BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00022246
         (2025 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007029495.1| Pentatricopeptide repeat-containing protein,...   650   0.0  
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...   644   0.0  
ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containi...   640   0.0  
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   639   e-180
ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citr...   638   e-180
ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containi...   619   e-174
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi...   616   e-173
gb|EXB29192.1| hypothetical protein L484_019727 [Morus notabilis]     606   e-170
ref|XP_007029496.1| Pentatricopeptide repeat-containing protein,...   602   e-169
ref|XP_007029497.1| Pentatricopeptide repeat-containing protein,...   599   e-168
emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]   593   e-166
gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Mimulus...   588   e-165
ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containi...   588   e-165
dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]                               580   e-163
ref|XP_007217997.1| hypothetical protein PRUPE_ppa005672mg [Prun...   575   e-161
ref|XP_006590461.1| PREDICTED: pentatricopeptide repeat-containi...   563   e-158
ref|XP_006850860.1| hypothetical protein AMTR_s00025p00142780 [A...   561   e-157
ref|XP_007029498.1| Pentatricopeptide repeat-containing protein,...   560   e-157
ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group] g...   550   e-154
ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containi...   541   e-151

>ref|XP_007029495.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508718100|gb|EOY09997.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 513

 Score =  650 bits (1678), Expect = 0.0
 Identities = 311/443 (70%), Positives = 383/443 (86%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            GEEL+ E +N +I+ +CK G++D +M L++ MEA+GF PNS+SY  LIE LG++GRTLEA
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            D +FQEM   GL+PR++ +NVLL+ FLRKGLLRLA KVLV M +RGV KNQETY+  L+Y
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            YV AGRLEDTW V+++MK  G  LNS VYSK+I LYRDNGMW+KA+G++ E++E+G+SLD
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            R++YNSIIDTFGKYGEL+EA+EVFE M++E I+PDI TWNSLI+WHCKAGD++ ALE F 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            +MQEQGLYPDPKIF+ +IS+LGE GKWD+IK NFE+MK RG +  GAIYA+LVDIYGQYG
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            RF+DAE C+ ALKSEGL  SASMFC LANAYAQQG CEQTVKVLQ+ME EGIEPN++MLN
Sbjct: 371  RFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLN 430

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESV 1751
            +LINAFGIAGRH EALS++HH+++ GISPDV+TY+TLMKAFIR +KFD+V  IY+EMES 
Sbjct: 431  VLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREMESS 490

Query: 1752 GCTPDRKAREMLQTASIVLDQRH 1820
            GCTPDRKAR+MLQTA +VL+QRH
Sbjct: 491  GCTPDRKARQMLQTALMVLEQRH 513


>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  644 bits (1660), Expect = 0.0
 Identities = 316/445 (71%), Positives = 375/445 (84%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            ++GEELS   YN  IR  C+ G++D +M LL++MEALGF  +  SY  +IE LG++GRTL
Sbjct: 16   ENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTL 75

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
            EA+ IF+EM   GL+  ++ YNV+LR  LRKGLL LADKVL EM   G+ +N+ TY+  +
Sbjct: 76   EAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALV 135

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
            +YY RAGRL D W+VI +M RDGF  +S VYSK+IG+YRDNGMWKKAM ++RE++E G+S
Sbjct: 136  DYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVS 195

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEF 1205
            LD+R+YNSIIDTFGK GEL+EA+EVFE MQ EG+KPDI+TWNSLI+WHCKAGDV  ALE 
Sbjct: 196  LDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALEL 255

Query: 1206 FGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQ 1385
            F KMQE+GLYPDPKIF+ IIS+LGE+GKWDVIK NFE+MK RG +RSGAIYA+LVDIYGQ
Sbjct: 256  FSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQ 315

Query: 1386 YGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIM 1565
            YGRF+  EEC+ ALKSEG+Q SASMFC LANAYAQQGLCEQTVKVLQLME EGIEPNLIM
Sbjct: 316  YGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIM 375

Query: 1566 LNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEME 1745
            LN+LINAFGIAGRHLEALSV+HH+K+ GISPDVVTY+TLMKA IR RKFD+V  IY+EME
Sbjct: 376  LNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEME 435

