BLASTX nr result

ID: Akebia24_contig00022445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00022445
         (308 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83485.2| hypothetical protein (mitochondrion) [Nicotiana ...    61   4e-08
ref|YP_173421.1| hypothetical protein NitaMp079 [Nicotiana tabacum]    59   2e-07
pir||S42982 hypothetical protein 224 - evening primrose mitochon...    58   1e-06
emb|CAN65168.1| hypothetical protein VITISV_029402 [Vitis vinifera]    54   5e-06

>dbj|BAD83485.2| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 216

 Score = 61.2 bits (147), Expect(2) = 4e-08
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +3

Query: 204 RGGIQKRLMMSIYLSRLFPRSNSSFLLCSGNALQS 308
           RGG +K+LMMSIYLSRLFPRSNSSF LCSGNALQS
Sbjct: 9   RGG-KKKLMMSIYLSRLFPRSNSSFFLCSGNALQS 42



 Score = 21.9 bits (45), Expect(2) = 4e-08
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 185 MLLINRKRRNTKK 223
           MLLINR RR  KK
Sbjct: 1   MLLINRTRRGGKK 13


>ref|YP_173421.1| hypothetical protein NitaMp079 [Nicotiana tabacum]
          Length = 216

 Score = 58.9 bits (141), Expect(2) = 2e-07
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = +3

Query: 204 RGGIQKRLMMSIYLSRLFPRSNSSFLLCSGNALQS 308
           RGG +K+LMMSIYLSR FPRSNSSF LCSGNALQS
Sbjct: 9   RGG-KKKLMMSIYLSRSFPRSNSSFFLCSGNALQS 42



 Score = 21.9 bits (45), Expect(2) = 2e-07
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 185 MLLINRKRRNTKK 223
           MLLINR RR  KK
Sbjct: 1   MLLINRTRRGGKK 13


>pir||S42982 hypothetical protein 224 - evening primrose mitochondrion
           gi|459533|emb|CAA54968.1| rps1 [Oenothera berteroana]
          Length = 224

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 201 GRGGIQKRLMMSIYLSRLFPRSNSSFLLCSGNALQS 308
           GRGG +K+ +MSIYLSR F RSNSSF LCSGNALQS
Sbjct: 8   GRGGKKKKQLMSIYLSRSFTRSNSSFFLCSGNALQS 43


>emb|CAN65168.1| hypothetical protein VITISV_029402 [Vitis vinifera]
          Length = 217

 Score = 54.3 bits (129), Expect(2) = 5e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +3

Query: 219 KRLMMSIYLSRLFPRSNSSFLLCSGNALQS 308
           K+LMMSIYLSR FPRSNSSF LCSGNA QS
Sbjct: 13  KKLMMSIYLSRSFPRSNSSFFLCSGNASQS 42



 Score = 21.6 bits (44), Expect(2) = 5e-06
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 185 MLLINRKRRNTKK 223
           MLLINRKRR   K
Sbjct: 1   MLLINRKRRKKIK 13


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