BLASTX nr result
ID: Akebia24_contig00027139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00027139
(658 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 236 5e-68
emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera] 213 1e-64
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 221 2e-64
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc... 226 2e-64
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 218 1e-63
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 220 4e-63
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 220 4e-63
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 219 6e-63
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 219 8e-63
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 219 8e-63
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 213 2e-61
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 206 7e-61
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 213 1e-60
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 216 1e-60
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762... 207 1e-60
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 204 3e-60
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 206 4e-60
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 206 4e-60
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 209 4e-60
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 216 6e-60
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 236 bits (603), Expect(2) = 5e-68
Identities = 108/179 (60%), Positives = 131/179 (73%)
Frame = +2
Query: 122 SLKVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVE 301
+ +VFL FKS VE KI+ +Q DWGGE+RSF L S GI HR+SCPY H QNG E
Sbjct: 607 AFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAE 666
Query: 302 RKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYL 481
RKHRH+VE G+ALLA +SLP+ YW +AF T+V+LINRLP+P L NKSP E+LFH KP Y
Sbjct: 667 RKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYS 726
Query: 482 FLKTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
LK FGC C+PNLRP+N +K+ F S+PC FLGYS +H GY C P + ISRDV+FD
Sbjct: 727 XLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLS-PNGNILISRDVIFD 784
Score = 48.1 bits (113), Expect(2) = 5e-68
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1
Query: 7 DVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSD 120
D+WGPA S G ++Y +D YSRFTWI+ LK KS+
Sbjct: 569 DLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSE 606
>emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]
Length = 467
Score = 213 bits (543), Expect(2) = 1e-64
Identities = 92/177 (51%), Positives = 127/177 (71%)
Frame = +2
Query: 128 KVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERK 307
+ F+ F++ VE F+TKI+ +Q DW GE+RS LQ+ GISHR++CPY H Q ++ER+
Sbjct: 196 QTFIHFQAIVERQFDTKIKALQSDWDGEYRSITKHLQNQGISHRITCPYTHQQASAIERR 255
Query: 308 HRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFL 487
H +VE GLALLAH +LP +W D FLTAVF+INRL +P L ++SP+E++ H+K DY FL
Sbjct: 256 HXQIVEVGLALLAHYNLPKIFWEDVFLTAVFIINRLXTPILQHRSPYEMVHHHKXDYNFL 315
Query: 488 KTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWP LRPYN++KM F S C+F+ YS H GY C V T ++++S V+F+
Sbjct: 316 XAFGCACWPYLRPYNRHKMDFXSKTCIFIRYSVGHRGYKCLDVSTXKIFVSXHVVFB 372
Score = 60.1 bits (144), Expect(2) = 1e-64
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVKSLFILQ 147
+ D+WGPAP+LS G R+Y S +DD ++F WIFPLK KS+ ++ Q
Sbjct: 154 YSDIWGPAPVLSTSGARYYISFLDDATKFLWIFPLKLKSNACQTFIHFQ 202
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 221 bits (562), Expect(2) = 2e-64
Identities = 98/175 (56%), Positives = 121/175 (69%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F+ VE FN KI +Q DWGGE++ N GI+H +SCP+ H QNGS ERKHR
Sbjct: 391 FQEFQCLVERMFNRKIISMQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHR 450
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GL+LLAH+SLP +W +A+ + V+LINR+P+ L SP E LF PDY L+T
Sbjct: 451 HIVEVGLSLLAHASLPLKFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRT 510
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWP+LRPYN +KMHF S C FLGYSP H G+ C T R+YISRDV+FD
Sbjct: 511 FGCACWPDLRPYNSHKMHFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFD 565