Query: 1746 SVGCTPDRKAREMLQTASIVLDQRH 1820
            S GCTPDRKAREMLQTA +VL QRH
Sbjct: 436  SAGCTPDRKAREMLQTALLVLQQRH 460



 Score =  101 bits (252), Expect = 1e-18
 Identities = 58/256 (22%), Positives = 125/256 (48%)
 Frame = +3

Query: 1005 MKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGD 1184
            + E G  L   +YN+ I    + G++++A+++   M+  G    + ++ ++I      G 
Sbjct: 14   ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 73

Query: 1185 VSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAV 1364
               A   F +M   GL  D +++ +++     +G  ++       M   G+ R+ A Y  
Sbjct: 74   TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 133

Query: 1365 LVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEG 1544
            LVD YG+ GR  D    +  +  +G    + ++  +   Y   G+ ++ +++++ + + G
Sbjct: 134  LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 193

Query: 1545 IEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVV 1724
            +  +  + N +I+ FG  G   EAL VF  M+E G+ PD++T+ +L++   +     + +
Sbjct: 194  VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKAL 253

Query: 1725 GIYKEMESVGCTPDRK 1772
             ++ +M+  G  PD K
Sbjct: 254  ELFSKMQEEGLYPDPK 269


>ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 514

 Score =  640 bits (1650), Expect = 0.0
 Identities = 321/512 (62%), Positives = 396/512 (77%), Gaps = 7/512 (1%)
 Frame = +3

Query: 303  FPTKSPPLPSIHGISPSTIRFGFHNCFDKFKT-SFNPTQSSRIKETMKNXXXXXXXXXXX 479
            F  K+  L  IHG SP ++ F  H+   +      N +  S ++  +K            
Sbjct: 2    FNLKTISLLPIHGTSPLSVFFSTHSSSREHAGHKLNSSCHSGMRRCVKEGYAYSLGNKNL 61

Query: 480  XVKD------GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIEC 641
             +K       GEE S   YN SI+  CK G+ID +M+LL++M+ALGF P+S+SY  LIE 
Sbjct: 62   SIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEA 121

Query: 642  LGNLGRTLEADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKN 821
            L ++GRTLEAD IFQEM   G  P+++ YN+LLR FL+KGLL L  ++L+ M D G+ +N
Sbjct: 122  LASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRN 181

Query: 822  QETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMR 1001
            QETY+  L+Y+V AGRL+DTW +I++M+  GF LNS VY K+IGLYRDNGMWKKA+G++ 
Sbjct: 182  QETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVE 241

Query: 1002 EMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAG 1181
            E++E GLSLDR++YNSIIDTFGKYGEL EA+EVFE MQ+E I+PDI+TWNSLIRWHCKAG
Sbjct: 242  EIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAG 301

Query: 1182 DVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYA 1361
            DV+ ALE F +MQEQG YPDPKIF+ IIS LGE GKWDVIK NFE+MK RG  + GAIYA
Sbjct: 302  DVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYA 361

Query: 1362 VLVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDE 1541
            +LVDIYGQYGRFRD EEC+ ALK EGLQ S SMFC LANAYAQQGLCEQTVKVLQLME E
Sbjct: 362  ILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPE 421

Query: 1542 GIEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQV 1721
            GIEPNL+MLN+LINAFG+AG++ EALSV+H MK+IGISPD+VTY+TLMKAFIR +KF +V
Sbjct: 422  GIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKV 481

Query: 1722 VGIYKEMESVGCTPDRKAREMLQTASIVLDQR 1817
              IYK+MES GCTPDRKAR++LQ+A +VL+QR
Sbjct: 482  PEIYKQMESSGCTPDRKARQILQSALVVLEQR 513


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  639 bits (1649), Expect = e-180
 Identities = 307/443 (69%), Positives = 379/443 (85%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            G+ELS E YN+ I + CK G++D +M+LL+ M++LGF P+S+SY CLIE L ++GRTLEA
Sbjct: 16   GQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEA 75

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            + ++QEM   GL+PR+K YN++LR FL+KGLLR+A++VL  + D G+ +NQETY+  L+Y
Sbjct: 76   EALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDY 135

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
             V AGRLEDTWSVI++MK+ GF LNS VYSK+IGLYRDNGMWKKA+G++ E++E G+ LD
Sbjct: 136  NVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLD 195

