BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00024722
         (2234 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   776   0.0  
emb|CBI26575.3| unnamed protein product [Vitis vinifera]              776   0.0  
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co...   610   e-172
ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [S...   554   e-155
gb|EXB64360.1| 5'-3' exoribonuclease 4 [Morus notabilis]              553   e-154
ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   552   e-154
ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   552   e-154
ref|XP_004967800.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   552   e-154
dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japon...   548   e-153
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   535   e-149
ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Caps...   529   e-147
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ...   528   e-147
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu...   527   e-147
ref|XP_006392535.1| hypothetical protein EUTSA_v10023239mg [Eutr...   526   e-146
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   526   e-146
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra...   525   e-146
ref|XP_007208373.1| hypothetical protein PRUPE_ppa000881mg [Prun...   525   e-146
ref|XP_007030646.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma...   520   e-144
ref|XP_004981451.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...   518   e-144
ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] g...   514   e-143

>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 834

 Score =  776 bits (2003), Expect = 0.0
 Identities = 393/560 (70%), Positives = 448/560 (80%), Gaps = 9/560 (1%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSR-VNQQEKNKELKLGQVEGE 2057
            LDADLIMLAL THEIHFSILREDV KA   DK     K+S  VN++ K+K+   G+V GE
Sbjct: 232  LDADLIMLALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQ---GEVGGE 288

Query: 2056 DNIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHM 1877
            D  D+IS+Q+FQFLNIW LRDYL HD+ IPD ++  DLERLIDDFV MC+FVGNDFLPHM
Sbjct: 289  DIEDFISRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHM 348

Query: 1876 PSLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV 1697
            PSLEISEGAIDLLMTVYKKEFV++GGYLT+SSEV LERV+ F+QVVGSHENAIFRKR+QV
Sbjct: 349  PSLEISEGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV 408

Query: 1696 QKEREKIFERLSNRKRGNGK------QKQNSGKLWYSDLIP--TPICSTSQSSCAKESQS 1541
            QK+R   F+  SN+K  +        + Q       S L P  TP C  S++S  KE Q 
Sbjct: 409  QKKRGVRFQGSSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQC 468

Query: 1540 PINNTRPDDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVM 1361
               N     A ++VD IKLGE+GWKERFY EKFEA TED+RE++RR AVLKYIEGICWVM
Sbjct: 469  S-TNCISTGANSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVM 527

Query: 1360 CYYYQGVCSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALP 1181
             YYYQGVCSWQWFYPYHYAPFASD Y LD+L+I FTLG+PFKPFDQLMGVLPAASAHALP
Sbjct: 528  HYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALP 587

Query: 1180 LFYRKLMTDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTD 1001
            L+YRKLM D +SPILDFYP DFELDMNGKR+ WQAICKLPFIKESRLLAEI KV+ TLTD
Sbjct: 588  LYYRKLMMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTD 647

Query: 1000 EEKQRNSLGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIY 821
            +EK RN LG+DALFIH+S PLA KIFSF KRKK HPKLP AKVKRKI+PKFS GMNGY+Y
Sbjct: 648  KEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMY 707

Query: 820  ISDKPVWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDIL 641
            ISD+PVWP EF+SPI+DME+I  +KVIS+FYK P  HPH+PRP EGV++P  +V K  +L
Sbjct: 708  ISDRPVWPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKPHLL 767

Query: 640  PPQPLWHEESAVRGRVFFER 581
             P  LWHE SAV GR F ER
Sbjct: 768  RPPVLWHETSAVCGRKFSER 787


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  776 bits (2003), Expect = 0.0
 Identities = 393/560 (70%), Positives = 448/560 (80%), Gaps = 9/560 (1%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSR-VNQQEKNKELKLGQVEGE 2057
            LDADLIMLAL THEIHFSILREDV KA   DK     K+S  VN++ K+K+   G+V GE
Sbjct: 213  LDADLIMLALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQ---GEVGGE 269

Query: 2056 DNIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHM 1877
            D  D+IS+Q+FQFLNIW LRDYL HD+ IPD ++  DLERLIDDFV MC+FVGNDFLPHM
Sbjct: 270  DIEDFISRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHM 329

Query: 1876 PSLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV 1697
            PSLEISEGAIDLLMTVYKKEFV++GGYLT+SSEV LERV+ F+QVVGSHENAIFRKR+QV
Sbjct: 330  PSLEISEGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV 389

Query: 1696 QKEREKIFERLSNRKRGNGK------QKQNSGKLWYSDLIP--TPICSTSQSSCAKESQS 1541
            QK+R   F+  SN+K  +        + Q       S L P  TP C  S++S  KE Q 
Sbjct: 390  QKKRGVRFQGSSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNSTVKEIQC 449

Query: 1540 PINNTRPDDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVM 1361
               N     A ++VD IKLGE+GWKERFY EKFEA TED+RE++RR AVLKYIEGICWVM
Sbjct: 450  S-TNCISTGANSLVDKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVM 508

Query: 1360 CYYYQGVCSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALP 1181
             YYYQGVCSWQWFYPYHYAPFASD Y LD+L+I FTLG+PFKPFDQLMGVLPAASAHALP
Sbjct: 509  HYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALP 568

Query: 1180 LFYRKLMTDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTD 1001
            L+YRKLM D +SPILDFYP DFELDMNGKR+ WQAICKLPFIKESRLLAEI KV+ TLTD
Sbjct: 569  LYYRKLMMDETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTD 628

Query: 1000 EEKQRNSLGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIY 821
            +EK RN LG+DALFIH+S PLA KIFSF KRKK HPKLP AKVKRKI+PKFS GMNGY+Y
Sbjct: 629  KEKLRNRLGMDALFIHISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMY 688

Query: 820  ISDKPVWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDIL 641
            ISD+PVWP EF+SPI+DME+I  +KVIS+FYK P  HPH+PRP EGV++P  +V K  +L
Sbjct: 689  ISDRPVWPAEFYSPIEDMEMIAQNKVISIFYKCPSFHPHIPRPLEGVILPGKTVIKPHLL 748

Query: 640  PPQPLWHEESAVRGRVFFER 581
             P  LWHE SAV GR F ER
Sbjct: 749  RPPVLWHETSAVCGRKFSER 768


>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1545

 Score =  610 bits (1573), Expect = e-172
 Identities = 346/697 (49%), Positives = 445/697 (63%), Gaps = 7/697 (1%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HF+ILRE    AQ +  KR        N Q+K    K   +  + 
Sbjct: 229  LDADLIMLALATHEVHFTILREVC--AQKHSSKRGKKHKFVWNPQKKANSKKKKWMPVKT 286

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
              +Y+S+  F+FL IW LR++L +D+RIP+ A+  DLERLIDDF+ MC+FVGNDFLPH+P
Sbjct: 287  LEEYVSRLNFKFLYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPHIP 346

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEIS+GAIDLLM VY+KEF RMGGYLT+S E++L RV+HFIQ VG H++AIFR+  Q  
Sbjct: 347  TLEISQGAIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHIQKL 406

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            KE+    E  S++++          KL  +D  P     +  SS   E    +N   P  
Sbjct: 407  KEKSARKEERSSKRKLE--------KLLQND--PHAESISGGSSLLMEKAGGMNFDEPIH 456

Query: 1513 AIAV-VDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVC 1337
             ++  +D     E+ WKER+YA+KF+A T+DE+E IRR  V+KY+EG+CWVM YYY+GVC
Sbjct: 457  HLSAGIDTGDKEEDDWKERYYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVC 516

