BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00027232
         (947 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33284.3| unnamed protein product [Vitis vinifera]              340   5e-91
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   339   8e-91
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   338   2e-90
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   337   3e-90
emb|CBI36309.3| unnamed protein product [Vitis vinifera]              323   8e-86
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...   305   2e-80
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...   304   4e-80
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   303   5e-80
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   302   1e-79
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...   301   2e-79
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...   301   3e-79
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   301   3e-79
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   296   6e-78
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas...   295   2e-77
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                          288   2e-75
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun...   280   5e-73
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...   278   2e-72
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6...   276   9e-72
gb|AFK40562.1| unknown [Lotus japonicus]                              257   4e-66
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s...   253   8e-65

>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  340 bits (872), Expect = 5e-91
 Identities = 168/243 (69%), Positives = 201/243 (82%), Gaps = 7/243 (2%)
 Frame = +1

Query: 145 LEMGRVVENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 324
           L  G      ++LKRKRPDT T SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDN
Sbjct: 58  LSEGMSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 117

Query: 325 VVTKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLK 504
           VVTKSLK+LQVK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I  LK
Sbjct: 118 VVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILK 177

Query: 505 KQCLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGD 675
           K C++ ++KLK+AT E ISE+I K    + EC+TQQIAEILR LVLD+E++EVRS+ +G+
Sbjct: 178 KTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGE 237

Query: 676 FENIPLGTLCFRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKW 843
           F +IP+G +C+R +NK G+    P  G +ASIPCGVCP + +CTPDGIISPKTC YY+KW
Sbjct: 238 FSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 297

Query: 844 LDF 852
           LDF
Sbjct: 298 LDF 300


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  339 bits (870), Expect = 8e-91
 Identities = 166/233 (71%), Positives = 199/233 (85%), Gaps = 7/233 (3%)
 Frame = +1

Query: 175 AALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQ 354
           ++LKRKRPDT T SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLK+LQ
Sbjct: 7   SSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 66

Query: 355 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 534
           VK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I  LKK C++ ++KL
Sbjct: 67  VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKL 126

Query: 535 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 705
           K+AT E ISE+I K    + EC+TQQIAEILR LVLD+E++EVRS+ +G+F +IP+G +C
Sbjct: 127 KVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVC 186

Query: 706 FRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           +R +NK G+    P  G +ASIPCGVCP + +CTPDGIISPKTC YY+KWLDF
Sbjct: 187 YRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  338 bits (866), Expect = 2e-90
 Identities = 165/233 (70%), Positives = 199/233 (85%), Gaps = 7/233 (3%)
 Frame = +1

Query: 175 AALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQ 354
           ++LKRKRPDT T SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLK+LQ
Sbjct: 7   SSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 66

Query: 355 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 534
           VK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I  LK+ C++ ++KL
Sbjct: 67  VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKL 126

Query: 535 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 705
           K+AT E ISE+I K    + EC+TQQIAEILR LVLD+E++EVRS+ +G+F +IP+G +C
Sbjct: 127 KVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVC 186

Query: 706 FRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           +R +NK G+    P  G +ASIPCGVCP + +CTPDGIISPKTC YY+KWLDF
Sbjct: 187 YRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  337 bits (865), Expect = 3e-90
 Identities = 165/232 (71%), Positives = 198/232 (85%), Gaps = 7/232 (3%)
 Frame = +1

Query: 178 ALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQV 357
           +LKRKRPDT   SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLK+LQV
Sbjct: 8   SLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQV 67

Query: 358 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 537
           K LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I  LK+ C+K ++KLK
Sbjct: 68  KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLK 127

Query: 538 IATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 708
           +AT E ISE+I K    + EC+TQQIAEILR LVLD+E++EVRS+ +G+F +IP+G +C+
Sbjct: 128 VATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY 187

Query: 709 RRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           R +NK G+    PK G +ASIPCGVCP + +CTPDGIISPK+C YY+KWLDF
Sbjct: 188 RCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239


>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  323 bits (827), Expect = 8e-86
 Identities = 162/238 (68%), Positives = 196/238 (82%), Gaps = 7/238 (2%)
 Frame = +1

Query: 142 ILEMGRVVENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPD 321
           IL +G       +LKRKRPDT   SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPD
Sbjct: 86  ILILGMSRSQGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPD 145