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            + +YNSIIDTFGKYGEL+EA+EV  NMQ++GI PDI+TWNSLIRWHCKAG++S ALE F 
Sbjct: 196  KHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFS 255

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            KMQ QGLYPDPKI V IIS+L E+GKW++I+ NF+ MK  G ++SGAIYA+LVDIYGQYG
Sbjct: 256  KMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYG 315

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            RF+DAEEC+ ALKSEG+  SASMFC LANAYAQQGLCEQTVKVLQLME EGIEPNLIMLN
Sbjct: 316  RFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLN 375

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESV 1751
            +LINAFGIAGRH EALS++HHMKE GISPDVVTY+TLMKA+IR RKFD+V  IY EMES 
Sbjct: 376  VLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESS 435

Query: 1752 GCTPDRKAREMLQTASIVLDQRH 1820
            GCTPD+KARE+LQ A +VL +R+
Sbjct: 436  GCTPDKKAREILQAALMVLGRRN 458



 Score = 65.5 bits (158), Expect = 9e-08
 Identities = 51/231 (22%), Positives = 87/231 (37%), Gaps = 35/231 (15%)
 Frame = +3

Query: 516  YNNSIRNHCKEGEIDTSMSLLSRMEALGFRPN---------------------------- 611
            +N+ IR HCK G +  ++ L S+M+A G  P+                            
Sbjct: 234  WNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMK 293

Query: 612  -------SMSYICLIECLGNLGRTLEADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLR 770
                      Y  L++  G  GR  +A+     +K  G+ P    + VL   + ++GL  
Sbjct: 294  SWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCE 353

Query: 771  LADKVLVEMHDRGVSKNQETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLI 950
               KVL  M   G+  N    +  +  +  AGR  +  S+   MK  G S +   YS L+
Sbjct: 354  QTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLM 413

Query: 951  GLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVF 1103
              Y     + +   +  EM+  G + D++    +       G  N   ++F
Sbjct: 414  KAYIRARKFDEVPEIYSEMESSGCTPDKKAREILQAALMVLGRRNCKFQIF 464


>ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citrus clementina]
            gi|567871835|ref|XP_006428507.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
            gi|557530563|gb|ESR41746.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
            gi|557530564|gb|ESR41747.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
          Length = 514

 Score =  638 bits (1646), Expect = e-180
 Identities = 320/512 (62%), Positives = 396/512 (77%), Gaps = 7/512 (1%)
 Frame = +3

Query: 303  FPTKSPPLPSIHGISPSTIRFGFHNCFDKFKT-SFNPTQSSRIKETMKNXXXXXXXXXXX 479
            F  K+  L  IHG SP ++ F  H+   +      N +  S ++  +K            
Sbjct: 2    FNLKTISLLPIHGTSPLSVFFSTHSSSREHAGHKLNSSCHSGMRRCVKEGYAYSLGNKNL 61

Query: 480  XVKD------GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIEC 641
             +K       GEE S   YN SI+  CK G+ID +M+LL++M+ALGF P+S+SY  LIE 
Sbjct: 62   SIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEA 121

Query: 642  LGNLGRTLEADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKN 821
            L ++GRTLEAD IFQEM   G  P+++ YN+LLR FL+KGLL L  ++L+ M D G+ +N
Sbjct: 122  LASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRN 181

Query: 822  QETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMR 1001
            QETY+  L+Y+V AGRL+DTW +I++M+  GF LNS VY K+IGLYRDNGMWKKA+G++ 
Sbjct: 182  QETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVE 241

Query: 1002 EMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAG 1181
            E++E GLSLDR++YNSIIDTFGKYGEL EA+EVFE M++E I+PDI+TWNSLIRWHCKAG
Sbjct: 242  EIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMRQESIRPDIVTWNSLIRWHCKAG 301

Query: 1182 DVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYA 1361
            DV+ ALE F +MQEQG YPDPKIF+ IIS LGE GKWDVIK NFE+MK RG  + GAIYA
Sbjct: 302  DVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYA 361

Query: 1362 VLVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDE 1541
            +LVDIYGQYGRFRD EEC+ ALK EGLQ S SMFC LANAYAQQGLCEQTVKVLQLME E
Sbjct: 362  ILVDIYGQYGRFRDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPE 421

