BLASTX nr result
ID: Akebia24_contig00024408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00024408
(2680 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081355.1| RNA polymerase beta'' subunit (chloroplast) ... 1014 0.0
ref|YP_008081447.1| RNA polymerase beta'' subunit (chloroplast) ... 1011 0.0
gb|ADD31155.1| RNA polymerase beta'' subunit protein [Meliosma a... 1010 0.0
ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]... 1010 0.0
ref|YP_004564093.1| RNA polymerase beta' subunit [Nelumbo nucife... 1008 0.0
ref|YP_740555.1| RNA polymerase beta'' subunit [Platanus occiden... 995 0.0
ref|YP_001294174.1| RNA polymerase beta' subunit [Buxus microphy... 992 0.0
ref|YP_002836080.1| RNA polymerase beta'' subunit [Megaleranthis... 991 0.0
ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [... 990 0.0
ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) ... 989 0.0
ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwang... 988 0.0
ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia trip... 988 0.0
ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [... 988 0.0
ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|3... 988 0.0
ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) ... 988 0.0
gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magn... 987 0.0
ref|YP_740192.1| RNA polymerase beta' subunit [Liriodendron tuli... 987 0.0
ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [... 986 0.0
ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) ... 986 0.0
ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [... 986 0.0
>ref|YP_008081355.1| RNA polymerase beta'' subunit (chloroplast) [Tetracentron sinense]
gi|479279193|gb|AGJ72047.1| RNA polymerase beta'' subunit
(chloroplast) [Tetracentron sinense]
Length = 1378
Score = 1014 bits (2621), Expect(2) = 0.0
Identities = 504/559 (90%), Positives = 523/559 (93%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGMMTE IFIQTLIGRVLADDIYMG RCIA+RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGMMTERIFIQTLIGRVLADDIYMGPRCIAIRNQDIGIGLVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS LNFKE+VRKHIYSDS+GEMHWST+
Sbjct: 398 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRKHIYSDSKGEMHWSTD 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLWILSG P RSSIVPFSLHKDQDQMNV S S+ERRYISNL
Sbjct: 458 VYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIVPFSLHKDQDQMNVQSLSVERRYISNL 517
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTNDQV+HKLF DPSGKK RILDYS P+RIIC GHCNF YPAILHENSDL+AKRRRN
Sbjct: 518 SVTNDQVKHKLFSLDPSGKKGGRILDYSAPNRIICNGHCNFIYPAILHENSDLLAKRRRN 577
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ NQEREKEL+P SGISIEIPINGIFR NSILAYFDDPRYRR SSGITKYGTIE
Sbjct: 578 RFIIPFQSNQEREKELMPRSGISIEIPINGIFRRNSILAYFDDPRYRRKSSGITKYGTIE 637
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
V SIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEV+ILPGSSSIMVRNNSIIGVDT+I
Sbjct: 638 VHSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVYILPGSSSIMVRNNSIIGVDTRI 697
Query: 1058 TLNIKSRVGGLVRVERKKK 1002
LN +SRVGGLVRVERKK+
Sbjct: 698 ALNTRSRVGGLVRVERKKR 716
Score = 546 bits (1406), Expect(2) = 0.0
Identities = 273/329 (82%), Positives = 288/329 (87%), Gaps = 1/329 (0%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXN-WIYVQRITPTKKKYFVLVR 809
IFSG IHFPGETDKIS HSGILIPPGTG WIYVQRITPTKKKYFVLVR
Sbjct: 722 IFSGAIHFPGETDKISRHSGILIPPGTGKKNSKESKKKLKNWIYVQRITPTKKKYFVLVR 781
Query: 808 PVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 629
PV+TYEIADGINLA LFP+DLLQERDN+QL VVNYILYGNGKPI GISHTSIQLVRTCLV
Sbjct: 782 PVVTYEIADGINLARLFPQDLLQERDNLQLPVVNYILYGNGKPIGGISHTSIQLVRTCLV 841
Query: 628 LNWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANG 449
LNWD++K GSS EEVHASFV+VR N LIRDFIRMDLVKS ISYTGKRND +GSGLIP NG
Sbjct: 842 LNWDEDKKGSSIEEVHASFVEVRANGLIRDFIRMDLVKSPISYTGKRNDLSGSGLIPDNG 901
Query: 448 SDRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNN 269
SDR N+NPFYSK IQQ L+QH GTIRTLLNRN ECQSLIILSSSNC RMGPF G K +N
Sbjct: 902 SDRININPFYSKASIQQLLSQHPGTIRTLLNRNNECQSLIILSSSNCSRMGPFKGFKYHN 961
Query: 268 VTKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVL 89
VTKESIKRD L+PIR SLGPLGIVPKI NF SFYHLITHNQILVNKYLLLDNLK TFQV+
Sbjct: 962 VTKESIKRDPLIPIRKSLGPLGIVPKIANFYSFYHLITHNQILVNKYLLLDNLKQTFQVI 1021
Query: 88 KYYFMDENGRIYNPDSCSNIILNPFNLNW 2
KYYFMDENGRI++PD CSNIILNPF+LNW
Sbjct: 1022 KYYFMDENGRIFHPDPCSNIILNPFHLNW 1050
>ref|YP_008081447.1| RNA polymerase beta'' subunit (chloroplast) [Trochodendron
aralioides] gi|157690196|gb|ABV65785.1| RNA polymerase
beta'' subunit (chloroplast) [Trochodendron aralioides]
gi|479279286|gb|AGJ72139.1| RNA polymerase beta'' subunit
(chloroplast) [Trochodendron aralioides]
Length = 1381
Score = 1011 bits (2615), Expect(2) = 0.0
Identities = 501/559 (89%), Positives = 522/559 (93%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGIS SPRNGMMTE IFIQTL+GRVLADDIY+G RCIA+RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISASPRNGMMTERIFIQTLMGRVLADDIYIGPRCIAIRNQDIGIGLVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR A+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGIAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS LNFKE+VRKHIYSDS+GEMHWST+
