BLASTX nr result
ID: Akebia24_contig00024969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00024969
(283 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phas... 79 6e-13
ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c... 75 1e-11
ref|XP_004492095.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_003621820.1| Pentatricopeptide repeat-containing protein,... 72 6e-11
ref|XP_007217805.1| hypothetical protein PRUPE_ppa026585mg [Prun... 72 1e-10
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp.... 72 1e-10
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th... 71 2e-10
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana] 71 2e-10
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr... 70 3e-10
ref|XP_002319950.1| hypothetical protein POPTR_0013s14820g [Popu... 70 4e-10
ref|XP_002522705.1| pentatricopeptide repeat-containing protein,... 69 7e-10
gb|EXC06936.1| hypothetical protein L484_007616 [Morus notabilis] 68 1e-09
ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Caps... 67 3e-09
gb|EPS72721.1| hypothetical protein M569_02036 [Genlisea aurea] 60 4e-07
ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [A... 59 9e-07
>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
protein product [Vitis vinifera]
Length = 742
Score = 88.6 bits (218), Expect = 8e-16
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +2
Query: 2 PATLLEILKHFXXXXXXXXXDCYEDPDHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVA 181
PATL + L + + D + FD DS FSSLLD S +KRHL QIHAQLV
Sbjct: 40 PATLFKFLNFYSSLPLPLD---HSDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVV 96
Query: 182 LGLQESNFLATKFVHVSSNLGEINYARKLFDE 277
GL ES FL TKFV+ S N+GEI YARK+FDE
Sbjct: 97 SGLVESGFLVTKFVNASWNIGEIGYARKVFDE 128
>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 80 DHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYA 259
+H + F+ DS ++SL+D ST+KRHL QIH +LV GLQ + FL TK V+ SSNLG+I YA
Sbjct: 48 NHDHCFNSDSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYA 107
Query: 260 RKLFDE 277
RKLFDE
Sbjct: 108 RKLFDE 113
>ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Fragaria vesca subsp. vesca]
Length = 739
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = +2
Query: 62 DCYEDPDHPNSF--DPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSS 235
D Y +H F D +S F+S +D ST + HLTQIHAQL+ LG Q S FL TK V+ SS
Sbjct: 52 DSYFSDNHTLHFGYDSESSFASFIDSSTRRTHLTQIHAQLLVLGFQASAFLITKLVNCSS 111
Query: 236 NLGEINYARKLFDE 277
NLG I+YAR++FDE
Sbjct: 112 NLGHISYARQVFDE 125
>ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phaseolus vulgaris]
gi|593331658|ref|XP_007139255.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
gi|561012387|gb|ESW11248.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
gi|561012388|gb|ESW11249.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
Length = 727
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +2
Query: 80 DHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYA 259
+H S + DS ++SL+D ST+KRHL QIH QLV GLQ + FL TK V+ SSNL +I YA
Sbjct: 48 NHDRSVNSDSFYASLIDNSTHKRHLDQIHNQLVVSGLQHNGFLMTKLVNGSSNLAQICYA 107
Query: 260 RKLFD 274
RKLFD
Sbjct: 108 RKLFD 112
>ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao]
gi|508712276|gb|EOY04173.1| Mitochondrial editing factor
22 [Theobroma cacao]
Length = 735
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/92 (43%), Positives = 58/92 (63%)
Frame = +2
Query: 2 PATLLEILKHFXXXXXXXXXDCYEDPDHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVA 181
PAT LK F +++ ++F+ DS +++LLD ST HLTQIHA+LV
Sbjct: 39 PATPFNFLKPF---------SSHDNSTIFHTFNFDSFYANLLDSSTRNAHLTQIHAKLVL 89
Query: 182 LGLQESNFLATKFVHVSSNLGEINYARKLFDE 277
L + ++ FL TK ++ + NLGEI+YARK+FDE
Sbjct: 90 LDIHQNGFLITKLINSAVNLGEISYARKVFDE 121
>ref|XP_004492095.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cicer arietinum]
Length = 724
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +2
Query: 80 DHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYA 259
DH F S ++SL+D ST+ RHL QIH QL+ GLQ F+ TK V SSNLG I YA
Sbjct: 45 DHDPCFKSHSFYASLIDNSTHIRHLNQIHNQLIVSGLQHDRFVMTKLVTESSNLGHIFYA 104
Query: 260 RKLFDE 277
RKLFD+
Sbjct: 105 RKLFDK 110
>ref|XP_003621820.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula] gi|355496835|gb|AES78038.1|
Pentatricopeptide repeat-containing protein, partial
[Medicago truncatula]
Length = 114
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Frame = +2
Query: 83 HPNSFD----PDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEI 250
+P+ FD S ++SL+D ST+ HL Q+H QLV GLQ + FL TK V+ SSNLG+I