Query: 1336 SWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMT 1157
            SWQWFYPYHYAPFASDFY LD L+I FTLG PFKP DQLMGVLPAASAHALP+ YRKLMT
Sbjct: 517  SWQWFYPYHYAPFASDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMT 576

Query: 1156 DSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSL 977
            D SSPILDFYP DFELDMNGKR  WQAICKLPFI ESRLL+EITKV+ TLTD+E++RNSL
Sbjct: 577  DESSPILDFYPSDFELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSL 636

Query: 976  GLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVWP 797
            G + LF+H+SHPLA  I  F K+ +         V  KI+P+ S GMNG++YISD  V P
Sbjct: 637  GSNFLFVHISHPLADMIIYFFKQNR------DPNVLLKIDPELSGGMNGFVYISDNAVCP 690

Query: 796  LEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWHE 617
             E  SP+D M +I +++VISV Y+YPL H H+ R P+GV++P   +         PL   
Sbjct: 691  EEVSSPVDGMRMIAHNRVISVSYRYPLFHYHISRLPQGVILPGKDI--------SPLLQH 742

Query: 616  ESAVRGRVFFERPVPKSISGSSLSQMSHRLVSQHYLVPKKKTE-----GPAELDGRITRN 452
            E  V   V   RP+P+S+SG+ L+ ++HRLVS     P K+ +     GP  L       
Sbjct: 743  EKVVPAGVSSRRPIPRSVSGTHLANLAHRLVSS--CTPIKQDDNLGYKGPNILVDTCNWG 800

Query: 451  VSSHQPNSQAMIHVKKMGDGKGIQMNGTKLGKRKQGDRSIEGQKLKTAEPAE-VNGHISK 275
              S   NS+     +K    K I ++    G R +    I  Q LK   P E  +G+ + 
Sbjct: 801  GISTTLNSRK----RKRSRNKKITIDDGYEGSRMREGECIP-QNLKQCIPLEHTDGNCNP 855

Query: 274  VMVHEKKKGNGEGIHVNGTKLGKRKQDGPSIKNKKLK 164
              V E+K        +   K  +RKQ    +K KK+K
Sbjct: 856  CAVKERK------AEIRSAKRKRRKQ---RMKLKKIK 883


>ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
            gi|241929576|gb|EES02721.1| hypothetical protein
            SORBIDRAFT_03g010040 [Sorghum bicolor]
          Length = 1066

 Score =  554 bits (1427), Expect = e-155
 Identities = 303/633 (47%), Positives = 383/633 (60%), Gaps = 63/633 (9%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE V      DK    G+   +    + K  +      E 
Sbjct: 232  LDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDEK 291

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
                + K+ +QFLNIW LR+YL ++ R+P+P    D ER++DDF+ MC FVGNDFLPHMP
Sbjct: 292  GDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMP 351

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV- 1697
            +LEI EGAI+LLM VYKKEF  MGGYLTDS   +L RV+HFIQ VGS+E+ IF+KR ++ 
Sbjct: 352  TLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLH 411

Query: 1696 QKEREKIFERLSNRKRGNGKQ-----------KQNSGKLWYSDLIPTPI----------- 1583
            Q++ E+I    +  KRG+              ++  G    S  +P P            
Sbjct: 412  QRQAERIKRDKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPVPYQQNGSHRNNKE 471

Query: 1582 ----------CSTSQSSCA-----------------------------KESQSPINNTRP 1520
                       STS SS +                             +E     N+  P
Sbjct: 472  RNSRAPKVARVSTSGSSISAAIVEAENDLEAQERENKEELKSMLKDALREKSDIFNSDNP 531

Query: 1519 DDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGV 1340
            D+     D +KLGE GW+ER+Y EKF A T ++ E+IRR  VLKY EG+CWVM YYY+GV
Sbjct: 532  DE-----DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586

Query: 1339 CSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLM 1160
            CSWQWFYPYHYAPFASD   L +L I F LG PFKPFDQLMGV PAASAHALPL YR+LM
Sbjct: 587  CSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRQLM 646

Query: 1159 TDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNS 980
            TD  SPI+DFYP DFE+DMNGKR++WQ I KLPFI E+RLLAEI KV+ TLT EE +RNS
Sbjct: 647  TDPHSPIIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 706

Query: 979  LGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVW 800
            +  D LF++ SHPL+  I+S   +    P   + ++K K++P  S GMNGYI +      
Sbjct: 707  IMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKKRNEIKEKLDPSASGGMNGYITLCSGDPC 766

Query: 799  PLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWH 620
            P  F SP+D +E I +++VI   YK P  H H+ RPP GV+IP+ +V   D+ PP  LWH
Sbjct: 767  PPIFRSPVDGLEDIMDNQVICSIYKLPDHHKHIARPPVGVIIPKKTVEAGDLKPPPVLWH 826

Query: 619  EESAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            E+S  R      R   P +ISG  L + +HRLV
Sbjct: 827  EDSGRRPHDNSNRQNPPGAISGRQLGEAAHRLV 859


>gb|EXB64360.1| 5'-3' exoribonuclease 4 [Morus notabilis]
          Length = 1572

 Score =  553 bits (1424), Expect = e-154
 Identities = 305/587 (51%), Positives = 394/587 (67%), Gaps = 1/587 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THEIHFSILREDV+K  +      F K+ R + Q    ++   +V  E 
Sbjct: 229  LDADLIMLALATHEIHFSILREDVKKPSS------FKKSGRYSSQIVPLQV---EVVSET 279

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
              DYISK +FQFL++W+LR+YL + + IPD     DLERLIDDFVL+C+FVGNDFLPHMP
Sbjct: 280  TEDYISKLKFQFLHVWILREYLSYAMEIPDQK-DGDLERLIDDFVLICLFVGNDFLPHMP 338

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            SLEISEGAIDLLMT+YKKEFVRMGGY+T S +VNL ++++F++ VGSHE AI RKR Q +
Sbjct: 339  SLEISEGAIDLLMTIYKKEFVRMGGYITKSFKVNLNKMKYFLEAVGSHEGAILRKRGQKK 398

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            KER+ +  R S                  + +  TP+   S +S A E ++P  +     
Sbjct: 399  KERDFLDRRFSKN----------------TSVRTTPVGGDSMNSRALEVRAPKGSVSL-S 441

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
                VD IK GE GWKER+YAEKFEA TED+ E+IR+   ++   G+C  +         
Sbjct: 442  TTTKVDKIKYGEVGWKERYYAEKFEAETEDDCERIRQD--VRAFAGLCITIMKV------ 493

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAH-ALPLFYRKLMT 1157
                    YAP  +DF+ + +L+I FTLG+PFKP DQLM VLP+ASAH ALPLFYRKLMT
Sbjct: 494  --------YAP-GNDFHDIGKLKIQFTLGQPFKPVDQLMAVLPSASAHAALPLFYRKLMT 544

Query: 1156 DSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSL 977
            ++SSP+  FYP DFELD+NGKRF+WQAICKLPFI+ES LL+EI +V+ TLTDEE++RN L
Sbjct: 545  ETSSPLFAFYPTDFELDLNGKRFSWQAICKLPFIEESLLLSEIARVEHTLTDEERRRNRL 604

Query: 976  GLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVWP 797
            GLD LF+H SH  +  +  F +R +       A+VK KINPKFS GMNGY++I DK V P
Sbjct: 605  GLDVLFVHSSHSFSESLVLFSQRNEL-----VAQVKEKINPKFSAGMNGYMFIPDKTVKP 659