Sbjct: 398 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRKHIYSDSKGEMHWSTD 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLWILSG P RSSIVPFSLHKDQDQMNV S S+ER YISNL
Sbjct: 458 VYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIVPFSLHKDQDQMNVQSLSVERTYISNL 517
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTNDQV+HKLF DPSGKK RILDYSGP+RIIC GHCNF YPAILHENSDL+AKRRRN
Sbjct: 518 SVTNDQVKHKLFSFDPSGKKGGRILDYSGPNRIICNGHCNFIYPAILHENSDLLAKRRRN 577
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ NQEREKEL+P SGISIEIPINGIFR NSILAYFDDPRYRR SSGITKYGTIE
Sbjct: 578 RFIIPFQSNQEREKELMPRSGISIEIPINGIFRRNSILAYFDDPRYRRKSSGITKYGTIE 637
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
V SIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEV+ILPGSSSIMVRNNSIIGVDT+I
Sbjct: 638 VHSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVYILPGSSSIMVRNNSIIGVDTRI 697
Query: 1058 TLNIKSRVGGLVRVERKKK 1002
TLN +SRVGGLVRVERKK+
Sbjct: 698 TLNTRSRVGGLVRVERKKR 716
Score = 535 bits (1378), Expect(2) = 0.0
Identities = 270/332 (81%), Positives = 286/332 (86%), Gaps = 4/332 (1%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXN-WIYVQRITPTKKKYFVLVR 809
IFSG IHFPGETDKIS HSGILIPPGTG WIYVQRITP KKKYFVLVR
Sbjct: 722 IFSGAIHFPGETDKISRHSGILIPPGTGKKNSKESKKKLKNWIYVQRITPIKKKYFVLVR 781
Query: 808 PVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 629
PV+TYEIADGINLA LFP+DLLQERDN+QLRVVNYILYGNGKPI GISHT IQLVRTCLV
Sbjct: 782 PVVTYEIADGINLARLFPQDLLQERDNLQLRVVNYILYGNGKPIGGISHTRIQLVRTCLV 841
Query: 628 LNWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANG 449
LNWDQ+K GSS EEVHASFV+VR N LIRDFIRMDLVKS ISYTGKRND +GSGLIP NG
Sbjct: 842 LNWDQDKKGSSIEEVHASFVEVRANGLIRDFIRMDLVKSPISYTGKRNDLSGSGLIPDNG 901
Query: 448 SDRTNLNPF---YSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLK 278
SDR N+NPF YSK IQQSL+QH+GTIRTLLNRN ECQSLIILSSSNC RMGPF G K
Sbjct: 902 SDRININPFYSIYSKASIQQSLSQHQGTIRTLLNRNNECQSLIILSSSNCSRMGPFKGFK 961
Query: 277 NNNVTKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTF 98
+NVTKESIKRD L+PIR SLGPLG V KI NF SFYHLITHNQILVNKYLLLDNLK TF
Sbjct: 962 YHNVTKESIKRDPLIPIRKSLGPLGTVHKIANFYSFYHLITHNQILVNKYLLLDNLKQTF 1021
Query: 97 QVLKYYFMDENGRIYNPDSCSNIILNPFNLNW 2
Q++KYY MDENGRI++PD CSNIILNPF+LNW
Sbjct: 1022 QIIKYYLMDENGRIFHPDPCSNIILNPFHLNW 1053
>gb|ADD31155.1| RNA polymerase beta'' subunit protein [Meliosma aff. cuneifolia Moore
333]
Length = 1377
Score = 1010 bits (2612), Expect(2) = 0.0
Identities = 503/560 (89%), Positives = 522/560 (93%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGMMTE IFIQTLIGRVLADDIYMG RCIA+RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGMMTERIFIQTLIGRVLADDIYMGPRCIAIRNQDIGIGLVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS LNFKERVRKHIYSDSEGEMHWST+
Sbjct: 398 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRKHIYSDSEGEMHWSTD 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLWILSG P RSSI PFSLHKDQDQ+N++S S+ERR ISNL
Sbjct: 458 VYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIAPFSLHKDQDQINLHSLSVERRSISNL 517
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTNDQVRHKLF SD SGKK RILDYSGPDRIIC HCNF YP LHENSDL+AKRRRN
Sbjct: 518 SVTNDQVRHKLFSSDLSGKKRGRILDYSGPDRIICNDHCNFRYPTTLHENSDLLAKRRRN 577
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ NQEREKEL+ CSGISIEIPING+FR NSILAYFDDPRYRRNSSGITKYGTIE
Sbjct: 578 RFIIPFQSNQEREKELMLCSGISIEIPINGLFRRNSILAYFDDPRYRRNSSGITKYGTIE 637
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
V SI+KKEDLIEYR KEFR K Q+K+DRFFFIPEEVHILPGSSSIMV+NNSIIGVDT+I
Sbjct: 638 VHSILKKEDLIEYRRVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVQNNSIIGVDTRI 697
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
TLN +SRVGGLVRVERKKKK
Sbjct: 698 TLNTRSRVGGLVRVERKKKK 717
Score = 540 bits (1392), Expect(2) = 0.0
Identities = 274/328 (83%), Positives = 285/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHFPGETDKIS HSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 722 IFSGDIHFPGETDKISRHSGILIPPGTKKKNSKESKKWKNWIYVQRITPTKKKYFVLVRP 781
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINLATLFP+DLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL
Sbjct: 782 VVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 841
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ+K SS EEVHAS V+VR DLIRDFIRMDLVK ISYT KRND AGSGLIP NGS
Sbjct: 842 NWDQDKKDSSIEEVHASCVEVRAIDLIRDFIRMDLVKPPISYTVKRNDPAGSGLIPDNGS 901
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+NPFYSK RIQQSL+QH+GTIRTLLNRNKEC SLIILSSSNC RMG FNGLK +NV
Sbjct: 902 DRTNINPFYSKARIQQSLSQHQGTIRTLLNRNKECHSLIILSSSNCFRMGLFNGLKYHNV 961
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESI++DSL+PIRNSLGPLG VPKI NFD YHLITHNQIL NKYLLLDN K FQVLK
Sbjct: 962 TKESIQKDSLIPIRNSLGPLGTVPKIANFDLSYHLITHNQILRNKYLLLDNFKKIFQVLK 1021
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENG I NPD SNIILNP NLNW
Sbjct: 1022 YYLMDENGGINNPDPSSNIILNPVNLNW 1049
>ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]
