbjct: 63  DLASMGLYYGPSYLK 77


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
           family protein [Populus trichocarpa]
          Length = 1133

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/74 (58%), Positives = 56/74 (75%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           +VSGFPSS +A  V+VFLE++TG GTV ALK+R+ +T     R +A+VQFT+  +AEQI 
Sbjct: 6   KVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRT--GGARKYAIVQFTTTRAAEQII 63

Query: 48  SLINQRLYYGTSYL 7
           SL N RL+YG SYL
Sbjct: 64  SLANPRLWYGHSYL 77


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQ-I 52
           QV GFP+ VSAE VK FLE  TG GTVYA+K+RQPK  +  PR FA+VQFT+   A Q I
Sbjct: 6   QVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNERYARQII 63

Query: 51  SSLINQRLYYGTSYL 7
           +    + LYYG SYL
Sbjct: 64  TGAAERSLYYGRSYL 78


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/75 (60%), Positives = 52/75 (69%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP  V+AE VK FLENYTGEGTV AL++   KT +   R++A VQFT+   AE I 
Sbjct: 6   QVFGFPYLVAAELVKKFLENYTGEGTVIALEV---KTAKVGRRAYARVQFTNIRCAETII 62

Query: 48  SLINQRLYYGTSYLK 4
            L   RLYYGTSYLK
Sbjct: 63  DLAKNRLYYGTSYLK 77


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/75 (61%), Positives = 50/75 (66%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GF S VSA  VK FLE YTG  TVYALK+RQ K    + R+FA+VQFT    A  I 
Sbjct: 6   QVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDAGLII 62

Query: 48  SLINQRLYYGTSYLK 4
            L NQRLYYG SYLK
Sbjct: 63  RLANQRLYYGRSYLK 77


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/75 (61%), Positives = 50/75 (66%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GF S VSA  VK FLE YTG  TVYALK+RQ K    + R+FA+VQFT    A  I 
Sbjct: 6   QVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDAGLII 62

Query: 48  SLINQRLYYGTSYLK 4
            L NQRLYYG SYLK
Sbjct: 63  RLANQRLYYGRSYLK 77


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 44/75 (58%), Positives = 54/75 (72%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP  +SAE VK FLEN+TG GTVYAL+++Q K  R   R+FA VQF + +SAE I 
Sbjct: 6   QVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGR---RAFAKVQFANNKSAEIII 62

Query: 48  SLINQRLYYGTSYLK 4
            L ++ LYYG SYLK
Sbjct: 63  DLASKGLYYGPSYLK 77


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 43/75 (57%), Positives = 54/75 (72%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP  +SAE VK FLEN+TG GTVYAL+++Q K  R   R+FA VQF + +SAE I 
Sbjct: 6   QVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGR---RAFAKVQFANNKSAELIM 62

Query: 48  SLINQRLYYGTSYLK 4
            L ++ LYYG SYL+
Sbjct: 63  DLASEGLYYGPSYLQ 77


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 44/75 (58%), Positives = 54/75 (72%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP  +SAE VK FLEN+TG GTVYAL+++Q K  R   R+FA VQF + +SAE I 
Sbjct: 6   QVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGR---RAFAKVQFANNKSAEFII 62

Query: 48  SLINQRLYYGTSYLK 4
            L ++ LYYG SYLK
Sbjct: 63  DLASKGLYYGPSYLK 77


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
           gi|557094740|gb|ESQ35322.1| hypothetical protein
           EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 41/75 (54%), Positives = 50/75 (66%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           +V GFP  VS E VK FLE  TG GTVYA+K+RQPK  +  PR +A+VQFT+   A  I 
Sbjct: 6   RVFGFPGGVSGEEVKNFLERETGSGTVYAIKVRQPK--KGGPRVYAIVQFTNERHARWII 63

Query: 48  SLINQRLYYGTSYLK 4
           +   + LYYG SYLK
Sbjct: 64  TRAEEGLYYGRSYLK 78


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca
           subsp. vesca]
          Length = 1119

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           Q+ GFPS  +AE +K FLE +TGEG+V+ALKLR  K   S  R +A++QF S   AE+I 
Sbjct: 6   QLHGFPSGQTAENIKEFLEKHTGEGSVFALKLRPAK---SGGRFYAIIQFQSISQAEKII 62

Query: 48  SLINQRLYYGTSYL 7
           SL N RL+YG SYL
Sbjct: 63  SLANARLWYGRSYL 76


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = -2

Query: 228 QVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQPKTTRSNPRSFAVVQFTSPESAEQIS 49
           QV GFP+ V+AE VK FLE+ TG GTVYALKLR PK  +   R +A+VQFT+ E+A+ I 
Sbjct: 6   QVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPK--KGVGRLYAIVQFTTKEAADTII 63

Query: 48  SLI--NQRLYYGTSYL 7
           SL    ++L+YG SYL
Sbjct: 64  SLACRTEKLWYGRSYL 79