Query: 796  LEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWHE 617
             +  SPID ME+I N+KV+S+FY  P    H+PRPPE V  P   + K+DI P   LWHE
Sbjct: 660  EQIDSPIDGMEMIANNKVLSLFYDNPRFLGHIPRPPEKVAWPSKCICKKDIKPKPFLWHE 719

Query: 616  ESAVRGRVFFERPVPKSISGSSLSQMSHRLVSQHYLVPKKKTEGPAE 476
            ++AV GR+    P+  S+SGS L++ + +LV    L  ++K+ G  E
Sbjct: 720  QTAVVGRLHSLMPIRNSVSGSHLAKSARQLVLTWCLEMQQKSTGSLE 766


>ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Setaria italica]
          Length = 866

 Score =  552 bits (1423), Expect = e-154
 Identities = 302/633 (47%), Positives = 383/633 (60%), Gaps = 63/633 (9%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE V      DK    G+   +    + K  +      E 
Sbjct: 24   LDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEK 83

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
                + K+ +QFLNIW LR+YL ++ R+P+P    D ER++DDF+ MC FVGNDFLPHMP
Sbjct: 84   GDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMP 143

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV- 1697
            +LEI EGAI+LLM VYKKEF  MGGYLTDS   +L RV+HFIQ VGS+E+ IF+KR ++ 
Sbjct: 144  TLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLH 203

Query: 1696 QKEREKIFERLSNRKRGNGKQ-----------KQNSGKLWYSDLIPTPI----------- 1583
            Q++ E+I    +  KRG+              ++  G    S  +P P            
Sbjct: 204  QRQAERIKREKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPAPYEQNGSHKDNKE 263

Query: 1582 ----------CSTSQSSCA-----------------------------KESQSPINNTRP 1520
                       STS SS A                             +E     N+  P
Sbjct: 264  MNNRARKAARVSTSGSSIAAAIVEAENDLEAQERENKEELKSMLKDALREKSDIFNSENP 323

Query: 1519 DDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGV 1340
            ++     D +KLGE GW+ER+Y EKF A T ++ E+IRR  VLKY EG+CWVM YYY+GV
Sbjct: 324  EE-----DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 378

Query: 1339 CSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLM 1160
            CSWQWFYPYHYAPFASD   L +L I F LG PFKPFDQLMGV PAASAHALPL YR+LM
Sbjct: 379  CSWQWFYPYHYAPFASDLRDLGQLGITFELGTPFKPFDQLMGVFPAASAHALPLQYRRLM 438

Query: 1159 TDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNS 980
             D +SPI+DFYP DFE+DMNGKR++WQ I KLPFI E+RLLAEI KV+ TLT EE +RNS
Sbjct: 439  MDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 498

Query: 979  LGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVW 800
            +  D LF++ SHPL+  I+S   +    P   + ++K K++P  S GMNGYI +      
Sbjct: 499  VMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKERNEIKEKLDPSASGGMNGYITLCSGDPC 558

Query: 799  PLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWH 620
            P  F SP+D +E I +++VI   YK P  H H+ RPP GV+IP+ +V   D+ PP  LWH
Sbjct: 559  PPIFRSPVDGLEDIMDNQVICSIYKLPDHHKHIARPPAGVIIPKKTVEAGDLKPPPVLWH 618

Query: 619  EESAVRGRVFFER-PVPKSISGSSLSQMSHRLV 524
            E+S  R      R   P +ISG  L + +HRLV
Sbjct: 619  EDSGRRPHDNSNRHNPPGAISGRQLGEAAHRLV 651


>ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Setaria italica]
          Length = 994

 Score =  552 bits (1423), Expect = e-154
 Identities = 302/633 (47%), Positives = 383/633 (60%), Gaps = 63/633 (9%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE V      DK    G+   +    + K  +      E 
Sbjct: 152  LDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEK 211

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
                + K+ +QFLNIW LR+YL ++ R+P+P    D ER++DDF+ MC FVGNDFLPHMP
Sbjct: 212  GDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMP 271

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV- 1697
            +LEI EGAI+LLM VYKKEF  MGGYLTDS   +L RV+HFIQ VGS+E+ IF+KR ++ 
Sbjct: 272  TLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLH 331

Query: 1696 QKEREKIFERLSNRKRGNGKQ-----------KQNSGKLWYSDLIPTPI----------- 1583
            Q++ E+I    +  KRG+              ++  G    S  +P P            
Sbjct: 332  QRQAERIKREKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPAPYEQNGSHKDNKE 391

Query: 1582 ----------CSTSQSSCA-----------------------------KESQSPINNTRP 1520
                       STS SS A                             +E     N+  P
Sbjct: 392  MNNRARKAARVSTSGSSIAAAIVEAENDLEAQERENKEELKSMLKDALREKSDIFNSENP 451

Query: 1519 DDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGV 1340
            ++     D +KLGE GW+ER+Y EKF A T ++ E+IRR  VLKY EG+CWVM YYY+GV
Sbjct: 452  EE-----DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 506

Query: 1339 CSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLM 1160
            CSWQWFYPYHYAPFASD   L +L I F LG PFKPFDQLMGV PAASAHALPL YR+LM
Sbjct: 507  CSWQWFYPYHYAPFASDLRDLGQLGITFELGTPFKPFDQLMGVFPAASAHALPLQYRRLM 566

Query: 1159 TDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNS 980
             D +SPI+DFYP DFE+DMNGKR++WQ I KLPFI E+RLLAEI KV+ TLT EE +RNS
Sbjct: 567  MDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 626

Query: 979  LGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVW 800
            +  D LF++ SHPL+  I+S   +    P   + ++K K++P  S GMNGYI +      
Sbjct: 627  VMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKERNEIKEKLDPSASGGMNGYITLCSGDPC 686

Query: 799  PLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWH 620
            P  F SP+D +E I +++VI   YK P  H H+ RPP GV+IP+ +V   D+ PP  LWH
Sbjct: 687  PPIFRSPVDGLEDIMDNQVICSIYKLPDHHKHIARPPAGVIIPKKTVEAGDLKPPPVLWH 746

Query: 619  EESAVRGRVFFER-PVPKSISGSSLSQMSHRLV 524
            E+S  R      R   P +ISG  L + +HRLV
Sbjct: 747  EDSGRRPHDNSNRHNPPGAISGRQLGEAAHRLV 779


>ref|XP_004967800.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Setaria italica]
          Length = 1074

 Score =  552 bits (1423), Expect = e-154
 Identities = 302/633 (47%), Positives = 383/633 (60%), Gaps = 63/633 (9%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE V      DK    G+   +    + K  +      E 
Sbjct: 232  LDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEK 291

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
                + K+ +QFLNIW LR+YL ++ R+P+P    D ER++DDF+ MC FVGNDFLPHMP
Sbjct: 292  GDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMP 351

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV- 1697
            +LEI EGAI+LLM VYKKEF  MGGYLTDS   +L RV+HFIQ VGS+E+ IF+KR ++ 
Sbjct: 352  TLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLH 411

Query: 1696 QKEREKIFERLSNRKRGNGKQ-----------KQNSGKLWYSDLIPTPI----------- 1583
            Q++ E+I    +  KRG+              ++  G    S  +P P            
Sbjct: 412  QRQAERIKREKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPAPYEQNGSHKDNKE 471

Query: 1582 ----------CSTSQSSCA-----------------------------KESQSPINNTRP 1520
                       STS SS A                             +E     N+  P
Sbjct: 472  MNNRARKAARVSTSGSSIAAAIVEAENDLEAQERENKEELKSMLKDALREKSDIFNSENP 531