gi|224474124|gb|ACN49313.1| RNA polymerase beta' subunit
[Nelumbo lutea] gi|383286882|gb|AFH01531.1| RNA
polymerase beta'' subunit (chloroplast) [Nelumbo lutea]
Length = 1390
Score = 1010 bits (2611), Expect(2) = 0.0
Identities = 504/561 (89%), Positives = 525/561 (93%), Gaps = 1/561 (0%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGT+RGISVSPRNGMMTE IFIQTL+GRVLADDIYMG RCIA+RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTVRGISVSPRNGMMTERIFIQTLMGRVLADDIYMGPRCIAIRNQDIGIGLVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+ VRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGTAEQVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS LNFKERVRKHIYSDSEGEMHWST+
Sbjct: 398 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRKHIYSDSEGEMHWSTD 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLWILSG P RS+IVPFSLHKDQDQM+V+S S+E RYISNL
Sbjct: 458 VYHAPEYTYGNVHLLPKTSHLWILSGSPCRSNIVPFSLHKDQDQMSVHSLSVEGRYISNL 517
Query: 1598 SVTNDQVRHKLFRSDPSG-KKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRR 1422
SVTNDQVRHKLF SDPS KK +RILD+SGPDRIIC GHCNF YPAILHENSDL+AKRRR
Sbjct: 518 SVTNDQVRHKLFSSDPSSCKKGERILDFSGPDRIICNGHCNFIYPAILHENSDLLAKRRR 577
Query: 1421 NRFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTI 1242
NRFIIPFQ NQEREKEL+P +GISIEIPINGIFR NSILAYFDDPRYRRNSSGITKYGTI
Sbjct: 578 NRFIIPFQSNQEREKELMPRAGISIEIPINGIFRRNSILAYFDDPRYRRNSSGITKYGTI 637
Query: 1241 EVDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQ 1062
EV SIVKKEDLIEYR KEFR K Q K+DRFFFIPEEVHILPGSSSI+VRNNSIIGVDT+
Sbjct: 638 EVHSIVKKEDLIEYRRAKEFRPKYQKKVDRFFFIPEEVHILPGSSSILVRNNSIIGVDTR 697
Query: 1061 ITLNIKSRVGGLVRVERKKKK 999
ITLN +SRVGGLVRVERKKKK
Sbjct: 698 ITLNTRSRVGGLVRVERKKKK 718
Score = 539 bits (1389), Expect(2) = 0.0
Identities = 273/332 (82%), Positives = 288/332 (86%), Gaps = 4/332 (1%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXN-WIYVQRITPTKKKYFVLVR 809
IFSGDIHFPGETDKIS HSGILIPPG WIY+QRITPTKKK+FVLVR
Sbjct: 723 IFSGDIHFPGETDKISRHSGILIPPGAEKKNSKESKTKLKNWIYIQRITPTKKKFFVLVR 782
Query: 808 PVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 629
PV+TYEIADGINLATLFP+DLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV
Sbjct: 783 PVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 842
Query: 628 LNWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANG 449
LNWDQ+K GSS EEVHAS V+VR NDLIRDFIRMDL KS ISY GKRND AGSGLI N
Sbjct: 843 LNWDQDKKGSSIEEVHASLVEVRANDLIRDFIRMDLAKSPISYIGKRNDPAGSGLISDNR 902
Query: 448 SDRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLR--MGPFNGLKN 275
SDRTN NPFYSK RIQQSL+QH+GTIRTLLNRNKECQSLIILSSSNC R +GPFNGLK
Sbjct: 903 SDRTNRNPFYSKARIQQSLSQHQGTIRTLLNRNKECQSLIILSSSNCSRIGIGPFNGLKY 962
Query: 274 NNVTKESIKRDSLLPIRNSLGPLGIVPKITNF-DSFYHLITHNQILVNKYLLLDNLKHTF 98
+NVTKESIKRD L+ IRNS GPLG VPKI NF S+YHLITHNQIL+NKYLLLDNLK TF
Sbjct: 963 HNVTKESIKRDPLISIRNSFGPLGTVPKIANFYSSYYHLITHNQILINKYLLLDNLKQTF 1022
Query: 97 QVLKYYFMDENGRIYNPDSCSNIILNPFNLNW 2
QVLKYY +DENGRI+NPD CSNII NPFNLNW
Sbjct: 1023 QVLKYYLIDENGRIFNPDPCSNIIFNPFNLNW 1054
>ref|YP_004564093.1| RNA polymerase beta' subunit [Nelumbo nucifera]
gi|224474212|gb|ACN49398.1| RNA polymerase beta' subunit
[Nelumbo nucifera] gi|290489544|gb|ADD31156.1| RNA
polymerase beta'' subunit protein [Nelumbo nucifera]
gi|383286787|gb|AFH01437.1| RNA polymerase beta'' subunit
(chloroplast) [Nelumbo nucifera]
gi|519666902|gb|AGO98514.1| RNA polymerase beta' subunit
(chloroplast) [Nelumbo nucifera]
Length = 1390
Score = 1008 bits (2605), Expect(2) = 0.0
Identities = 503/561 (89%), Positives = 524/561 (93%), Gaps = 1/561 (0%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGT+RGISVSPRNGMMTE IFIQTL+GRVLADDIYMG RCIA+RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTVRGISVSPRNGMMTERIFIQTLMGRVLADDIYMGPRCIAIRNQDIGIGLVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+ VRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGTAEQVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAG S LNFKERVRKHIYSDSEGEMHWST+
Sbjct: 398 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGISTLNFKERVRKHIYSDSEGEMHWSTD 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLWILSG P RS+IVPFSLHKDQDQM+V+S S+E RYISNL
Sbjct: 458 VYHAPEYTYGNVHLLPKTSHLWILSGSPCRSNIVPFSLHKDQDQMSVHSLSVEGRYISNL 517
Query: 1598 SVTNDQVRHKLFRSDPSG-KKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRR 1422
SVTNDQVRHKLF SDPS KK +RILD+SGPDRIIC GHCNF YPAILHENSDL+AKRRR
Sbjct: 518 SVTNDQVRHKLFSSDPSSCKKGERILDFSGPDRIICNGHCNFIYPAILHENSDLLAKRRR 577
Query: 1421 NRFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTI 1242
NRFIIPFQ NQEREKEL+P +GISIEIPINGIFR NSILAYFDDPRYRRNSSGITKYGTI
Sbjct: 578 NRFIIPFQSNQEREKELMPRAGISIEIPINGIFRRNSILAYFDDPRYRRNSSGITKYGTI 637
Query: 1241 EVDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQ 1062
EV SIVKKEDLIEYR KEFR K Q K+DRFFFIPEEVHILPGSSSI+VRNNSIIGVDT+
Sbjct: 638 EVHSIVKKEDLIEYRRAKEFRPKYQKKVDRFFFIPEEVHILPGSSSILVRNNSIIGVDTR 697
Query: 1061 ITLNIKSRVGGLVRVERKKKK 999
ITLN +SRVGGLVRVERKKKK
Sbjct: 698 ITLNTRSRVGGLVRVERKKKK 718
Score = 539 bits (1389), Expect(2) = 0.0