Query: 322 NVVTKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTL 501
           NVVTKSLK+LQVK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I  L
Sbjct: 146 NVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKIL 205

Query: 502 KKQCLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETG 672
           K+ C+K ++KLK+AT E ISE+I K    + EC+TQQIAEILR LVLD+E++EVRS+ +G
Sbjct: 206 KETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSG 265

Query: 673 DFENIPLGTLCFRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYY 834
           +F +IP+G +C+R +NK G+    PK G +ASIPCGVCP + +CTPDGIISPK+ V+Y
Sbjct: 266 EFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
          Length = 233

 Score =  305 bits (781), Expect = 2e-80
 Identities = 149/231 (64%), Positives = 188/231 (81%), Gaps = 8/231 (3%)
 Frame = +1

Query: 184 KRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRE--TNLPDNVVTKSLKSLQV 357
           KRKRPD+   S +L+D ER++YD+IRSK+DMGIWTRDMKRE   NLPDN+VTKS+KSLQ 
Sbjct: 3   KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62

Query: 358 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 537
           K LIKEVVNI +KGKKH MAVEFEPSKE++GGAWY +G L+TEFI  +K QCLKQI KLK
Sbjct: 63  KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122

Query: 538 IATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 708
           +AT+E IS++I++   F V+ T QQI EI+R LVLD++++EV+S  +G+F NIP+G +C+
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182

Query: 709 RRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           +  +K    G PK+G LASIPCGVCP +  C PDG+ISPKTCVYY+KWLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score =  304 bits (778), Expect = 4e-80
 Identities = 142/236 (60%), Positives = 194/236 (82%), Gaps = 6/236 (2%)
 Frame = +1

Query: 163 VENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 342
           ++  ++LKRKRP+  + +Q+L++ ER+LYD+IRSK+D+GIWTRDMK+E  LPDNVV KSL
Sbjct: 4   LQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSL 63

Query: 343 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 522
           K+LQVK LIKEVVNI+NKG+KH+MA EFEPSKE++GGAWY++G L+TEFI +LK+ C +Q
Sbjct: 64  KALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQ 123

Query: 523 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 693
           I +  +AT+EE++++I     F+V+ T QQI EILRTL+LD+ ++EV+S   G+F +IP 
Sbjct: 124 IERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPF 183

Query: 694 GTLCFRRSNKMGV---PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           G +C++  +K+G+   PK+G LASIPCGVCP + +CTPDGIISPKTCVYY KWLDF
Sbjct: 184 GEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  303 bits (777), Expect = 5e-80
 Identities = 148/231 (64%), Positives = 188/231 (81%), Gaps = 8/231 (3%)
 Frame = +1

Query: 184 KRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRE--TNLPDNVVTKSLKSLQV 357
           KRKRP++   S +L+D ER++YD+IRSK+DMGIWTRDMKRE   NLPDN+VTKS+KSLQ 
Sbjct: 3   KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62

Query: 358 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 537
           K LIKEVVNI +KGKKH MAVEFEPSKE++GGAWY +G L+TEFI  +K QCLKQI KLK
Sbjct: 63  KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122

Query: 538 IATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 708
           +AT+E IS++I++   F V+ T QQI EI+R LVLD++++EV+S  +G+F NIP+G +C+
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182

Query: 709 RRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           +  +K    G PK+G LASIPCGVCP +  CTPDG+ISPKTCVYY+ WLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  302 bits (774), Expect = 1e-79
 Identities = 153/259 (59%), Positives = 197/259 (76%), Gaps = 9/259 (3%)
 Frame = +1

Query: 103 YSFIIYWIISLNYILEMGRVVENSAALKRKRPDTKTISQTLSDAERVLYDLIRS-KEDMG 279
           YSF   +++ L          + S   KRKRPD+   S +L+D ER++YD+IRS K+DMG
Sbjct: 3   YSFTDLYLLGL---------AKGSGMSKRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMG 53

Query: 280 IWTRDMKRE--TNLPDNVVTKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGG 453
           IWTRDMKRE   NLPDN+VTKS+KSLQ K LIKEVVNI NKGKKH MAVEFEPSKE++GG
Sbjct: 54  IWTRDMKRELKVNLPDNIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGG 113