Query: 1519 DDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGV 1340
            ++     D +KLGE GW+ER+Y EKF A T ++ E+IRR  VLKY EG+CWVM YYY+GV
Sbjct: 532  EE-----DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGV 586

Query: 1339 CSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLM 1160
            CSWQWFYPYHYAPFASD   L +L I F LG PFKPFDQLMGV PAASAHALPL YR+LM
Sbjct: 587  CSWQWFYPYHYAPFASDLRDLGQLGITFELGTPFKPFDQLMGVFPAASAHALPLQYRRLM 646

Query: 1159 TDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNS 980
             D +SPI+DFYP DFE+DMNGKR++WQ I KLPFI E+RLLAEI KV+ TLT EE +RNS
Sbjct: 647  MDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNS 706

Query: 979  LGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVW 800
            +  D LF++ SHPL+  I+S   +    P   + ++K K++P  S GMNGYI +      
Sbjct: 707  VMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKERNEIKEKLDPSASGGMNGYITLCSGDPC 766

Query: 799  PLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWH 620
            P  F SP+D +E I +++VI   YK P  H H+ RPP GV+IP+ +V   D+ PP  LWH
Sbjct: 767  PPIFRSPVDGLEDIMDNQVICSIYKLPDHHKHIARPPAGVIIPKKTVEAGDLKPPPVLWH 826

Query: 619  EESAVRGRVFFER-PVPKSISGSSLSQMSHRLV 524
            E+S  R      R   P +ISG  L + +HRLV
Sbjct: 827  EDSGRRPHDNSNRHNPPGAISGRQLGEAAHRLV 859


>dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
          Length = 1064

 Score =  548 bits (1413), Expect = e-153
 Identities = 301/640 (47%), Positives = 385/640 (60%), Gaps = 70/640 (10%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE V      DK    G+   +    + K  +      E 
Sbjct: 232  LDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEK 291

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
                + K+ +QFLNIW LR+YL ++ R+ +P    D ER++DDF+ MC FVGNDFLPHMP
Sbjct: 292  GEAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMP 351

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQV- 1697
            +LEI EGAI+LLM VYKKEF  MGGYLTD+   +L +V+HFIQ VGS+E+ IF+KR ++ 
Sbjct: 352  TLEIREGAINLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLH 411

Query: 1696 QKEREKIFERLSNRKRG----------------------------------NGKQKQNSG 1619
            Q++ E+I    +  KRG                                  NG  K N G
Sbjct: 412  QRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQNGSDKNNGG 471

Query: 1618 KLWYSDLIPTPICSTSQSSCA-----------------------------KESQSPINNT 1526
            K   S        S+S SS A                             +E     N+ 
Sbjct: 472  K--NSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSE 529

Query: 1525 RPDDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQ 1346
             P++     D IKLGE GW+ER+Y EKF A T  + E+IRR  VLKY EG+CWVM YYY+
Sbjct: 530  NPEE-----DKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYE 584

Query: 1345 GVCSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRK 1166
            GVCSWQWFYPYHYAPFASD   L +L I F LG PFKPFDQLMGV PAAS+HALP+ YR+
Sbjct: 585  GVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQ 644

Query: 1165 LMTDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQR 986
            LMTD++SPI+DFYP DFE+DMNGKR++WQ I KLPFI E+RLLAEI KV+ TLT EE +R
Sbjct: 645  LMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARR 704

Query: 985  NSLGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKP 806
            NS+  + LF++ SHPL+  I+S   +    P   + ++K KI+P  S GMNGYI +    
Sbjct: 705  NSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGD 764

Query: 805  VWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPL 626
              P  F SP+D +E I +++VI   YK P  H H+ RPP GV+IP+ +V   D+ PP  L
Sbjct: 765  PCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVL 824

Query: 625  WHEESAVRG------RVFFERPVPKSISGSSLSQMSHRLV 524
            WHE+S  R       ++F + P   +ISG  L + +HRLV
Sbjct: 825  WHEDSGRRENPNLLVKLFRQNPA-GAISGRQLGEAAHRLV 863


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score =  535 bits (1378), Expect = e-149
 Identities = 283/578 (48%), Positives = 379/578 (65%), Gaps = 8/578 (1%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THEIHFSILRE V      +K  + G+   +    + K        G++
Sbjct: 233  LDADLIMLALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKP-------GDN 285

Query: 2053 NIDY-------ISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGN 1895
             +D+       I K+++QFLNIWVLR+YL ++L +P+P +  + ER++DDFV +C FVGN
Sbjct: 286  PLDWNVEDDVPIHKKKYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGN 345

Query: 1894 DFLPHMPSLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIF 1715
            DFLPHMP+LEI EGAI+LLM VY++EF  MGGYLTD+ EVNL+RV+HFIQ V  +E  IF
Sbjct: 346  DFLPHMPTLEIREGAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIF 405

Query: 1714 RKRTQVQKEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPI 1535
            +KRT++Q       + L N +    K ++ S                     ++E Q+P 
Sbjct: 406  QKRTRIQ-------QFLENNEEMRLKARRES---------------------SEEIQTP- 436

Query: 1534 NNTRPDDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCY 1355
                       VD +KLGE G+KER+YAEKF   T DE +K+R   VLKY+EG+CWV  Y
Sbjct: 437  ----------AVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRNDVVLKYVEGLCWVCRY 486

Query: 1354 YYQGVCSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLF 1175
            YYQGVCSWQWFYPYHYAPFASD   L  LEI F LGEPFKPFDQLMG LPAAS++ALP  
Sbjct: 487  YYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFLGEPFKPFDQLMGTLPAASSNALPEE 546

Query: 1174 YRKLMTDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEE 995
            YRKLMTDSSSPI  F+P DFE+DMNGKRFAWQ I KLPFI E +LLA+  K++ TLT+EE
Sbjct: 547  YRKLMTDSSSPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEE 606

Query: 994  KQRNSLGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYIS 815
            + RNS+ LD L++H +HP+AA++ +  +   + P+  +      I+   S GMNGY+++S
Sbjct: 607  RLRNSVMLDLLYVHPAHPMAAEVIAHYQGFNSLPQYQRK--PWAIDTNASAGMNGYLWLS 664

Query: 814  DKPVWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPP 635
            ++ +W     SP++    I +++V+++ Y  P+ H H+P PP GVV+P   ++  DI P 
Sbjct: 665  ERNMWRSTIASPVNGFPDIEHNQVLNITYLNPINHRHIPEPPNGVVMPEKILKPLDIKPF 724

Query: 634  QPLWHEESAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
              LWHE+   R +   ERP V ++I+G  L + +HRLV
Sbjct: 725  PMLWHEDHGGRRQQGRERPQVARAIAGPLLGEAAHRLV 762


>ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Capsella rubella]
            gi|482569950|gb|EOA34138.1| hypothetical protein
            CARUB_v10021640mg [Capsella rubella]
          Length = 948

 Score =  529 bits (1362), Expect = e-147
 Identities = 282/571 (49%), Positives = 367/571 (64%), Gaps = 1/571 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE +      +K    G+          K    G      
Sbjct: 233  LDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFAADCPGKS---GSANAAS 289

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
            +I  I K+++QFLNIW+LR+YL ++L IPDP    + ER+IDDFV +C FVGNDFLPHMP
Sbjct: 290  DIP-IHKKKYQFLNIWILREYLQYELAIPDPPFVINFERIIDDFVFLCFFVGNDFLPHMP 348

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM VY+KEF  MGGYLTDS EV L+RV+HFIQ V  +E+ IF+KRT+++
Sbjct: 349  TLEIREGAINLLMHVYRKEFSIMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIK 408