Identities = 273/332 (82%), Positives = 288/332 (86%), Gaps = 4/332 (1%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXN-WIYVQRITPTKKKYFVLVR 809
IFSGDIHFPGETDKIS HSGILIPPG WIY+QRITPTKKK+FVLVR
Sbjct: 723 IFSGDIHFPGETDKISRHSGILIPPGAEKKNSKESKTKLKNWIYIQRITPTKKKFFVLVR 782
Query: 808 PVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 629
PV+TYEIADGINLATLFP+DLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV
Sbjct: 783 PVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 842
Query: 628 LNWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANG 449
LNWDQ+K GSS EEVHAS V+VR NDLIRDFIRMDL KS ISY GKRND AGSGLI N
Sbjct: 843 LNWDQDKKGSSIEEVHASLVEVRANDLIRDFIRMDLAKSPISYIGKRNDPAGSGLISDNR 902
Query: 448 SDRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLR--MGPFNGLKN 275
SDRTN NPFYSK RIQQSL+QH+GTIRTLLNRNKECQSLIILSSSNC R +GPFNGLK
Sbjct: 903 SDRTNRNPFYSKARIQQSLSQHQGTIRTLLNRNKECQSLIILSSSNCSRIGIGPFNGLKY 962
Query: 274 NNVTKESIKRDSLLPIRNSLGPLGIVPKITNF-DSFYHLITHNQILVNKYLLLDNLKHTF 98
+NVTKESIKRD L+ IRNS GPLG VPKI NF S+YHLITHNQIL+NKYLLLDNLK TF
Sbjct: 963 HNVTKESIKRDPLISIRNSFGPLGTVPKIANFYSSYYHLITHNQILINKYLLLDNLKQTF 1022
Query: 97 QVLKYYFMDENGRIYNPDSCSNIILNPFNLNW 2
QVLKYY +DENGRI+NPD CSNII NPFNLNW
Sbjct: 1023 QVLKYYLIDENGRIFNPDPCSNIIFNPFNLNW 1054
>ref|YP_740555.1| RNA polymerase beta'' subunit [Platanus occidentalis]
gi|122166045|sp|Q09G56.1|RPOC2_PLAOC RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|114054374|gb|ABI49768.1| RNA polymerase beta'' subunit
[Platanus occidentalis]
Length = 1387
Score = 995 bits (2573), Expect(2) = 0.0
Identities = 496/560 (88%), Positives = 517/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGT++GISVSPRNGM+TE I IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTLQGISVSPRNGMITERILIQTLIGRVLADDIYMGPRCIAARNQDIGIGLVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITF AQPIS+RTPFTCRS SWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFGAQPISIRTPFTCRSISWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS LNFKERVRKHIYSDSEGEMHWSTN
Sbjct: 398 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRKHIYSDSEGEMHWSTN 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTY +VHLLPKTSHLWILSG YRSSIVP SLHKDQDQMNV+S S+ERRYISN
Sbjct: 458 VYHAPEYTYSHVHLLPKTSHLWILSGGSYRSSIVPLSLHKDQDQMNVHSLSVERRYISNF 517
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTNDQVRHKLF S PS KK +RILDYSG DRIIC GHCNF YP+ILHENSDL+AKRRRN
Sbjct: 518 SVTNDQVRHKLFNSYPSSKKGERILDYSGTDRIICNGHCNFIYPSILHENSDLLAKRRRN 577
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ NQEREKEL+ S ISIEIPINGIFR NSILAYFDDPRYRRN+SGITKYGTIE
Sbjct: 578 RFIIPFQSNQEREKELMSRSDISIEIPINGIFRRNSILAYFDDPRYRRNNSGITKYGTIE 637
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
V +IVKKEDLIEYR KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 638 VHAIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 697
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
TLN +SRVGGLVRVERKKK+
Sbjct: 698 TLNARSRVGGLVRVERKKKR 717
Score = 539 bits (1389), Expect(2) = 0.0
Identities = 270/330 (81%), Positives = 289/330 (87%), Gaps = 2/330 (0%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXN-WIYVQRITPTKKKYFVLVR 809
IFSGDIHFPGETDKIS HSGILIPPGTG WIYVQRITP KKKYFV VR
Sbjct: 722 IFSGDIHFPGETDKISRHSGILIPPGTGKKNSKKSKKKLQNWIYVQRITPIKKKYFVFVR 781
Query: 808 PVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 629
PV+TYEIADGINLATLFP+DLLQERDNVQLRVVNYILY NGKPIRGISHT+IQLVRTCLV
Sbjct: 782 PVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYANGKPIRGISHTTIQLVRTCLV 841
Query: 628 LNWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANG 449
LNWDQ KNGSS +EVHASFV+VR NDLI+DFIRMDLVKS IS+TGKRND AGSGLIP NG
Sbjct: 842 LNWDQGKNGSSIKEVHASFVEVRANDLIQDFIRMDLVKSTISHTGKRNDPAGSGLIPDNG 901
Query: 448 SDRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNN 269
SDRTN+NPFYSK RIQQSL++H+GT+R+LLNRNKECQSLIILSSSNC +MGP N LK +N
Sbjct: 902 SDRTNINPFYSKARIQQSLSRHQGTLRSLLNRNKECQSLIILSSSNCSQMGPLNTLKYHN 961
Query: 268 VTKESIKRDSLLPIRNSLGPLGIVPKITNF-DSFYHLITHNQILVNKYLLLDNLKHTFQV 92
VTKESIKRD +PIRNSLGPLG VPKITNF S+Y LITHNQILV+KYLLL NLK T QV
Sbjct: 962 VTKESIKRDPPIPIRNSLGPLGTVPKITNFYSSYYQLITHNQILVSKYLLLANLKQTLQV 1021
Query: 91 LKYYFMDENGRIYNPDSCSNIILNPFNLNW 2
KYY MDENG+IYNPD CSNII NPFNLNW
Sbjct: 1022 FKYYLMDENGKIYNPDPCSNIIFNPFNLNW 1051
>ref|YP_001294174.1| RNA polymerase beta' subunit [Buxus microphylla]
gi|212277016|sp|A6MM26.1|RPOC2_BUXMI RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|146762275|gb|ABQ45239.1| RNA polymerase beta' subunit
[Buxus microphylla]
Length = 1391
Score = 992 bits (2564), Expect(2) = 0.0
Identities = 494/559 (88%), Positives = 513/559 (91%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGI V+ RNGMMTE IFIQTLIGRVLADDIYMG RCIA RNQD+GI LVN
Sbjct: 218 VVRRTDCGTIRGIYVTSRNGMMTERIFIQTLIGRVLADDIYMGPRCIATRNQDVGIELVN 277
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 278 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 337
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAP NGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 338 TLRTFHTGGVFTGGTAEHVRAPFNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 397