Sbjct: 36 YPHEFDHCFKSHSFYASLIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQI 95
Query: 251 NYARKLFDE 277
YARKLFDE
Sbjct: 96 FYARKLFDE 104
>ref|XP_007217805.1| hypothetical protein PRUPE_ppa026585mg [Prunus persica]
gi|462413955|gb|EMJ19004.1| hypothetical protein
PRUPE_ppa026585mg [Prunus persica]
Length = 715
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +2
Query: 23 LKHFXXXXXXXXXDCYEDPDHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESN 202
L H+ Y D S+D DS F+SL+D ST K HL QIHAQL+ LGLQ+S
Sbjct: 42 LSHYCSSALRLDPCYYGDQQLHYSYDSDSFFASLIDGSTQKSHLGQIHAQLLVLGLQDSG 101
Query: 203 FLATKFVHVSSNLG 244
FL TK V+ SSNLG
Sbjct: 102 FLITKLVNASSNLG 115
>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 104 DSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFDEI 280
DS ++SL+D ST+K L QIHA+L+ LGLQ S FL TK +H SS+ G+I +AR++FD++
Sbjct: 21 DSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDL 79
>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor
22 [Arabidopsis thaliana]
Length = 694
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = +2
Query: 104 DSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFDEI 280
DS ++SL+D +T+K L QIHA+L+ LGLQ S FL TK +H SS+ G+I +AR++FD++
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = +2
Query: 104 DSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFDEI 280
DS ++SL+D +T+K L QIHA+L+ LGLQ S FL TK +H SS+ G+I +AR++FD++
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
gi|557108442|gb|ESQ48749.1| hypothetical protein
EUTSA_v10020185mg [Eutrema salsugineum]
Length = 694
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 HPNS-FDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYA 259
H NS DS +++L+D ST+K L QIHA+L+ LGLQ S FL TK +H SS+ G+I +A
Sbjct: 13 HSNSGIHSDSFYAALIDGSTHKSQLRQIHARLLVLGLQFSGFLITKLIHASSSFGDICFA 72
Query: 260 RKLFDEI 280
R++FD++
Sbjct: 73 RQVFDDL 79
>ref|XP_002319950.1| hypothetical protein POPTR_0013s14820g [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| hypothetical protein
POPTR_0013s14820g [Populus trichocarpa]
Length = 746
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/69 (46%), Positives = 49/69 (71%)
Frame = +2
Query: 71 EDPDHPNSFDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEI 250
+D + ++F PD ++SL+D S +K HL QI+A+L+ GLQ FL K V+ +SN+GE+
Sbjct: 64 KDDCNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEV 123
Query: 251 NYARKLFDE 277
+ ARKLFD+
Sbjct: 124 SCARKLFDK 132
>ref|XP_002522705.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538055|gb|EEF39667.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 501
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +2
Query: 95 FDPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFD 274
FDP + F+SL+D S N+ HL QIHAQL LQ + FL TK V+ + LGEI YAR +FD
Sbjct: 43 FDPCTFFASLIDNSVNRSHLNQIHAQLFVSRLQYNGFLITKLVNCCATLGEIRYARNVFD 102
>gb|EXC06936.1| hypothetical protein L484_007616 [Morus notabilis]
Length = 734
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +2
Query: 107 SIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFDE 277
S ++ LL ST+K+HL QIHAQL+ GLQ++ FL TK V+VSS++G YARKLFDE
Sbjct: 64 SFYAYLLGSSTHKKHLDQIHAQLLISGLQQNGFLITKLVNVSSDIGCNFYARKLFDE 120
>ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Capsella rubella]
gi|482568222|gb|EOA32411.1| hypothetical protein
CARUB_v10015683mg [Capsella rubella]
Length = 694
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/59 (49%), Positives = 44/59 (74%)
Frame = +2
Query: 104 DSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFDEI 280
DS ++SL+D ST+K L QIHA+L+ LGL S FL TK + SS+ G++ +AR++FD++
Sbjct: 21 DSFYASLIDSSTHKAQLRQIHARLLVLGLHFSGFLITKLIQASSSFGDVTFARQVFDDL 79
>gb|EPS72721.1| hypothetical protein M569_02036 [Genlisea aurea]
Length = 625
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/57 (42%), Positives = 44/57 (77%)
Frame = +2
Query: 104 DSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFD 274
+S ++S++++ T++ HL+QIH Q+ + G+Q + F+ TK ++ S++GEI +ARKLFD
Sbjct: 70 ESFYASVVNQCTHRSHLSQIHGQIYSNGMQNNGFIITKLINRCSDIGEIEHARKLFD 126
>ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [Amborella trichopoda]
gi|548861723|gb|ERN19094.1| hypothetical protein
AMTR_s00061p00127300 [Amborella trichopoda]
Length = 430
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 98 DPDSIFSSLLDKSTNKRHLTQIHAQLVALGLQESNFLATKFVHVSSNLGEINYARKLFDE 277
D ++SL+D S++ +HL QIH ++LGLQ++ F A KF++ S E+NYA ++F E
Sbjct: 128 DDIDAYTSLVDNSSHIKHLKQIHGHFLSLGLQKTIFFAAKFINACSKFNELNYACQIFSE 187
Query: 278 I 280
I
Sbjct: 188 I 188