BLASTX nr result

ID: Akebia24_contig00023094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00023094
         (638 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...    82   1e-13
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...    80   5e-13
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ...    78   2e-12
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...    78   2e-12
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...    75   1e-11
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...    75   1e-11
emb|CBI36057.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ...    75   2e-11
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...    75   2e-11
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ...    75   2e-11
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu...    72   1e-10
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]      69   2e-09
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A...    68   2e-09
ref|XP_006279933.1| hypothetical protein CARUB_v10025791mg [Caps...    68   3e-09
ref|XP_003616940.1| MMS19 nucleotide excision repair protein-lik...    67   6e-09
ref|NP_199623.2| ARM repeat superfamily protein [Arabidopsis tha...    66   8e-09
dbj|BAB11076.1| unnamed protein product [Arabidopsis thaliana]         66   8e-09
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...    65   1e-08
ref|XP_007150605.1| hypothetical protein PHAVU_005G166100g [Phas...    63   7e-08
ref|XP_006395217.1| hypothetical protein EUTSA_v10003552mg [Eutr...    63   7e-08

>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 37/46 (80%), Positives = 44/46 (95%)
 Frame = -1

Query: 638  TRIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            TRIYP+R+Q+LQA+SKALDDPKR VRQEAVRCRQAWASIAS ++H+
Sbjct: 1129 TRIYPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASIASRSLHY 1174


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao]
          Length = 1149

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            R+YPMR Q+LQA++KALDDPKR VRQEAVRCRQAWASIAS ++HF
Sbjct: 1105 RVYPMRTQVLQAIAKALDDPKRAVRQEAVRCRQAWASIASRSLHF 1149


>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 914

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+L  +SKALDDPKR+VRQEAVRCRQAWASIAS ++HF
Sbjct: 870  RIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWASIASRSLHF 914


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+L  +SKALDDPKR+VRQEAVRCRQAWASIAS ++HF
Sbjct: 1103 RIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWASIASRSLHF 1147


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+LQA+S+ALDDPKR VRQEAVRCRQAWAS AS +++F
Sbjct: 1107 RIYPMRRQVLQAVSRALDDPKRAVRQEAVRCRQAWASTASRSLYF 1151


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Citrus sinensis]
          Length = 1155

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+LQA+S+ALDDPKR VRQEAVRCRQAWAS AS +++F
Sbjct: 1111 RIYPMRRQVLQAVSRALDDPKRAVRQEAVRCRQAWASTASRSLYF 1155


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+L+++ KALDDPKR VR EAVRCRQAWASIAS ++HF
Sbjct: 1102 RIYPMRTQVLRSVQKALDDPKRAVRHEAVRCRQAWASIASRSLHF 1146


>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
            tuberosum]
          Length = 1170

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+LQA++KALDDPKR VR EAV+CR AWASIAS ++HF
Sbjct: 1126 RIYPMRTQVLQAITKALDDPKRAVRLEAVKCRLAWASIASRSIHF 1170


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
            gi|557528866|gb|ESR40116.1| hypothetical protein
            CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR ++LQA+S+ALDDPKR VRQEAVRCRQAWAS AS +++F
Sbjct: 1111 RIYPMRREVLQAISRALDDPKRAVRQEAVRCRQAWASTASRSLYF 1155


>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
            lycopersicum]
          Length = 1153

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMR Q+LQA++KALDDPKR VR EAV+CR AWASIAS ++HF
Sbjct: 1109 RIYPMRTQVLQAITKALDDPKRVVRLEAVKCRLAWASIASRSIHF 1153


>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
           gi|550342418|gb|ERP63247.1| hypothetical protein
           POPTR_0003s04720g [Populus trichocarpa]
          Length = 913

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = -1

Query: 638 TRIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASI 522
           TRIYPMR+Q+LQA+SKALDDPKR VRQEAVRCRQAW+ I
Sbjct: 875 TRIYPMRIQVLQAVSKALDDPKRAVRQEAVRCRQAWSVI 913


>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
          Length = 1210

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = -1

Query: 638  TRIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTN 510
            TRIYPMR ++LQA+SKALDDPKR VRQEAVRC+QAW+ +   N
Sbjct: 1139 TRIYPMRTKVLQAMSKALDDPKRAVRQEAVRCQQAWSVLWGVN 1181


>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
            gi|548857353|gb|ERN15159.1| hypothetical protein
            AMTR_s00056p00136660 [Amborella trichopoda]
          Length = 1160

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYPMRLQ+L+ +SKALDD KR+VRQEAVRC   WAS+AS ++ F
Sbjct: 1116 RIYPMRLQVLETVSKALDDQKRSVRQEAVRCHHVWASMASRSLRF 1160


>ref|XP_006279933.1| hypothetical protein CARUB_v10025791mg [Capsella rubella]
            gi|482548637|gb|EOA12831.1| hypothetical protein
            CARUB_v10025791mg [Capsella rubella]
          Length = 1046

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIASTNVHF 501
            RIYP R Q+L+A++K+LDDPKR VR+EA+RC+QAWASI ST+  F
Sbjct: 1002 RIYPFRRQVLKAIAKSLDDPKRRVREEAIRCKQAWASITSTSNPF 1046


>ref|XP_003616940.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355518275|gb|AES99898.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1139

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIAST 513
            RIYP+R Q+L+A+SK LDD KR+VR EAV+CRQAWASIAS+
Sbjct: 1094 RIYPLRTQVLEAISKCLDDTKRSVRNEAVKCRQAWASIASS 1134


>ref|NP_199623.2| ARM repeat superfamily protein [Arabidopsis thaliana]
            gi|110741897|dbj|BAE98890.1| hypothetical protein
            [Arabidopsis thaliana] gi|332008238|gb|AED95621.1| ARM
            repeat superfamily protein [Arabidopsis thaliana]
          Length = 1134

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIAS 516
            RIYP R ++LQA+ K+LDDPKR VR+EA+RCRQAWASI S
Sbjct: 1090 RIYPFRREVLQAIEKSLDDPKRKVREEAIRCRQAWASITS 1129


>dbj|BAB11076.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1152

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIAS 516
            RIYP R ++LQA+ K+LDDPKR VR+EA+RCRQAWASI S
Sbjct: 1108 RIYPFRREVLQAIEKSLDDPKRKVREEAIRCRQAWASITS 1147


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIAST 513
            RIYP+R Q+LQA+ K LDD KR+VR EAV+CRQAWASIAS+
Sbjct: 1095 RIYPLRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWASIASS 1135


>ref|XP_007150605.1| hypothetical protein PHAVU_005G166100g [Phaseolus vulgaris]
            gi|561023869|gb|ESW22599.1| hypothetical protein
            PHAVU_005G166100g [Phaseolus vulgaris]
          Length = 1145

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -1

Query: 638  TRIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAWASIAS 516
            +RIYPMR Q+LQA+SK LDD +R VR EAV+CRQ WAS++S
Sbjct: 1101 SRIYPMRTQVLQAISKCLDDTRRVVRYEAVKCRQTWASMSS 1141


>ref|XP_006395217.1| hypothetical protein EUTSA_v10003552mg [Eutrema salsugineum]
            gi|557091856|gb|ESQ32503.1| hypothetical protein
            EUTSA_v10003552mg [Eutrema salsugineum]
          Length = 1124

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = -1

Query: 635  RIYPMRLQLLQALSKALDDPKRTVRQEAVRCRQAW 531
            RIYP R Q+LQA++KALDDPKR VR+EAVRCRQAW
Sbjct: 1087 RIYPFRRQVLQAITKALDDPKRRVREEAVRCRQAW 1121


Top