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            +  +            N + KQ S +                      S++P     P D
Sbjct: 409  QSMDN-----------NEEMKQRSRR--------------------DPSEAP---PEPID 434

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
                 D IKLGE G+KER+YAEKF  N  +E E I++  VLKY+EG+CWV  YYYQGVCS
Sbjct: 435  -----DKIKLGEPGYKERYYAEKFSTNNPEETEPIKQDMVLKYVEGLCWVCRYYYQGVCS 489

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMTD 1154
            WQWFYPYHYAPFASD  +L  LEI F +GEPFKPFDQLMG LPAAS++ALP  YRKLMT+
Sbjct: 490  WQWFYPYHYAPFASDLKNLSDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTN 549

Query: 1153 SSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSLG 974
             SSPIL FYP DFE+DMNGKRFAWQ I KLPFI+E  LLA   K+++TLT EE+QRNS+ 
Sbjct: 550  PSSPILKFYPADFEIDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEERQRNSVM 609

Query: 973  LDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVWPL 794
            LD L++H +HPL  +I  +    +  P  P   +   I+P  S GMNG+++IS++  +  
Sbjct: 610  LDLLYVHPAHPLGQRILQYYHFYQHLP--PHEFIPWTIDPNSSQGMNGFLWISERNGFQT 667

Query: 793  EFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWHEE 614
               SP++ +  I  ++ ++V Y  P  H H+  PP G +IP   +   DI P  PLWHE+
Sbjct: 668  RVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWHED 727

Query: 613  SAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            ++ R R   +RP V  +I+G SL + +HRL+
Sbjct: 728  NSNRRRQSRDRPQVAGAIAGPSLGEAAHRLI 758


>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
            gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
            exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
            1; AltName: Full=Protein ETHYLENE INSENSITIVE 5; AltName:
            Full=Protein EXORIBONUCLEASE 4
            gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
            thaliana] gi|17381112|gb|AAL36368.1| putative exonuclease
            [Arabidopsis thaliana] gi|20259665|gb|AAM14350.1|
            putative exonuclease [Arabidopsis thaliana]
            gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis
            thaliana] gi|332194988|gb|AEE33109.1| 5'-3'
            exoribonuclease 4 [Arabidopsis thaliana]
          Length = 947

 Score =  528 bits (1359), Expect = e-147
 Identities = 285/574 (49%), Positives = 367/574 (63%), Gaps = 4/574 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE +      +K    G+          K    G      
Sbjct: 233  LDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKS---GSNNAAA 289

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
            +I  I K+++QFLNIWVLR+YL ++L IPDP    + ER+IDDFV +C FVGNDFLPHMP
Sbjct: 290  DIP-IHKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMP 348

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM VY+KEF  MGGYLTDS EV L+RV+HFIQ V  +E+ IF+KRT+++
Sbjct: 349  TLEIREGAINLLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIK 408

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            +  +            N + KQ S +   S++ P PI                       
Sbjct: 409  QSMDN-----------NEEMKQRSRRD-PSEVPPEPID---------------------- 434

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
                 D IKLGE G+KER+YAEKF     +E E+I++  VLKY+EG+CWV  YYYQGVCS
Sbjct: 435  -----DKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCS 489

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMTD 1154
            WQWFYPYHYAPFASD  +L  LEI F +GEPFKPFDQLMG LPAAS++ALP  YRKLMTD
Sbjct: 490  WQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTD 549

Query: 1153 SSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSLG 974
             SSPIL FYP DFELDMNGKRFAWQ I KLPFI+E  LLA   K+++TLT EE+QRNS+ 
Sbjct: 550  PSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVM 609

Query: 973  LDALFIHVSHPLAAKI---FSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPV 803
            LD L++H +HPL  +I   + F +    H  LP       I+P  S GMNG+++ S++  
Sbjct: 610  LDLLYVHPAHPLGQRILQYYHFYQHMPPHECLP-----WMIDPNSSQGMNGFLWFSERNG 664

Query: 802  WPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLW 623
            +     SP++ +  I  ++ ++V Y  P  H H+  PP G +IP   +   DI P  PLW
Sbjct: 665  FQTRVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLW 724

Query: 622  HEESAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            HE+++ R R   +RP V  +I+G SL + +HRL+
Sbjct: 725  HEDNSNRRRQARDRPQVVGAIAGPSLGEAAHRLI 758


>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
            gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
            protein [Populus trichocarpa]
          Length = 948

 Score =  527 bits (1357), Expect = e-147
 Identities = 279/580 (48%), Positives = 374/580 (64%), Gaps = 10/580 (1%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE V      DK    G+   +  + + K+       G+D
Sbjct: 233  LDADLIMLSLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQ-------GDD 285

Query: 2053 NIDY-------ISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGN 1895
             +D+       I K+++QFLNIWVLR+YL +DL IP+P    D E+++DDFV MC FVGN
Sbjct: 286  ALDWNVVDDTPIHKKKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGN 345

Query: 1894 DFLPHMPSLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIF 1715
            DFLPHMP+LEI EGAI+LLM +Y++EF  MGGYLT + EV L++V+HFIQ V  +E  IF
Sbjct: 346  DFLPHMPTLEIREGAINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIF 405

Query: 1714 RKRTQVQKEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPI 1535
            +KR ++Q+  E   E     +R                              ++E Q+P 
Sbjct: 406  QKRARIQQAFENNEEMKHKARR----------------------------DLSEEIQAP- 436

Query: 1534 NNTRPDDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCY 1355
                       VD +KLGE G+KER+YAEKF+ + E+E +K+ +  VLKY+EG+CWV  Y
Sbjct: 437  ----------PVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVVLKYVEGLCWVCRY 486

Query: 1354 YYQGVCSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLF 1175
            YYQGVCSWQWFYPYHYAPFASD   LD +EI F LGEPFKPFDQLMG LPAAS++ALP  
Sbjct: 487  YYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFKPFDQLMGTLPAASSNALPEE 546

Query: 1174 YRKLMTDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEE 995
            YRKLMTD SSPI  F+P DFE+DMNGKRFAWQ I KLPFI E +LLA+  K++ TL +EE
Sbjct: 547  YRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLERTLMEEE 606

Query: 994  KQRNSLGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYIS 815
            + RNS+  D L++H  HPL+ ++ S+       P     ++  KI+ + S GMNGY+++S
Sbjct: 607  QVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLP--VSERIALKIDTRASGGMNGYLWLS 664

Query: 814  DKPVWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPP 635
            ++ VW     SPI+ +  +  ++V+++ Y  P  H H+P PPEGVV+P   ++  DI   
Sbjct: 665  ERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRHIPEPPEGVVMPEKILKPTDIKLF 724

Query: 634  QPLWHEESAVR--GRVFFERP-VPKSISGSSLSQMSHRLV 524
              LWHE++  R  GR   ERP VP++++G  L + +HRLV
Sbjct: 725  PTLWHEDNGRRQQGR---ERPQVPRAVAGPVLGEAAHRLV 761


>ref|XP_006392535.1| hypothetical protein EUTSA_v10023239mg [Eutrema salsugineum]
            gi|557089041|gb|ESQ29821.1| hypothetical protein
            EUTSA_v10023239mg [Eutrema salsugineum]
          Length = 946

 Score =  526 bits (1354), Expect = e-146
 Identities = 281/574 (48%), Positives = 367/574 (63%), Gaps = 4/574 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE +      +K    G+          K    G      
Sbjct: 232  LDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFAADCPGKS---GSANAAS 288