Score = 52.0 bits (123), Expect(2) = 2e-64
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +1
Query: 7 DVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
DVWGPAP+ GG ++Y S +D +SRFTWI+ LK KS+V
Sbjct: 350 DVWGPAPVAG-GGKKYYVSFIDAFSRFTWIYFLKYKSEV 387
>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1001
Score = 226 bits (575), Expect(2) = 2e-64
Identities = 101/177 (57%), Positives = 126/177 (71%)
Frame = +2
Query: 125 LKVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVER 304
L+ F F S VE + KI +Q DWGGE+ N+ GISHR+SCP+AH QNG+ ER
Sbjct: 298 LQKFQEFLSFVERLLDRKIIAMQTDWGGEYEKLNSFFTKIGISHRVSCPHAHQQNGAAER 357
Query: 305 KHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLF 484
KHRH+VE GLALLAH+S+P +W +AF TA +LINR P+ T++ +P E LFH KP+Y
Sbjct: 358 KHRHIVEVGLALLAHASMPLKFWDEAFCTATYLINRTPAKTINFDTPLERLFHQKPEYAS 417
Query: 485 LKTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLF 655
L+TFGC CWPNLRPYN K+ F S CVFLGYS + G+ C HV T R+YISRDV+F
Sbjct: 418 LRTFGCACWPNLRPYNSKKLVFRSTQCVFLGYSRLYKGFKCLHVSTGRIYISRDVIF 474
Score = 47.0 bits (110), Expect(2) = 2e-64
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVK 129
+ DVWGPA S G +Y S +DD+S+FTWI+ LK KS+V++
Sbjct: 258 YSDVWGPATD-SVGRKNYYVSFIDDFSKFTWIYFLKYKSEVLQ 299
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 218 bits (555), Expect(2) = 1e-63
Identities = 93/175 (53%), Positives = 126/175 (72%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F++ VE F+ KI +Q DWGGE++ N+ GI H +SCP+ H QNGS ERKHR
Sbjct: 562 FKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHR 621
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H++E GL+LL+++S+P +W +AF+ A +LINR+PS T+ N +P E LF+ KPDYL L+
Sbjct: 622 HIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRV 681
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWP+LRPYN +K+ F S CVFLG+S H G+ C V + R+YISRDV+FD
Sbjct: 682 FGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFD 736
Score = 52.0 bits (123), Expect(2) = 1e-63
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
F DVWGPAP S G ++Y S +DD+S+FTWI+ LK KS+V
Sbjct: 519 FSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEV 558
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 220 bits (560), Expect(2) = 4e-63
Identities = 98/175 (56%), Positives = 123/175 (70%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F+ VE F+ KI +Q DWGGE++S N+ GI H +SCP+ H QNGS ERKHR
Sbjct: 556 FQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHR 615
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GL+LL+H+S+P +W +AF A +LINR+PS +HN SP E LF KPDY L+
Sbjct: 616 HIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRI 675
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWPNLRPYN +K+ F S CVFLG+S H G+ C V T R+YISRDV+FD
Sbjct: 676 FGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFD 730
Score = 48.5 bits (114), Expect(2) = 4e-63
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
F DVWGPAP S G ++Y S +DD+S+FTWI+ ++ KS V
Sbjct: 513 FSDVWGPAPE-SVGRKKYYVSFIDDFSKFTWIYLIQHKSQV 552
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 220 bits (560), Expect(2) = 4e-63
Identities = 106/179 (59%), Positives = 126/179 (70%)
Frame = +2
Query: 122 SLKVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVE 301
+L +F FK VE F+ KI+ +Q D GGEFRSF + LQ GI HR SCPY SQNG VE
Sbjct: 535 ALPIFKQFKLQVENQFDAKIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVE 594
Query: 302 RKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYL 481
RKHRHVVETGLALLAH+ LP +WS AF TA FLINR+PS L N SP+ LF PDY
Sbjct: 595 RKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYK 654
Query: 482 FLKTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FL+ FGC C+P +RPYN +K+ + SL CVFLGYS H GY+C T R+Y+S V+FD
Sbjct: 655 FLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFD 713
Score = 48.5 bits (114), Expect(2) = 4e-63
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVV 126
+ D+WGPA + S G +++ VDDYSR+TW++ L+ K +
Sbjct: 495 YTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQAL 536
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 219 bits (558), Expect(2) = 6e-63
Identities = 106/179 (59%), Positives = 125/179 (69%)
Frame = +2
Query: 122 SLKVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVE 301