Query: 1542 GIEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQV 1721
            GIEPNL+MLN+LINAFG+AG++ EALSV+H MK+IGISPD+VTY+TLMKAFIR +KF +V
Sbjct: 422  GIEPNLVMLNVLINAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKV 481

Query: 1722 VGIYKEMESVGCTPDRKAREMLQTASIVLDQR 1817
              IYK+MES GCTPDRKAR++LQ+A +VL+QR
Sbjct: 482  PEIYKQMESSGCTPDRKARQILQSALVVLEQR 513


>ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 523

 Score =  619 bits (1595), Expect = e-174
 Identities = 300/445 (67%), Positives = 366/445 (82%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            ++GEE+S + YN SI   C EG+ID +M LLS MEALGF P+ +SY  LI  LG++GRT 
Sbjct: 78   RNGEEISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTS 137

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
            EAD IFQEM  S  +PR+K +N+LLR FLRKGLLRLADKVL+ + D  V +NQETY+  L
Sbjct: 138  EADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILL 197

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
            EYYV AGRLEDTW +++KM+R+ + LNS VYSK+I LYRDNGMWKKA+G++ E++E GL 
Sbjct: 198  EYYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLR 257

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEF 1205
            LD+R++NSIIDTFGKYGEL EA+ +F+ M++EGIKPD  TWNSLIRWHCK G +  A+E 
Sbjct: 258  LDKRLFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIEL 317

Query: 1206 FGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQ 1385
            F +MQEQGLYPDPKIF+II + L E+G+WD I    ESM+ RG  +SGAIYAVLVDIYGQ
Sbjct: 318  FNEMQEQGLYPDPKIFIIINTHLVEQGRWDDIDTILESMQGRGHHKSGAIYAVLVDIYGQ 377

Query: 1386 YGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIM 1565
             GRF DAE CL ALK EGLQLS S+FC LA+AYAQQGLCEQTVKVLQ+ME EG+EPNLIM
Sbjct: 378  QGRFEDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIM 437

Query: 1566 LNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEME 1745
            LN+LINAFG AGRH+EA S++ H+KE+GI+PDV+TY+TLMKAF+R +KFDQV  IY EME
Sbjct: 438  LNMLINAFGNAGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEME 497

Query: 1746 SVGCTPDRKAREMLQTASIVLDQRH 1820
            S GCTPDRKAREMLQ+A ++L+QRH
Sbjct: 498  STGCTPDRKAREMLQSALMILEQRH 522



 Score = 95.9 bits (237), Expect = 6e-17
 Identities = 74/342 (21%), Positives = 146/342 (42%), Gaps = 10/342 (2%)
 Frame = +3

Query: 894  SKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKY 1073
            S+ KR GF +N             NG  + +    +     G  +   +YN  I      
Sbjct: 50   SRGKRFGFLVNCL-----------NGTIENSNNEQQTCYRNGEEISYDLYNESICELCTE 98

Query: 1074 GELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIF 1253
            G++++A+ +   M+  G  P  ++++SLI      G  S A   F +M      P  K+F
Sbjct: 99   GDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADAIFQEMLCSSRKPRIKVF 158

Query: 1254 VIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEECLLALKS 1433
             I++     +G   +       +    + R+   Y +L++ Y   GR  D    +  ++ 
Sbjct: 159  NILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYVSAGRLEDTWLIVAKMRR 218

Query: 1434 EGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLINAFGIAGRHLE 1613
            E   L++ ++  +   Y   G+ ++ + +++ + + G+  +  + N +I+ FG  G   E
Sbjct: 219  ESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGELGE 278

Query: 1614 ALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVGCTPDRKAREMLQT 1793
            AL +F  M++ GI PD  T+ +L++   +    D  + ++ EM+  G  PD K   ++ T
Sbjct: 279  ALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEMQEQGLYPDPKIFIIINT 338

Query: 1794 ASI----------VLDQRHGRTPKQ*TFFKSGGVAAKFTDLF 1889
              +          +L+   GR        KSG + A   D++
Sbjct: 339  HLVEQGRWDDIDTILESMQGR-----GHHKSGAIYAVLVDIY 375


>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Solanum tuberosum]
            gi|565369409|ref|XP_006351328.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565369411|ref|XP_006351329.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 523