Query: 454 AWYVDGKLNTEFITTLKKQCLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRT 624
           AWY +G L+TEFI  +K QCLKQI KLK+AT+E IS++I++   F V+ T QQI EI+R 
Sbjct: 114 AWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRA 173

Query: 625 LVLDDEVVEVRSTETGDFENIPLGTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECT 795
           +VLD++++EV+S  +G+F NIP+G +C++  +K    G PK+G  AS+PCGVCP +  CT
Sbjct: 174 VVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCT 233

Query: 796 PDGIISPKTCVYYSKWLDF 852
           PDG+ISPKTCVYY+KWLDF
Sbjct: 234 PDGVISPKTCVYYTKWLDF 252


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score =  301 bits (772), Expect = 2e-79
 Identities = 143/236 (60%), Positives = 190/236 (80%), Gaps = 6/236 (2%)
 Frame = +1

Query: 163 VENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 342
           V+  ++LKRKRP+  +  Q+L++ ER+LYD+IRSK+D+GIWTRDMK+E  LPDNVV KSL
Sbjct: 56  VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSL 115

Query: 343 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 522
           K+L+VK LIKEVVNI+NKG+KH+MA EFEPSKE++GGAWY++G L+TEFI +L++ C +Q
Sbjct: 116 KALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQ 175

Query: 523 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 693
           I K  +AT+EE++++I     F+V+ T QQI EILRTL+LD+ ++EV+S   G+F +IP 
Sbjct: 176 IEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPF 235

Query: 694 GTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           G +C+R  +K    G PK+G LASIPCGVCP +  CTPDGIISPKTCVYY KWLDF
Sbjct: 236 GKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWLDF 291


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score =  301 bits (770), Expect = 3e-79
 Identities = 148/232 (63%), Positives = 188/232 (81%), Gaps = 9/232 (3%)
 Frame = +1

Query: 184 KRKRPDTKTISQTLSDAERVLYDLIRS-KEDMGIWTRDMKRE--TNLPDNVVTKSLKSLQ 354
           KRKRPD+   S +L+D ER++YD+IRS K+DMGIWTRDMKRE   NLPDN+VTKS+KSLQ
Sbjct: 3   KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62

Query: 355 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 534
            K LIKEVVNI NKGKKH MAVEFEPSKE++GGAWY +G L+TEFI  +K QCLKQI KL
Sbjct: 63  NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122

Query: 535 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 705
           K+AT+E IS++I++   F V+ T QQI EI+R +VLD++++EV+S  +G+F NIP+G +C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182

Query: 706 FRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           ++  +K    G PK+G  AS+PCGVCP +  CTPDG+ISPKTCVYY+KWLDF
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  301 bits (770), Expect = 3e-79
 Identities = 149/236 (63%), Positives = 184/236 (77%), Gaps = 6/236 (2%)
 Frame = +1

Query: 163 VENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 342
           ++ S++LKRKR D   ++ +L+D ERVLY+LI SK+DMGIWT DMKRETNLPD++V KSL
Sbjct: 4   LQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63

Query: 343 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 522
           K LQ K LIKEVVNI+NKG+KHYMA EFEPSKE+TGG WY  G+L+T+FI  +K  CLK 
Sbjct: 64  KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKY 123

Query: 523 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 693
           I + K+AT + + E  RK   F+VE TTQQI EILRTLVLDDE+VEV+ST  GDF ++P+
Sbjct: 124 IFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPV 183

Query: 694 GTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           G +C+R  +K    G  K G +ASIPCGVCP +  CTPDGIISP+TCVYY KWLDF
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  296 bits (759), Expect = 6e-78
 Identities = 143/236 (60%), Positives = 188/236 (79%), Gaps = 6/236 (2%)
 Frame = +1

Query: 163 VENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 342
           +  S ALKRK+P++ + +Q+L++ E  LY++I SK+DMGIWTRDMKRETNLPDNVV KSL
Sbjct: 1   MNRSQALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSL 60

Query: 343 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 522
           K LQ K LIKEVVNI+NKG+KHYMA EFEPSKE+TGGAWYV+G L+TEFI  LK+ C KQ
Sbjct: 61  KVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQ 120