+L +F FK VE F KI+ +Q D GGEFRSF + LQ GI HR SCPY SQNG VE
Sbjct: 585 ALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVE 644
Query: 302 RKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYL 481
RKHRHVVETGLALLAH+ LP +WS AF TA FLINR+PS L N SP+ LF PDY
Sbjct: 645 RKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYK 704
Query: 482 FLKTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FL+ FGC C+P +RPYN +K+ + SL CVFLGYS H GY+C T R+Y+S V+FD
Sbjct: 705 FLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFD 763
Score = 48.5 bits (114), Expect(2) = 6e-63
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVV 126
+ D+WGPA + S G +++ VDDYSR+TW++ L+ K +
Sbjct: 545 YTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQAL 586
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 219 bits (558), Expect(2) = 8e-63
Identities = 97/175 (55%), Positives = 125/175 (71%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F+S VE FN KI +Q DWGGE++ N+ + GI+H++SCP+ H QNG+VERKHR
Sbjct: 550 FKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHR 609
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GL+LLAH+S+P +W +AFL A +LINRLP + +P LFH +PDY L+T
Sbjct: 610 HIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRT 669
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWPNLRPYN +K+ F S CVFLG+S H G+ C V T ++YISRDV FD
Sbjct: 670 FGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRDVTFD 724
Score = 48.1 bits (113), Expect(2) = 8e-63
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 7 DVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
DVWGPA S G R+Y S +DDYS+F WI+ LK KS+V
Sbjct: 509 DVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFLKFKSEV 546
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 219 bits (558), Expect(2) = 8e-63
Identities = 97/175 (55%), Positives = 125/175 (71%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F+S VE FN KI +Q DWGGE++ N+ + GI+H++SCP+ H QNG+VERKHR
Sbjct: 439 FKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHR 498
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GL+LLAH+S+P +W +AFL A +LINRLP + +P LFH +PDY L+T
Sbjct: 499 HIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRT 558
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWPNLRPYN +K+ F S CVFLG+S H G+ C V T ++YISRDV FD
Sbjct: 559 FGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRDVTFD 613
Score = 48.1 bits (113), Expect(2) = 8e-63
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 7 DVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
DVWGPA S G R+Y S +DDYS+F WI+ LK KS+V
Sbjct: 398 DVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFLKFKSEV 435
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 213 bits (543), Expect(2) = 2e-61
Identities = 96/175 (54%), Positives = 120/175 (68%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F+ VE F+ KI +Q DWGGE+ + GISH +SCP+ H QNG+VERKHR
Sbjct: 549 FHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHR 608
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GL+LLAH+S+P +W +AFL A +LINRLPS + +P E LF PDY L+T
Sbjct: 609 HIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRT 668
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWPNLRPYN +K+ F S CVFLG+S H G+ C V T R+Y+SRDV FD
Sbjct: 669 FGCACWPNLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFD 723
Score = 49.3 bits (116), Expect(2) = 2e-61
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 7 DVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVKSLFILQK 150
DVWGPA S G ++Y S +DDYS+F WI+ LK KS+V + QK
Sbjct: 508 DVWGPASE-SVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQK 554
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 206 bits (525), Expect(2) = 7e-61
Identities = 93/175 (53%), Positives = 117/175 (66%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F++ VE KI +Q DWGGE++ ++ GISH +SCPYAH QN S ERKHR
Sbjct: 525 FHEFQALVERLLGHKIITMQKDWGGEYQKLHSFFDKIGISHHVSCPYAHQQNSSAERKHR 584
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GLALLAH+S+P W + F TA +LINR P+ + ++P E LF P+Y L+
Sbjct: 585 HIVEVGLALLAHASMPLKLWDEVFYTAAYLINRTPNKVIKFETPLERLFKQLPNYSLLRV 644
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWPNLRPYN +K+ F S CVFL YS H G+ C V T R+YISRDV+FD