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIP KSFLLVQN+QYVESEQVIAEIRA TS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 398 IIHNVNIPQKSFLLVQNNQYVESEQVIAEIRAETSTFNFKERVRKHIYSDSEGEMHWSTD 457
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLW+LSG P RS IVPFSLHKDQDQMNV+S S ERRYISNL
Sbjct: 458 VYHAPEYTYGNVHLLPKTSHLWVLSGGPCRSRIVPFSLHKDQDQMNVHSLSAERRYISNL 517
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
S TNDQVRHKLF SDPSGK+ ILDYSGP+RIIC GH NF YP ILHENSDL+AKRRRN
Sbjct: 518 SATNDQVRHKLFSSDPSGKRGGSILDYSGPNRIICNGHLNFIYPTILHENSDLLAKRRRN 577
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFI+P Q NQEREKEL+PCSGISIEIPINGIFR NSILAYFDDP YRR SSGITKYGTIE
Sbjct: 578 RFILPLQSNQEREKELMPCSGISIEIPINGIFRRNSILAYFDDPLYRRKSSGITKYGTIE 637
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
V SIVKKEDLIEYRG KEFRSK Q+K+DRFFFIPEEVHILPGSS IMVRNNSIIGVDT+I
Sbjct: 638 VHSIVKKEDLIEYRGAKEFRSKYQMKVDRFFFIPEEVHILPGSSYIMVRNNSIIGVDTRI 697
Query: 1058 TLNIKSRVGGLVRVERKKK 1002
TLNI+SRVGGLVRVERKKK
Sbjct: 698 TLNIRSRVGGLVRVERKKK 716
Score = 518 bits (1335), Expect(2) = 0.0
Identities = 265/332 (79%), Positives = 280/332 (84%), Gaps = 4/332 (1%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXN-WIYVQRITPTKKKYFVLVR 809
IFSGDIHFPGETDKIS HSGILIPPGT WIYVQRITPTKKKYFVLVR
Sbjct: 722 IFSGDIHFPGETDKISRHSGILIPPGTEKKKSKESKKKLKNWIYVQRITPTKKKYFVLVR 781
Query: 808 PVITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLV 629
PV+TYEIADGINL TLFP+DLLQERD+VQLRVVNYILY NGKPIRGIS TSIQLVRTCLV
Sbjct: 782 PVVTYEIADGINLVTLFPQDLLQERDDVQLRVVNYILYENGKPIRGISDTSIQLVRTCLV 841
Query: 628 LNWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANG 449
LN DQ KNGSS EE+HASFV+VR N LIR F+RMDLVKS ISY KRND + SGLIP NG
Sbjct: 842 LNCDQYKNGSSMEEIHASFVEVRTNGLIRYFLRMDLVKSPISYIVKRNDPSSSGLIPDNG 901
Query: 448 SDRTNLNPFYS---KTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLK 278
SDR N+NPFYS K RIQQSL+QH+GTIRTLLNRNKECQSLIILSSSNC RM PFNGLK
Sbjct: 902 SDRNNINPFYSIYYKARIQQSLSQHQGTIRTLLNRNKECQSLIILSSSNCSRMHPFNGLK 961
Query: 277 NNNVTKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTF 98
+NVTKES K D L+PI+N LGPLG VPKI NF SFYHLITHNQILVNKYL+L+NLK F
Sbjct: 962 YHNVTKESSKGDPLIPIKNWLGPLGTVPKIANFYSFYHLITHNQILVNKYLILNNLKQIF 1021
Query: 97 QVLKYYFMDENGRIYNPDSCSNIILNPFNLNW 2
QVLKYY MDENGRIYNPD C NII NPFN NW
Sbjct: 1022 QVLKYYLMDENGRIYNPDRCRNIIFNPFNFNW 1053
>ref|YP_002836080.1| RNA polymerase beta'' subunit [Megaleranthis saniculifolia]
gi|226933872|gb|ACO92005.1| RNA polymerase beta'' subunit
[Megaleranthis saniculifolia]
Length = 1383
Score = 991 bits (2563), Expect(2) = 0.0
Identities = 497/560 (88%), Positives = 519/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 154 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 213
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGT+RGISVSPRNGM+TE IFIQTLIGRVLADDIYMGSRCIA+RNQDIGIGLVN
Sbjct: 214 VVRRTDCGTVRGISVSPRNGMITERIFIQTLIGRVLADDIYMGSRCIAIRNQDIGIGLVN 273
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQPIS+RTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 274 RFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 333
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAP NGKIKFNEDLVHPTRTRHG+PAFLCYIDLYV +E QD
Sbjct: 334 TLRTFHTGGVFTGGTAEHVRAPDNGKIKFNEDLVHPTRTRHGYPAFLCYIDLYVTIEGQD 393
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSF+LV+NDQYVESEQVIAEIRA S LNFKERVRKHIYSDSEGEMHWST
Sbjct: 394 ILHNVNIPPKSFILVKNDQYVESEQVIAEIRAEASTLNFKERVRKHIYSDSEGEMHWSTA 453
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEYTYGNVHLLPKTSHLWILSG PYRSSIVPFSLHKDQDQ+N++S S ER+YISNL
Sbjct: 454 VYHAPEYTYGNVHLLPKTSHLWILSGVPYRSSIVPFSLHKDQDQINIHSLSSERKYISNL 513
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTNDQVRHKLFRSDPSGKK +R+L YS PDRII GHCNF YPAIL +NSDL+AKRRRN
Sbjct: 514 SVTNDQVRHKLFRSDPSGKKRERVLYYSEPDRIIWNGHCNFIYPAILDDNSDLLAKRRRN 573
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ NQ EKE IP SGISIEIPING+FR NSILAYFDDPRYRR SSGITKYGTIE
Sbjct: 574 RFIIPFQSNQ--EKEPIPRSGISIEIPINGLFRRNSILAYFDDPRYRRKSSGITKYGTIE 631
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYR TKEFR K Q+KIDRFFFIPEEVHILPGSSSIMVRNNSIIGV T+I
Sbjct: 632 VDSIVKKEDLIEYRRTKEFRPKYQMKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVATRI 691
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
T NI+SRVGGLVRVE+KKKK
Sbjct: 692 TFNIRSRVGGLVRVEKKKKK 711
Score = 524 bits (1349), Expect(2) = 0.0
Identities = 267/332 (80%), Positives = 287/332 (86%), Gaps = 4/332 (1%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDI+FPGETDKISWHSGILIPPGT NWIYVQR+TPTKKKYFVLVRP
Sbjct: 716 IFSGDIYFPGETDKISWHSGILIPPGTVKKNSKESKTLKNWIYVQRVTPTKKKYFVLVRP 775
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYE ADGINLATLFP+D LQERDNVQLRVVNYILYGNGKPIRGISHT+IQL RTCLVL
Sbjct: 776 VVTYETADGINLATLFPQDPLQERDNVQLRVVNYILYGNGKPIRGISHTNIQLARTCLVL 835
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ+K GSS EEVHASFV+VR+NDLIRDFIR+DLVK ISYT KRND AGSGLI ANGS
Sbjct: 836 NWDQDKKGSSIEEVHASFVEVRVNDLIRDFIRIDLVKLPISYTRKRNDLAGSGLISANGS 895