Query: 523 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 693
           + KLK+AT+E I+++I++   F+ E T QQI EI++ LVLD+ ++EV+S    +F  IP+
Sbjct: 121 VLKLKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPI 180

Query: 694 GTLCFR---RSNKMGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           G +C++   + +  G P+ G +ASIPCGVCP + +CTPDGIISP+TCVYYSKWLDF
Sbjct: 181 GKVCYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236


>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
           gi|561012478|gb|ESW11339.1| hypothetical protein
           PHAVU_008G021700g [Phaseolus vulgaris]
          Length = 239

 Score =  295 bits (754), Expect = 2e-77
 Identities = 146/236 (61%), Positives = 181/236 (76%), Gaps = 6/236 (2%)
 Frame = +1

Query: 163 VENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 342
           ++ S++LKRKR D   +S +++D ERVLY+LI SK+DMGIWT DMKRETNLPD++V KSL
Sbjct: 4   LQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63

Query: 343 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 522
           K LQ K LIKEVVNI+NKG+KHYMA EFEPSKE+TGG WY  G L+T+FI  +K+ CLK 
Sbjct: 64  KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKC 123

Query: 523 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 693
           I + K+AT + + E  RK   F+VE T QQI EILR LVLDDE+ EV+ST  GDF ++P+
Sbjct: 124 IFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPV 183

Query: 694 GTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           G +C+R  +K    G  K G +ASIPCGVCP +  CTPDGIISP+TCVYY KWLDF
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239


>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score =  288 bits (737), Expect = 2e-75
 Identities = 140/228 (61%), Positives = 178/228 (78%), Gaps = 5/228 (2%)
 Frame = +1

Query: 184 KRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQVKG 363
           KRK+P++ + +Q+L++ E+ LY+ IRSK+DMGIWTRDMKRETNLPD VV KSLK LQ K 
Sbjct: 8   KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67

Query: 364 LIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLKIA 543
           LIKEVVNI+NKG+K+YMA EFEPSKE+TGG WYV+G L+T FI  LK QC KQI KLK+A
Sbjct: 68  LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127

Query: 544 TVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCFRR 714
           TVE +++ I +    +V  T QQI EIL+ LVLD++V EV+S   G+F +IP+G +C++ 
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187

Query: 715 SNK--MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
             K   G PK G +ASIPCGVCP +  CTP+GIISP+TCVYY KWL+F
Sbjct: 188 IGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235


>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
           gi|462404542|gb|EMJ10006.1| hypothetical protein
           PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score =  280 bits (717), Expect = 5e-73
 Identities = 135/232 (58%), Positives = 181/232 (78%), Gaps = 6/232 (2%)
 Frame = +1

Query: 175 AALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQ 354
           +ALKRK+PD+ + S++L++ E+++Y +IRSK+DMGIWTRDMK+E NLPDN+V KS+KSLQ
Sbjct: 5   SALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQ 64

Query: 355 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 534
            K LIKEVVN+++KG+KHYMA EFEPSKELTGG WY +G L+  +I+ +K    K I +L
Sbjct: 65  AKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQL 124

Query: 535 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 705
           K+AT+E IS+ ++K   F    T QQI EILR LVLD  V EV+ST  G+F + P+G +C
Sbjct: 125 KVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVC 184

Query: 706 FRRSNKMG---VPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           ++ ++K G    PK G +ASIPCGVCP + +CTPDGIISP+TCVY++KWLDF
Sbjct: 185 YKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score =  278 bits (712), Expect = 2e-72
 Identities = 137/239 (57%), Positives = 186/239 (77%), Gaps = 5/239 (2%)
 Frame = +1

Query: 151 MGRVVENSAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 330
           M R+ E S+ LKRK+PD+++   +L++ ER++Y++IRSK+DMGIW +DMKR   +PDNV 
Sbjct: 1   MSRLQEPSS-LKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVA 59

Query: 331 TKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQ 510
            K+LKSL+ K LIKEVVNI+ +GKKHY+A EFEP+ E+TGGAWY +GK++   I  LK Q
Sbjct: 60  NKALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQ 119

Query: 511 CLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFE 681
           CLK I K ++AT+E I +AIRK    +VE TT QI E++R LVLD+EVVEV+S   G+F+
Sbjct: 120 CLKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFD 179