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
            +I  I K+++QFLNIWVLR+YL ++L IPD   T + ER+IDDFV +C FVGNDFLPHMP
Sbjct: 289  DIP-IHKKKYQFLNIWVLREYLQYELAIPDTPFTINFERIIDDFVFLCFFVGNDFLPHMP 347

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM VY+KEF  MGGYLTDS EV L RV+HFIQ V  +E+ IF+KRT+++
Sbjct: 348  TLEIREGAINLLMHVYRKEFTAMGGYLTDSGEVLLNRVEHFIQAVAVNEDKIFQKRTRIK 407

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            +  +            N + KQ S +                      S++P     P D
Sbjct: 408  QSMDN-----------NEEMKQRSRR--------------------DPSEAP---PEPID 433

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
                 D IKLGE G+KER+YAEKF     +E E+I++  V KY+EG+CWV  YYYQGVCS
Sbjct: 434  -----DKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDLVQKYVEGLCWVCRYYYQGVCS 488

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMTD 1154
            WQWFYPYHYAPFASD  +L  LEI F +GEPFKPFDQLMG LPAAS++ALP  YRKLMTD
Sbjct: 489  WQWFYPYHYAPFASDLKNLSDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTD 548

Query: 1153 SSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSLG 974
             SSPIL FYP DFE+DMNGKRF+WQ I KLPFI+E  LLA   K+++TLT EE+QRNS+ 
Sbjct: 549  PSSPILKFYPADFEIDMNGKRFSWQGIAKLPFIEEKLLLAATRKLEETLTVEERQRNSVM 608

Query: 973  LDALFIHVSHPLAAKI---FSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPV 803
            LD L++H +HPL  ++   + F ++   H  LP       I+P  S  MNG+++ S++  
Sbjct: 609  LDLLYVHPAHPLGQRVMQYYQFYRQLAPHECLP-----WMIDPNSSQAMNGFLWFSERNG 663

Query: 802  WPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLW 623
            +  +  SP++D+  I  ++ ++V Y  P  H H+P PP G +IP   +   DI P  PLW
Sbjct: 664  FQTKVVSPVNDLPSIEQNRALNVTYLNPAKHSHIPEPPRGAIIPDKILTSADIKPFPPLW 723

Query: 622  HEESAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            HE+++ R R   +RP V  +I+G  L + +HRL+
Sbjct: 724  HEDNSNRRRQARDRPQVAGAIAGPMLGEAAHRLI 757


>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  526 bits (1354), Expect = e-146
 Identities = 279/571 (48%), Positives = 369/571 (64%), Gaps = 1/571 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE +      +K    G+   +  + +        +E  D
Sbjct: 229  LDADLIMLSLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRG-------IEVVD 281

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
            +   I K+++QFLNIWVLR+YL +DL I +P    + ERL+DDFV +C FVGNDFLPHMP
Sbjct: 282  DTP-IHKKKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMP 340

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM VY++EF  MGGYLTD+ EV L+RV+HFI+ V  +E+ IF+KRT++Q
Sbjct: 341  TLEIREGAINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQ 400

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            +  E   E     KR                              ++E ++P+       
Sbjct: 401  QALENNEEMKLRTKR----------------------------EASEEPRAPVE------ 426

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
                 D +KLGE G+KER+Y EKF  +  +E +K+R+  V+KY+EG+CWV  YYYQGVCS
Sbjct: 427  -----DKVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYVEGLCWVCRYYYQGVCS 481

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMTD 1154
            WQW+YP+HYAPFASD   L  LEI F LGEPFKPFDQLMG LPAASA +LP  YRKLMTD
Sbjct: 482  WQWYYPFHYAPFASDLKDLVDLEITFFLGEPFKPFDQLMGTLPAASASSLPENYRKLMTD 541

Query: 1153 SSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSLG 974
             SSPILDFYP DFE+DMNGKR+AWQ + KLPFI E +LLAE  K++ TLT EE+ RNS+ 
Sbjct: 542  QSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEEQVRNSVM 601

Query: 973  LDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVWPL 794
             D L++H  HPLA +I  +    ++ P  P A+V   I+   S GMNGY+++ ++  W  
Sbjct: 602  FDLLYVHAVHPLATQIIYYYHFYQSSP--PLARVIWPIDINASGGMNGYLWLCERNGWRS 659

Query: 793  EFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWHEE 614
            EF S I  ++ I +++V +V Y  P  H H+P PP GVV+P   +R  DI P   LWHE+
Sbjct: 660  EFPSSISGLQNIEHNQVFNVTYVNPPHHKHIPEPPMGVVMPEKVLRPFDIKPLPVLWHED 719

Query: 613  SAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            +  R +   ERP VP++ISG  L + +HRL+
Sbjct: 720  NGGRRQQGRERPQVPRAISGPLLGEAAHRLL 750


>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp. vesca]
          Length = 971

 Score =  525 bits (1351), Expect = e-146
 Identities = 274/573 (47%), Positives = 368/573 (64%), Gaps = 3/573 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE +      +K    G+   +  + +          G+D
Sbjct: 233  LDADLIMLALATHEVHFSILREVITLPSQQEKCFLCGQVGHLAAECRG---------GDD 283

Query: 2053 --NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPH 1880
              N+  I ++++QFL+IWVLR+YL ++L IP+P    + ER++DDFV MC FVGNDFLPH
Sbjct: 284  GANLTPIHQKKYQFLHIWVLREYLQYELDIPNPPFQLNFERIVDDFVFMCFFVGNDFLPH 343

Query: 1879 MPSLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQ 1700
            MP+LEI EGAI+LLM +Y++EF  MGGYLTD+ EV L+RV+ FIQ V  +E  IF+KR +
Sbjct: 344  MPTLEIREGAINLLMHIYRREFSAMGGYLTDAGEVLLDRVERFIQSVAVYERQIFQKRAR 403

Query: 1699 VQKEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRP 1520
            +Q+  E   ER  NR+                + +P P+                     
Sbjct: 404  IQQAFENNEERQRNRRES-------------CEELPAPVVEK------------------ 432

Query: 1519 DDAIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGV 1340
                 VVD +KLGE G+ ER+YAEKF+ +  +E E +++  VLKY+EG+CWV  YYYQGV
Sbjct: 433  -----VVDKVKLGEPGYTERYYAEKFQVSKPEEVETVKKDLVLKYVEGLCWVCRYYYQGV 487

Query: 1339 CSWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLM 1160
            CSWQW+YPYHYAPFASD  +LD LEI F LGEPFKPFDQLMG LPAAS  ALP  YR LM
Sbjct: 488  CSWQWYYPYHYAPFASDLENLDDLEITFFLGEPFKPFDQLMGTLPAASCSALPEKYRNLM 547

Query: 1159 TDSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNS 980
            TD SSPI +FYP DFE+DMNGKRFAWQ + KLPFI E +LLA+  K++ TLT+EE  RNS
Sbjct: 548  TDPSSPICNFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLLAQTRKLESTLTEEELARNS 607

Query: 979  LGLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVW 800
            + LD LF++ SHPLA+ I  + +     P  P  ++   I+   S GMNG++++S++  +
Sbjct: 608  VMLDLLFVYPSHPLASHITLYYQVYCQSP--PHVRLPWVIDTSLSGGMNGFLWLSERNGF 665

Query: 799  PLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWH 620
                 SP+     I +++V++V Y  P+   H+P PP GV++PR  V+  DI PP  LWH
Sbjct: 666  RNVIPSPVRGFPNIDHNQVLNVTYLLPVAQKHIPEPPRGVIMPRKVVKPMDIKPPPALWH 725