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLK--NN 272
DRTNLNPFYSK RI+Q L +H+GTIRTLLNRNKECQSLI LSSSNC R+G FNGLK NN
Sbjct: 896 DRTNLNPFYSKARIKQLLIRHQGTIRTLLNRNKECQSLITLSSSNCFRIGLFNGLKYNNN 955
Query: 271 NVTKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQV 92
N+TK+S K D LLPIRN LGPLGIVPKIT+F SFY+LITHNQILVNK+ L+DNLK TFQV
Sbjct: 956 NMTKKSKKGDPLLPIRNLLGPLGIVPKITHFFSFYYLITHNQILVNKHSLIDNLKQTFQV 1015
Query: 91 --LKYYFMDENGRIYNPDSCSNIILNPFNLNW 2
LKYY MDENG IYN D CSN+ILN FN NW
Sbjct: 1016 LKLKYYLMDENGIIYNLDPCSNMILNLFNWNW 1047
>ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [Magnolia pyramidata]
Length = 1382
Score = 990 bits (2560), Expect(2) = 0.0
Identities = 500/560 (89%), Positives = 516/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKILIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 525 bits (1353), Expect(2) = 0.0
Identities = 266/328 (81%), Positives = 285/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis]
gi|372862411|gb|AEX98492.1| RNA polymerase beta subunit-2
(chloroplast) [Magnolia officinalis]
Length = 1382
Score = 989 bits (2557), Expect(2) = 0.0
Identities = 499/560 (89%), Positives = 516/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKILIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKK+
Sbjct: 697 ALNTRSRVGGLVRVERKKKR 716
Score = 524 bits (1350), Expect(2) = 0.0
Identities = 264/328 (80%), Positives = 283/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL T FP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFN K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNDSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG V KI NF S Y+LITHNQI +NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVSKIANFYSSYYLITHNQIFLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD CSNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPCSNIIFNPFDLNW 1046
>ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwangsiensis]
gi|302424170|gb|ADL39046.1| RNA polymerase beta' subunit
[Magnolia kwangsiensis]
Length = 1382
Score = 988 bits (2555), Expect(2) = 0.0
Identities = 498/560 (88%), Positives = 516/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I IQTLIGRVLADD+YMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKILIQTLIGRVLADDLYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKE+VRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKEKVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 522 bits (1345), Expect(2) = 0.0
Identities = 264/328 (80%), Positives = 284/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HT IQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTGIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRN+ECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNQECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia tripetala]
gi|608608394|gb|AHW51948.1| RNA polymerase beta'' subunit
[Magnolia tripetala]
Length = 1382
Score = 988 bits (2554), Expect(2) = 0.0
Identities = 499/560 (89%), Positives = 515/560 (91%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKILIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+S GITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSLGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 521 bits (1342), Expect(2) = 0.0
Identities = 263/328 (80%), Positives = 283/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL T FP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG + KI NF S Y+LITHNQI +NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTLSKIANFYSSYYLITHNQIFLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sprengeri]
Length = 1382
Score = 988 bits (2554), Expect(2) = 0.0
Identities = 498/560 (88%), Positives = 517/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I+IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKIWIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMN++S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNLHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK + ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGQGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 526 bits (1354), Expect(2) = 0.0
Identities = 267/328 (81%), Positives = 285/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIRMDLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKES K D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESSKEDPVIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNIILNPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIILNPFDLNW 1046
>ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|343887529|gb|AEM65208.1|
RpoC2 [Magnolia denudata]
Length = 1382
Score = 988 bits (2554), Expect(2) = 0.0
Identities = 498/560 (88%), Positives = 517/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I+IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKIWIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMN++S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNLHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK + ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGQGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 524 bits (1350), Expect(2) = 0.0
