BLASTX nr result

ID: Akebia24_contig00024940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00024940
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65039.1| hypothetical protein VITISV_009459 [Vitis vinifera]    66   6e-09
ref|XP_002316103.2| hypothetical protein POPTR_0010s16940g [Popu...    59   5e-07
ref|XP_007045957.1| T-box transcription factor TBX5, putative is...    59   7e-07

>emb|CAN65039.1| hypothetical protein VITISV_009459 [Vitis vinifera]
          Length = 1250

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 53/161 (32%), Positives = 66/161 (40%), Gaps = 33/161 (20%)
 Frame = +1

Query: 7   NMQSHLNFIKESSIQAVPVPTQNGGXXXXXXXXXXXXXXVSRKGFDLQLPASEYLDCXXX 186
           N    L+FIK +S  A PV  QNGG              + RK F+LQLPA EY+D    
Sbjct: 253 NSHHPLSFIKGNSSPAGPVQFQNGGCSKDCEVLESRPTKLRRKMFNLQLPADEYIDTEEG 312

Query: 187 XXXXXXXAFQASVTNSYSLKRNCEVAPKSDV------------------------NQHGL 294
                       V + Y    NC++AP+S +                        + + L
Sbjct: 313 EQFG-----NNKVPDDYPPNENCKIAPESGIKLFLGSDRKTCRQEDVSKSNFCLRSTNAL 367

Query: 295 ADLNEPVQVELATDSAPV---------REIQGQDLLAKPNS 390
           ADLNEPVQ E A D A V          E Q Q+L AKP S
Sbjct: 368 ADLNEPVQAEEAKDPASVDFLGRPTCHGETQDQELSAKPKS 408


>ref|XP_002316103.2| hypothetical protein POPTR_0010s16940g [Populus trichocarpa]
           gi|550329984|gb|EEF02274.2| hypothetical protein
           POPTR_0010s16940g [Populus trichocarpa]
          Length = 1114

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
 Frame = +1

Query: 7   NMQSHLNFIKESSIQAVPVPTQNGGXXXXXXXXXXXXXXVSRKGFDLQLPASEYLDCXXX 186
           ++ S L+ +K SS QA P+P+QNGG              + R+ FDLQLPA EY+D    
Sbjct: 151 DIHSPLSSMKGSSAQASPLPSQNGGASKDVEILESRPSKLRRRMFDLQLPADEYIDTEEE 210

Query: 187 XXXXXXXAFQASVTNSYSLKRNCEVAPKSDV------------------------NQHGL 294
                      S  +SY   RN ++AP++++                        +   +
Sbjct: 211 EKLRDE---NVSGISSYLPSRNHKIAPQNEIILFLGNGGKSNSQVDASRSESCLRSPINV 267

Query: 295 ADLNEPVQVELATDSAPVREI---------QGQDLLAKP 384
            DLN+PV+VE A  SA V  +         QG +L +KP
Sbjct: 268 GDLNKPVEVEEANASAHVDPLGCASSQAGSQGHELASKP 306


>ref|XP_007045957.1| T-box transcription factor TBX5, putative isoform 1 [Theobroma
           cacao] gi|590699564|ref|XP_007045958.1| T-box
           transcription factor TBX5, putative isoform 1 [Theobroma
           cacao] gi|508709892|gb|EOY01789.1| T-box transcription
           factor TBX5, putative isoform 1 [Theobroma cacao]
           gi|508709893|gb|EOY01790.1| T-box transcription factor
           TBX5, putative isoform 1 [Theobroma cacao]
          Length = 1084

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 50/146 (34%), Positives = 64/146 (43%), Gaps = 24/146 (16%)
 Frame = +1

Query: 4   SNMQSHLNFIKESSIQAVPVPTQNGGXXXXXXXXXXXXXXVSRKGFDLQLPASEYLDCXX 183
           ++  S L+ +K SSIQA P   QNGG              V RK FDLQLPA EY+D   
Sbjct: 150 ADSHSPLSSVKGSSIQAGPFQPQNGGNSKDVEVLECRPTKVRRKMFDLQLPADEYIDTEE 209

Query: 184 XXXXXXXXAFQASVTNSYSLKRNCEVAPKS-------DVNQHG----------------- 291
                      AS  +SY    N ++ P+S       DV + G                 
Sbjct: 210 AEQFRDD---TASGMSSYLPNGNGKIGPESGGKLLHGDVGKTGQQGDASRSDQCLRGTNS 266

Query: 292 LADLNEPVQVELATDSAPVREIQGQD 369
           LADLNEPVQ+E  T+ +   E+ G D
Sbjct: 267 LADLNEPVQIE-ETNGSAYPELLGHD 291


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