Query: 619  EESAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            E++  R     +RP +P +I+G  L + +HRLV
Sbjct: 726  EDNGPRRYQNRDRPQIPGAIAGPMLGEAAHRLV 758


>ref|XP_007208373.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
            gi|462404015|gb|EMJ09572.1| hypothetical protein
            PRUPE_ppa000881mg [Prunus persica]
          Length = 972

 Score =  525 bits (1351), Expect = e-146
 Identities = 279/573 (48%), Positives = 371/573 (64%), Gaps = 3/573 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE +      +K    G+   +  + + K    G V  E 
Sbjct: 233  LDADLIMLALATHEVHFSILREVITLPGQQEKCFLCGQVGHLAAECRGKLDDYGNVVDET 292

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
             I    K+++QFLNIWVLR+YL ++L IP+P    + ER++DDFV MC FVGNDFLPHMP
Sbjct: 293  PIH---KKKYQFLNIWVLREYLQYELEIPNPPFQINFERIVDDFVFMCFFVGNDFLPHMP 349

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM +Y++EF  MGGYLTD+ EV L+RV+HFIQ V   E  IF+KR ++Q
Sbjct: 350  TLEIREGAINLLMHIYRREFTAMGGYLTDAGEVLLDRVEHFIQSVAVFERQIFQKRVRIQ 409

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            +  E      +N +  N  ++++S +L      P P                        
Sbjct: 410  QAIE------NNEEMRNRSRRESSAEL------PAP------------------------ 433

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
               VVD +KLGE G+ ER+YAEKF+    +E + +++  VLKY+EG+CWV  YYYQGVCS
Sbjct: 434  ---VVDKVKLGEPGYTERYYAEKFQVTKPEEIDNVKKDLVLKYVEGLCWVCRYYYQGVCS 490

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMTD 1154
            WQW+YPYHYAPFASD   LD LEI F LGEPFKPFDQLMG LPAAS+ ALP  YR LMTD
Sbjct: 491  WQWYYPYHYAPFASDLKDLDELEITFFLGEPFKPFDQLMGTLPAASSSALPEKYRNLMTD 550

Query: 1153 SSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSLG 974
             SSPI +FYP DFE+DMNGKRFAWQ + KLPFI E +LLA+  +++ TLT+EE+ RNS+ 
Sbjct: 551  PSSPIYNFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLLAQTRRLESTLTEEEQARNSVM 610

Query: 973  LDALFIHVSHPLAAKIFSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKPVWPL 794
            LD L+++ SHPLAA++  +   +  +   P+ +    I+   S GMNGY+++S++     
Sbjct: 611  LDLLYVYPSHPLAAEMKLY--YQLYYQSAPQERFVWPIDTIASGGMNGYLWLSERNGVRC 668

Query: 793  EFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWHEE 614
               SP+     I  ++V++V Y  P  H H+P PP+GVV+P+  V+  DI P   LWHE+
Sbjct: 669  VIPSPVRGYPNIDYNQVLNVTYLNPAAHKHIPEPPQGVVMPKKVVKPMDIKPAPALWHED 728

Query: 613  SAVR--GRVFFERP-VPKSISGSSLSQMSHRLV 524
            +  R  GR   ERP VP +I+G  L + +HRLV
Sbjct: 729  NGRRQQGR---ERPQVPGAIAGPMLGEAAHRLV 758


>ref|XP_007030646.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma cacao]
            gi|508719251|gb|EOY11148.1| 5'-3' exoribonuclease 4
            isoform 2 [Theobroma cacao]
          Length = 869

 Score =  520 bits (1338), Expect = e-144
 Identities = 280/575 (48%), Positives = 367/575 (63%), Gaps = 5/575 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE +      +K    G+   +  +   K     +     
Sbjct: 122  LDADLIMLSLATHEVHFSILREVITLPGQQEKCFLCGQVGHLAAECHGKPDNGTEDRNAV 181

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
            +   I K+++QFLNIWVLR+YL +DL IP+P    + ER++DDFV +C FVGNDFLPHMP
Sbjct: 182  DDTPIHKKKYQFLNIWVLREYLQYDLEIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMP 241

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM VYK+EF  MGGYLTD+ EV L+RV+ FIQ V  HE+ IF+KRT++Q
Sbjct: 242  TLEIREGAINLLMQVYKREFSAMGGYLTDAGEVLLDRVECFIQSVAVHEDQIFQKRTRIQ 301

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            +  E   E++  + RG   +                           E+Q+P        
Sbjct: 302  QAFENN-EQMKLKARGESSE---------------------------EAQAP-------- 325

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDEREKIRRRAVLKYIEGICWVMCYYYQGVCS 1334
               VVD IKLGE G+KER+YAEKF  +   E E+++R  VLKY+EG+CWV  YYYQGVCS
Sbjct: 326  ---VVDKIKLGEPGYKERYYAEKFNVSNPVEIEEVKRDVVLKYVEGLCWVCRYYYQGVCS 382

Query: 1333 WQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMTD 1154
            WQWFYPYHYAPFASD   L  LEI F +GEPFKPFDQLMG LPAAS+ ALP  Y KLMTD
Sbjct: 383  WQWFYPYHYAPFASDLKDLSDLEITFFIGEPFKPFDQLMGTLPAASSGALPDRYGKLMTD 442

Query: 1153 SSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSLG 974
             SSPI  FYP DFE+DM+GKRFAWQ + KLPFI E +LLA   K++DTLT EE+ RNS+ 
Sbjct: 443  PSSPIYKFYPSDFEIDMHGKRFAWQGVVKLPFIDEKKLLAATRKLEDTLTVEEQFRNSVM 502

Query: 973  LDALFIHVSHPLAAKIFS----FCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKP 806
            LD L++H  HPLA+ +FS    +C+ +      P  +    I+   S GMNG++++S++ 
Sbjct: 503  LDLLYVHRLHPLASLVFSYYQIYCQLR------PHERFVWPIDTNTSGGMNGFLWLSERN 556

Query: 805  VWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPL 626
             W     SP+  +  I +++V++V Y  P  H H+P  PEGV+IP+  +   DI P   L
Sbjct: 557  GWQGVVPSPVKGLPYIESNQVLNVTYLNPSCHKHIPELPEGVMIPKKVLTPLDIKPLPVL 616

Query: 625  WHEESAVRGRVFFERP-VPKSISGSSLSQMSHRLV 524
            WHE++  R +   +RP VP +I G  L + +HRLV
Sbjct: 617  WHEDNGGRRQQGRDRPRVPGAIVGPQLGEAAHRLV 651


>ref|XP_004981451.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Setaria italica]
          Length = 1024

 Score =  518 bits (1335), Expect = e-144
 Identities = 297/697 (42%), Positives = 412/697 (59%), Gaps = 4/697 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIMLAL THE+HFSILRE +      +K    G+   +  + +       QV+   
Sbjct: 233  LDADLIMLALATHEVHFSILREVISMPGQQEKCFLCGQVGHLAAECRGPS----QVDSAV 288

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
             +  I K+++QFL+IWVLR+YL  DL I D     + ERLIDDFV MC FVGNDFLPHMP
Sbjct: 289  ELPPIHKKKYQFLHIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPHMP 348

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM++Y+ EF+ MGGYLTD  EV L+RV+HFIQ V  +E  IF+KR ++Q
Sbjct: 349  TLEIREGAINLLMSIYRAEFISMGGYLTDGGEVVLDRVEHFIQSVAFNEEQIFQKRARIQ 408