Identities = 266/328 (81%), Positives = 284/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIRMDLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKES K D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESSKEDPVIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis
subsp. biloba] gi|372862494|gb|AEX98574.1| RNA polymerase
beta subunit-2 (chloroplast) [Magnolia officinalis subsp.
biloba] gi|372862579|gb|AEX98658.1| RNA polymerase beta
subunit-2 (chloroplast) [Magnolia officinalis subsp.
biloba] gi|372862664|gb|AEX98742.1| RNA polymerase beta
subunit-2 (chloroplast) [Magnolia officinalis subsp.
biloba]
Length = 1382
Score = 988 bits (2553), Expect(2) = 0.0
Identities = 498/560 (88%), Positives = 516/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSP+NGM TE I IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPQNGM-TEKILIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKK+
Sbjct: 697 ALNTRSRVGGLVRVERKKKR 716
Score = 520 bits (1338), Expect(2) = 0.0
Identities = 263/328 (80%), Positives = 282/328 (85%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL T FP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFN K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNDSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG V KI NF S Y+LITHNQI +NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVSKIANFYSSYYLITHNQIFLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia denudata]
Length = 1382
Score = 987 bits (2551), Expect(2) = 0.0
Identities = 497/560 (88%), Positives = 517/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I+IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKIWIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMN++S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNLHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK + ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGQGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKK+
Sbjct: 697 ALNTRSRVGGLVRVERKKKR 716
Score = 524 bits (1350), Expect(2) = 0.0
Identities = 266/328 (81%), Positives = 284/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIRMDLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKES K D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESSKEDPVIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>ref|YP_740192.1| RNA polymerase beta' subunit [Liriodendron tulipifera]
gi|122239950|sp|Q0G9M9.1|RPOC2_LIRTU RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|113200984|gb|ABI32499.1| RNA polymerase beta' subunit
[Liriodendron tulipifera]
Length = 1382
Score = 987 bits (2551), Expect(2) = 0.0
Identities = 496/560 (88%), Positives = 517/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKILIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNE LVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNECLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
I+HNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 IIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIVPFSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVPFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPSGKK +RILDYSGPDRI+ GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSGKKKERILDYSGPDRIVSNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R ++ILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRDTILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSS IMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 526 bits (1354), Expect(2) = 0.0
Identities = 265/328 (80%), Positives = 286/328 (87%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHFPGETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKR+D+ GSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGTNDLIRDFIRIDLVKSPISYIGKRDDTTGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG VPKI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVPKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNP+ SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPNLHSNIIFNPFDLNW 1046
>ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [Magnolia dealbata]
Length = 1382
Score = 986 bits (2550), Expect(2) = 0.0
Identities = 497/560 (88%), Positives = 516/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCG+IRGISVSPRNGM TE I+IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGSIRGISVSPRNGM-TEKIWIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPA+LHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAVLHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R SILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRKSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 526 bits (1356), Expect(2) = 0.0
Identities = 266/328 (81%), Positives = 286/328 (87%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASF++V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFIEVGANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNIILNPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIILNPFDLNW 1046
>ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia grandiflora]
gi|372862833|gb|AEX98909.1| RNA polymerase beta subunit-2