Query: 682 NIPLGTLCFRRSNK--MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           +IP+G +C++ ++K   G PK G ++SIPCGVCP + +CTPDGIISPKTC YYS+WLDF
Sbjct: 180 SIPVGKVCYKSTSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLDF 238


>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|590615245|ref|XP_007023169.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  276 bits (706), Expect = 9e-72
 Identities = 135/231 (58%), Positives = 181/231 (78%), Gaps = 6/231 (2%)
 Frame = +1

Query: 178 ALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQV 357
           ALKRKRP     S +L++ ER+++D+I+ K+DMGI  RDMKRE NLPDN+VTK LKSL  
Sbjct: 9   ALKRKRPGAT--SDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTKCLKSLLA 66

Query: 358 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 537
           K LIKEV NI+N+G+KH+++ EFEPS E+TGGAWYV+G L+TE+I  LK+QC ++I  LK
Sbjct: 67  KNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLK 126

Query: 538 IATVEEISEAIRKFSV---ECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 708
           +AT+E +++AI++ +V   E + QQI EI++ LVLD+EV+EV+S+ TG+F +IP+G +C+
Sbjct: 127 VATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCY 186

Query: 709 RRSNKMGV---PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLDF 852
           +   K G    PK G +ASIPCGVCP +  CTPDGIISPKTCVYY KWLDF
Sbjct: 187 KCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLDF 237


>gb|AFK40562.1| unknown [Lotus japonicus]
          Length = 232

 Score =  257 bits (657), Expect = 4e-66
 Identities = 130/233 (55%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
 Frame = +1

Query: 172 SAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSL 351
           S++LKRKRPD       L+D E V+Y LI SKE+MGIW  D+KRET +PDN+V K +KSL
Sbjct: 7   SSSLKRKRPD-------LTDGEDVVYKLIHSKENMGIWIADIKRETKMPDNMVKKCIKSL 59

Query: 352 QVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINK 531
           Q K L+KEVVNI+++GKK YMAV+FEPSKELTGG WY DGK +T+FI   K   LK + K
Sbjct: 60  QDKNLVKEVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVFLKYVFK 119

Query: 532 LKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTL 702
            K+AT + + E  RK   FSV+ T QQ+ EILR LVLDDE++EV ST   +F ++P G +
Sbjct: 120 QKVATCDGVLEWTRKNAVFSVDVTAQQVEEILRALVLDDEIIEVESTGKEEFASVPKGKI 179

Query: 703 CFR-RSNKMGVPKSGGLASIPCGVCPWLYECTP--DGIISPKTCVYYSKWLDF 852
           C++ +    G  K+G +ASIPCGVCP + +C P  DG ISP+TC Y+ KWLDF
Sbjct: 180 CYKSKGGVRGEKKAGAMASIPCGVCPRIIKCAPDADGFISPRTCDYFEKWLDF 232


>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Solanum lycopersicum]
           gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Solanum
           lycopersicum]
          Length = 237

 Score =  253 bits (646), Expect = 8e-65
 Identities = 127/232 (54%), Positives = 177/232 (76%), Gaps = 6/232 (2%)
 Frame = +1

Query: 172 SAALKRKRPDTKTISQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSL 351
           +AALKRKRPD+ T  Q L DAE V+ ++++SK++ G+W  D+K+E N+   +V K L SL
Sbjct: 7   AAALKRKRPDSST--QGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDKCLTSL 64

Query: 352 QVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINK 531
             K LIK+V +I+NK KK+YMAVE+EPS+ELTGGAWY +GKL+ EFIT L++ CLK I  
Sbjct: 65  VKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCLKVIGM 124

Query: 532 LKIATVEEISEAIRKFSVE--CTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 705
           +K+ATVE I + ++K  V   CT+QQ+ EIL ++VLDD ++EV+ST  G++ +IP+G++C
Sbjct: 125 MKVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSIPIGSVC 184

Query: 706 FRRSNKMGV---PKS-GGLASIPCGVCPWLYECTPDGIISPKTCVYYSKWLD 849
           +R +  +GV   PK+ G +ASIPCG CP +  CTPDGIISPKTCVY++KWLD
Sbjct: 185 YRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLD 234