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            + RE   ER +  +R + ++ Q   K+ +S  I   +CS                     
Sbjct: 409  QARENNEER-NKIQRESTEENQYVDKVCFSHKISEYVCSVMSLMIVSMKIVCC------P 461

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDER-EKIRRRAVLKYIEGICWVMCYYYQGVC 1337
            + +    +KLGE G++ER+YAEKF+   E +  +++RR  V KY+EG+CWVM YYYQGVC
Sbjct: 462  SFSFYLQVKLGEPGYRERYYAEKFKEEAESKPIDQVRRDVVQKYVEGLCWVMRYYYQGVC 521

Query: 1336 SWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMT 1157
            SWQWFYPYHYAPFASD   L  LEI F LG+PFKPFDQLMG LPAAS++ALP +Y  LMT
Sbjct: 522  SWQWFYPYHYAPFASDLKDLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMT 581

Query: 1156 DSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSL 977
            D +SP+  FYP DFE+DMNGKRFAWQ + KLPFI E+RLLAE  K++DTLT+EEK RN+ 
Sbjct: 582  DPNSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDETRLLAETRKLEDTLTEEEKFRNTT 641

Query: 976  GLDALFIHVSHPLAAKIFSFCKRKKAHPKLPKA-KVKRKINPKFSDGMNGYIYISDKPVW 800
              D +++  +HPL A+I +F  R   H  LP+       I+P  S GMNG++ +S++  +
Sbjct: 642  MFDIIYVRETHPLTAQI-AFLYRMYNH--LPRTDPYVIPIDPAASGGMNGFLCLSERNWY 698

Query: 799  PLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPLWH 620
             +   SP+     I  ++V++  Y  P  H H+P PP GV++P   ++  D  P   LWH
Sbjct: 699  SITVTSPVKCFNGIAQNRVLNATYLNPQYHKHIPEPPVGVIVPGKILKPSDFKPFPVLWH 758

Query: 619  EESAVRGRVFFERP-VPKSISGSSLSQMSHRLVSQHYLVPKKKTEGPAELDGRITRNVSS 443
            E+++   R   ERP V  ++SGS L Q +HRLV     +      G  E+  R       
Sbjct: 759  EDNS--RRQARERPQVSGALSGSLLGQAAHRLVKNSLQIKSGSAAGLLEMPYRGAPYGPG 816

Query: 442  HQPNSQAMIHVKKMGDGKGIQMNGTKLGKRKQGDRSIEGQKLKTAEPAEVNGHISKVMVH 263
            ++P          +G  +G   N           RS+     +    A+ N    +++  
Sbjct: 817  NRPRPAG-----PLGYERGFVDN----PHHAHTSRSVPNSHPQFFGDAQANRQPMRILER 867

Query: 262  EKKKGNGEGIHVNGTKLGKRKQDGPSI-KNKKLKTAG 155
                 +  GIH + +KL     +GP + +N +++ +G
Sbjct: 868  PNSGSHEAGIHASMSKL--TIHEGPRLHQNNRMQNSG 902


>ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] gi|50400038|gb|AAT76426.1|
            putative 5'-3' exonuclease [Oryza sativa Japonica Group]
            gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa
            Japonica Group]
          Length = 988

 Score =  514 bits (1324), Expect = e-143
 Identities = 293/706 (41%), Positives = 401/706 (56%), Gaps = 6/706 (0%)
 Frame = -2

Query: 2233 LDADLIMLALTTHEIHFSILREDVRKAQANDKKRNFGKNSRVNQQEKNKELKLGQVEGED 2054
            LDADLIML+L THE+HFSILRE +     ++K    G+   +  + +      GQ +   
Sbjct: 233  LDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGS----GQADKTV 288

Query: 2053 NIDYISKQQFQFLNIWVLRDYLMHDLRIPDPAVTADLERLIDDFVLMCVFVGNDFLPHMP 1874
             +  I K+++QFLNIWVLR+YL  DL I DP    + ER++DDFV MC FVGNDFLPHMP
Sbjct: 289  ELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMP 348

Query: 1873 SLEISEGAIDLLMTVYKKEFVRMGGYLTDSSEVNLERVQHFIQVVGSHENAIFRKRTQVQ 1694
            +LEI EGAI+LLM +Y++EF  MGGYLTD  EV L+RV+HFIQ V  HE  IF+KR ++Q
Sbjct: 349  TLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQ 408

Query: 1693 KEREKIFERLSNRKRGNGKQKQNSGKLWYSDLIPTPICSTSQSSCAKESQSPINNTRPDD 1514
            K        + N +  N  Q +NS    Y                               
Sbjct: 409  KA-------IQNNEERNRVQTENSEDNQY------------------------------- 430

Query: 1513 AIAVVDNIKLGEEGWKERFYAEKFEANTEDER-EKIRRRAVLKYIEGICWVMCYYYQGVC 1337
                VD +KLGE G++ R+YAEKF+   E +  ++++R  V KY+EG+CWVM YYYQGVC
Sbjct: 431  ----VDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVC 486

Query: 1336 SWQWFYPYHYAPFASDFYHLDRLEIHFTLGEPFKPFDQLMGVLPAASAHALPLFYRKLMT 1157
            SWQWFYPYHYAPFASD   L  LEI F LG+PFKPFDQLMG LPAAS++ALP +Y  LM 
Sbjct: 487  SWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMN 546

Query: 1156 DSSSPILDFYPDDFELDMNGKRFAWQAICKLPFIKESRLLAEITKVQDTLTDEEKQRNSL 977
            D +SP+  FYP DFE+DMNGKRFAWQ I KLPFI E RLLAE  K+++TLTDEE+ RN  
Sbjct: 547  DPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRT 606

Query: 976  GLDALFIHVSHPLAAKI---FSFCKRKKAHPKLPKAKVKRKINPKFSDGMNGYIYISDKP 806
              D L++  +HPLAA+I   +  C +       P A     I+P  S GMNG++ +S++ 
Sbjct: 607  MFDILYVRETHPLAAQIAFLYQMCSQS------PNASYIIPIDPAASGGMNGFLCLSERN 660

Query: 805  VWPLEFHSPIDDMEIITNSKVISVFYKYPLIHPHVPRPPEGVVIPRMSVRKQDILPPQPL 626
             + +   SP+     I  ++V++  Y  P  H H+P PPEGV+IP   ++  D  P   L
Sbjct: 661  CYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKPFPIL 720

Query: 625  WHEESAVRGRVFFERP-VPKSISGSSLSQMSHRLVSQHYLVPKKKTEGPAELDGRITRNV 449
            WHE+++ R     ERP V  ++SGS L + +HRLV     +    + G  ++  R     
Sbjct: 721  WHEDNSRRQP--RERPQVSGALSGSVLGEAAHRLVKNSLQIKSGYSAGLLDMPYRGAPYG 778

Query: 448  SSHQPNSQAMIHVKKMGDGKGIQMNGTKLGKRKQGDRSIEGQKLKTAEPAEVNGHISKVM 269
              ++P     +         G +    +        RS+     +    A+ N    +++
Sbjct: 779  PGNRPRPAGPL---------GYERGFVENSYNGHMSRSVPNSHPQFFGDAQANRQNVRIL 829

Query: 268  VHEKKKGNGEGIHVNGTKLGKRKQDGPSI-KNKKLKTAGPSVTNGH 134
                 + N   IH   ++L    QDGP + +N +++ +G S    H
Sbjct: 830  ERPNYRNNDSAIHSGMSQL--TIQDGPRMHQNNRMQNSGFSPNQPH 873