(chloroplast) [Magnolia grandiflora]
gi|372863003|gb|AEX99077.1| RNA polymerase beta subunit-2
(chloroplast) [Magnolia grandiflora]
Length = 1382
Score = 986 bits (2549), Expect(2) = 0.0
Identities = 497/560 (88%), Positives = 515/560 (91%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I+IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKIWIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKER RKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERARKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMNV+S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDPS KK K ILDYSGPDRII GH NF YPA LHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPATLHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKK+
Sbjct: 697 ALNTRSRVGGLVRVERKKKR 716
Score = 519 bits (1337), Expect(2) = 0.0
Identities = 264/328 (80%), Positives = 283/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKRNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIR+DLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTI T LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTICTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKESIK D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK T QVLK
Sbjct: 959 TKESIKEDPMIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTSQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046
>ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliifera]
Length = 1382
Score = 986 bits (2548), Expect(2) = 0.0
Identities = 497/560 (88%), Positives = 516/560 (92%)
Frame = -3
Query: 2678 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 2499
SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI
Sbjct: 158 SDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHI 217
Query: 2498 VVRRTDCGTIRGISVSPRNGMMTESIFIQTLIGRVLADDIYMGSRCIAVRNQDIGIGLVN 2319
VVRRTDCGTIRGISVSPRNGM TE I+IQTLIGRVLADDIYMG RCIA RNQDIGIGLVN
Sbjct: 218 VVRRTDCGTIRGISVSPRNGM-TEKIWIQTLIGRVLADDIYMGLRCIATRNQDIGIGLVN 276
Query: 2318 RFITFRAQPISLRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 2139
RFITFRAQ I +RTPF CRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Sbjct: 277 RFITFRAQSIYIRTPFICRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL 336
Query: 2138 TLRXXXXXXXXXXXTAKHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVIVESQD 1959
TLR TA+HVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYV +ESQD
Sbjct: 337 TLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQD 396
Query: 1958 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSNLNFKERVRKHIYSDSEGEMHWSTN 1779
ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTS NFKERVRKHIYSDSEGEMHWST+
Sbjct: 397 ILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRKHIYSDSEGEMHWSTD 456
Query: 1778 VYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSLERRYISNL 1599
VYHAPEY YGNVHLLPKTSHLWILSG P RSSIV FSLHKDQDQMN++S S+ERRYIS+L
Sbjct: 457 VYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNLHSLSVERRYISDL 516
Query: 1598 SVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSDLVAKRRRN 1419
SVTND+VRHKLF SDP KK + ILDYSGPDRII GH NF YPAILHENSDL+AKRRRN
Sbjct: 517 SVTNDRVRHKLFSSDPYSKKGQGILDYSGPDRIISNGHWNFLYPAILHENSDLLAKRRRN 576
Query: 1418 RFIIPFQPNQEREKELIPCSGISIEIPINGIFRINSILAYFDDPRYRRNSSGITKYGTIE 1239
RFIIPFQ +QEREKEL+P SGISIEIPINGI R NSILAYFDDPRYRR+SSGITKYGTIE
Sbjct: 577 RFIIPFQYDQEREKELMPRSGISIEIPINGILRRNSILAYFDDPRYRRSSSGITKYGTIE 636
Query: 1238 VDSIVKKEDLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQI 1059
VDSIVKKEDLIEYRG KEFR K Q+K+DRFFFIPEEVHILPGSSSIMVRNNSIIGVDT+I
Sbjct: 637 VDSIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRI 696
Query: 1058 TLNIKSRVGGLVRVERKKKK 999
LN +SRVGGLVRVERKKKK
Sbjct: 697 ALNTRSRVGGLVRVERKKKK 716
Score = 524 bits (1350), Expect(2) = 0.0
Identities = 266/328 (81%), Positives = 284/328 (86%)
Frame = -1
Query: 985 IFSGDIHFPGETDKISWHSGILIPPGTGXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 806
IFSGDIHF GETDKIS HSGILIPPGTG NWIYVQRITPTKKKYFV VRP
Sbjct: 721 IFSGDIHFTGETDKISRHSGILIPPGTGKLNSKESKKWKNWIYVQRITPTKKKYFVSVRP 780
Query: 805 VITYEIADGINLATLFPEDLLQERDNVQLRVVNYILYGNGKPIRGISHTSIQLVRTCLVL 626
V+TYEIADGINL TLFP+DLLQERDNVQLRVVNYILYGNGKPIRGI HTSIQLVRTCLVL
Sbjct: 781 VVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVL 840
Query: 625 NWDQEKNGSSREEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIPANGS 446
NWDQ++NGS EEVHASFV+V NDLIRDFIRMDLVKS ISY GKRND+AGSGLIP N S
Sbjct: 841 NWDQDRNGSI-EEVHASFVEVGANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPDNES 899
Query: 445 DRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSSNCLRMGPFNGLKNNNV 266
DRTN+N FYSKTRI QSLTQH+GTIRT LNRNKECQS +ILSSS+C R+GPFNG K++ V
Sbjct: 900 DRTNINTFYSKTRI-QSLTQHQGTIRTFLNRNKECQSFLILSSSDCSRIGPFNGSKSHKV 958
Query: 265 TKESIKRDSLLPIRNSLGPLGIVPKITNFDSFYHLITHNQILVNKYLLLDNLKHTFQVLK 86
TKES K D ++PIRNSLGPLG V KI NF S Y+LITHNQIL+NKYLLLDNLK TFQVLK
Sbjct: 959 TKESSKEDPVIPIRNSLGPLGTVSKIANFYSSYYLITHNQILLNKYLLLDNLKQTFQVLK 1018
Query: 85 YYFMDENGRIYNPDSCSNIILNPFNLNW 2
YY MDENGRIYNPD SNII NPF+LNW
Sbjct: 1019 YYLMDENGRIYNPDPRSNIIFNPFDLNW 1046