Sbjct: 645 FGCACWPNLRPYNNHKLQFRSKQCVFLDYSHLHKGFKCLDVSTGRVYISRDVIFD 699
Score = 54.3 bits (129), Expect(2) = 7e-61
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVKSLFILQ 147
+ DVWG AP S GG +FY S +DD+S+FTW++ LK KSDV + Q
Sbjct: 482 YSDVWGTAPS-SVGGNKFYVSFIDDFSKFTWVYSLKHKSDVFQKFHEFQ 529
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 213 bits (542), Expect(2) = 1e-60
Identities = 101/177 (57%), Positives = 119/177 (67%)
Frame = +2
Query: 128 KVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERK 307
+ FL FK+ E F K+ Q DWGGEFRS + GI HRLSCP+ QNG +ERK
Sbjct: 667 EAFLMFKAQAELQFGCKLXTFQXDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERK 726
Query: 308 HRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFL 487
HRH+VE GL LLA +SLP YW DAF T VFLINRLP+ L K P+E LF+ KP+Y L
Sbjct: 727 HRHIVELGLTLLAQASLPLKYWPDAFSTXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQL 786
Query: 488 KTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
K FGC C+P+LRPYNK+K+ F S PC FLGYS H GY C + RM+ISR V FD
Sbjct: 787 KVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLN-QQGRMFISRSVXFD 842
Score = 47.4 bits (111), Expect(2) = 1e-60
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 7 DVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVKSLFILQ 147
D+WGPAP+ S GF +Y S D YSR+T ++ LK KS ++ + +
Sbjct: 627 DLWGPAPINSSYGFTYYVSFXDAYSRYTXVYFLKTKSQTREAFLMFK 673
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 216 bits (550), Expect(2) = 1e-60
Identities = 92/175 (52%), Positives = 121/175 (69%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F+ +E F+ KI +Q DWGGE+R+ N+ GI H +SCP+ H QNGS ERKHR
Sbjct: 432 FQEFQVMIERLFDRKILAMQTDWGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHR 491
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H+VE GL+LL+H+ +P +W +AF A +LINR+PS + N +P E FH KPDY L+
Sbjct: 492 HIVEVGLSLLSHAHMPLKFWDEAFQAATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRV 551
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FGC CWPNLRPYNK+K+ F S C FLG+S H G+ C + + R+YISRDV+FD
Sbjct: 552 FGCACWPNLRPYNKHKLQFRSKRCAFLGFSNMHKGFKCLDISSGRVYISRDVVFD 606
Score = 43.9 bits (102), Expect(2) = 1e-60
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 13 WGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
WGPAP S G ++Y S +DD+S+FTWI+ L+ KS V
Sbjct: 393 WGPAPE-SVGRKKYYVSFIDDFSKFTWIYLLQHKSQV 428
>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
Length = 866
Score = 207 bits (527), Expect(2) = 1e-60
Identities = 93/177 (52%), Positives = 120/177 (67%)
Frame = +2
Query: 128 KVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERK 307
+VF F+ VE + KI IQ DWGGE+ N+ + GISHR+SCP+ H QNG+ ERK
Sbjct: 472 RVFQEFQQLVERKLSKKILCIQSDWGGEYEKLNSFFKKIGISHRVSCPHTHQQNGAAERK 531
Query: 308 HRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFL 487
HRH++E GLALLA++S+P +W AFLTA +LIN LPS ++ + P LF DY L
Sbjct: 532 HRHIIEVGLALLANASMPLKFWDQAFLTATYLINLLPSKVINFEIPATRLFGDTSDYSNL 591
Query: 488 KTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
+ FGC CWPNLRPYN +K+ F S C F+GYS H G+ C + T R+YISRDV+FD
Sbjct: 592 RVFGCACWPNLRPYNSHKLSFRSTQCAFIGYSSMHKGFKCLDISTGRIYISRDVVFD 648
Score = 52.8 bits (125), Expect(2) = 1e-60
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVK 129
+ DVWGPAP S G +Y S +DDYS++TWI+ LK KSDV +
Sbjct: 431 YSDVWGPAPT-SIGRSTYYVSFIDDYSKYTWIYLLKHKSDVFR 472
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 204 bits (519), Expect(2) = 3e-60
Identities = 95/179 (53%), Positives = 123/179 (68%)
Frame = +2
Query: 122 SLKVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVE 301
++K F++FK+ VE F+ KI+ +Q DWGGEFR+F + L GI HR+SCP+ QNG E
Sbjct: 624 AIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAE 683
Query: 302 RKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYL 481
RKHR +VE GL LL +SLP +W ++F T V+L NRLP+ LH+K P E+LF PDY
Sbjct: 684 RKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYS 743
Query: 482 FLKTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
FLK FGC C+PNLRPYN +K+ + S C FLGYS H GY C R+YIS DV+F+
Sbjct: 744 FLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMS-SNGRVYISHDVIFN 801
Score = 54.7 bits (130), Expect(2) = 3e-60
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +1
Query: 4 IDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVKS 132
+D+WGP +LS G+R+Y VD +SRF+WIF L+ KS+ +K+
Sbjct: 585 LDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKT 627
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 206 bits (525), Expect(2) = 4e-60
Identities = 88/175 (50%), Positives = 122/175 (69%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F++ VE F+ KI +Q DWGGE++ N+ GI H +SCP+ H QNGS ERKH+
Sbjct: 565 FKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHK 624
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H++E GL+LL+++S+P +W +AF+ A +LINR+PS T+ N +P E LF+ KPDY L+
Sbjct: 625 HIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRV 684
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
F C CWP+L PYN +K+ F S CVFLG+S H G+ V + R+YISRDV+FD
Sbjct: 685 FSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFD 739
Score = 52.0 bits (123), Expect(2) = 4e-60
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
F DVWGPAP S G ++Y S +DD+S+FTWI+ LK KS+V
Sbjct: 522 FSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEV 561
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 206 bits (525), Expect(2) = 4e-60
Identities = 88/175 (50%), Positives = 122/175 (69%)
Frame = +2
Query: 134 FLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERKHR 313
F F++ VE F+ KI +Q DWGGE++ N+ GI H +SCP+ H QNGS ERKH+
Sbjct: 565 FKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHK 624
Query: 314 HVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFLKT 493
H++E GL+LL+++S+P +W +AF+ A +LINR+PS T+ N +P E LF+ KPDY L+
Sbjct: 625 HIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRV 684
Query: 494 FGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
F C CWP+L PYN +K+ F S CVFLG+S H G+ V + R+YISRDV+FD
Sbjct: 685 FSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFD 739
Score = 52.0 bits (123), Expect(2) = 4e-60
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 123
F DVWGPAP S G ++Y S +DD+S+FTWI+ LK KS+V
Sbjct: 522 FSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEV 561
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 209 bits (531), Expect(2) = 4e-60
Identities = 98/179 (54%), Positives = 125/179 (69%)
Frame = +2
Query: 122 SLKVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVE 301
+L +F FK +E F+TKI+ +Q D GGEFRSF + LQ+ GI+HR SCPY QNG VE
Sbjct: 590 ALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVE 649
Query: 302 RKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYL 481
RKHRHVVETGLALL+H+SLP YW AF T FLINR+PS L SP+ LF PDY
Sbjct: 650 RKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYK 709
Query: 482 FLKTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
+ FGC C+P +RPYN +K+ + S+ C+FLGYS +H G++C T R+YI+ V+FD
Sbjct: 710 SFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFD 768
Score = 49.7 bits (117), Expect(2) = 4e-60
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 1 FIDVWGPAPLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVV 126
+ D+WGPA + S G R++ VDDYSR+TW + L+ K +
Sbjct: 550 YTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQAL 591
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 216 bits (551), Expect(2) = 6e-60
Identities = 102/177 (57%), Positives = 122/177 (68%)
Frame = +2
Query: 128 KVFLSFKSHVETFFNTKIRFIQFDWGGEFRSFNNVLQSFGISHRLSCPYAHSQNGSVERK 307
+ FL FK+ E F K++ Q DWGGEFRS + GI HRLSCP+ QNG +ERK
Sbjct: 421 EAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERK 480
Query: 308 HRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSPTLHNKSPFELLFHYKPDYLFL 487
HRH+VE GL LLA +SLP YW DAF TAVFLINRLP+ L K P+E LF+ KP+Y L
Sbjct: 481 HRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQL 540
Query: 488 KTFGCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVPTARMYISRDVLFD 658
K FGC C+P+LRPYNK+K+ F S PC FLGYS H GY C + RM+ISR V+FD
Sbjct: 541 KVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLN-QQGRMFISRSVVFD 596
Score = 41.2 bits (95), Expect(2) = 6e-60
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 22 APLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDVVKSLFILQ 147
AP+ S GF +Y S D YSR+TW++ LK KS ++ + +
Sbjct: 386 APINSSYGFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFK 427