 Score =  616 bits (1589), Expect = e-173
 Identities = 297/445 (66%), Positives = 368/445 (82%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            ++ EE+S + YN SI   C EG++D +M LLS MEALGF P+ +SY  LI  LG++GRT 
Sbjct: 78   RNDEEISYDLYNESICELCTEGDVDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTS 137

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
            EAD IFQEM  S  +PR+K +N+LLR FLRKGLLRLADKVL+ + D  V +NQETY+  L
Sbjct: 138  EADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILL 197

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
            EYYV AGRLEDTW +++KM+R+ + LNS VYSK+I LYRDNGMWKKA+G++ E++E GL 
Sbjct: 198  EYYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLR 257

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEF 1205
            LD+R++NSIIDTFGKYGEL EA+E+F+ M++EGIKPD  TWNSLIRWHCK G +  A+E 
Sbjct: 258  LDKRIFNSIIDTFGKYGELGEALEMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIEL 317

Query: 1206 FGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQ 1385
            F +MQ+QGLYPDPKIF+III+ L E+G+W VI    E+M+ RG  +SGAIYAVLVDIYGQ
Sbjct: 318  FNEMQDQGLYPDPKIFIIIITHLVEQGRWAVIDTILENMQGRGHHKSGAIYAVLVDIYGQ 377

Query: 1386 YGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIM 1565
            +GRF DAE CL +LK EGLQLS S+FC LA+AYAQQGLCEQTVKVLQ+ME EG+EPNLIM
Sbjct: 378  HGRFEDAEYCLNSLKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIM 437

Query: 1566 LNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEME 1745
            LN+LINAFG AGRH+EA S++ H+KE+GI+PDV+TY+TLMKAF+R +KFDQV  IY EME
Sbjct: 438  LNMLINAFGNAGRHMEAQSIYLHIKEMGITPDVITYSTLMKAFMRAKKFDQVPKIYSEME 497

Query: 1746 SVGCTPDRKAREMLQTASIVLDQRH 1820
            S GCTPDRKAREMLQ+A ++L+QRH
Sbjct: 498  STGCTPDRKAREMLQSALMILEQRH 522



 Score = 77.0 bits (188), Expect = 3e-11
 Identities = 60/297 (20%), Positives = 133/297 (44%)
 Frame = +3

Query: 864  GRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMY 1043
            G +E++ +      R+   ++  +Y++ I      G   KAM L+ EM+  G       Y
Sbjct: 64   GTIENSNNEHQTCYRNDEEISYDLYNESICELCTEGDVDKAMRLLSEMEALGFHPSFVSY 123

Query: 1044 NSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQE 1223
            +S+I   G  G  +EA  +F+ M     KP I  +N L+R   + G +  A +    + +
Sbjct: 124  SSLIAALGSVGRTSEADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDD 183

Query: 1224 QGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRD 1403
              +  + + + I++      G+ +        M+      +  +Y+ ++++Y   G ++ 
Sbjct: 184  LAVDRNQETYEILLEYYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKK 243

Query: 1404 AEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLIN 1583
            A   +  ++  GL+L   +F ++ + + + G   + +++   M  EGI+P+    N LI 
Sbjct: 244  ALGIVEEIREMGLRLDKRIFNSIIDTFGKYGELGEALEMFDKMRQEGIKPDFRTWNSLIR 303

Query: 1584 AFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVG 1754
                 G    A+ +F+ M++ G+ PD   +  ++   +   ++  +  I + M+  G
Sbjct: 304  WHCKYGHLDTAIELFNEMQDQGLYPDPKIFIIIITHLVEQGRWAVIDTILENMQGRG 360


>gb|EXB29192.1| hypothetical protein L484_019727 [Morus notabilis]
          Length = 506

 Score =  606 bits (1563), Expect = e-170
 Identities = 289/441 (65%), Positives = 363/441 (82%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            GEELS E YN+ IR +C+ G +D +M+LL+++  LGF P+  +Y CLIE LG++GRTLEA
Sbjct: 65   GEELSGETYNHLIREYCRAGNVDGAMTLLAQLNGLGFHPSFATYACLIEALGSVGRTLEA 124

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            + +FQEM+  G +P +K  NVLL+  L+KGLL +  +VL  M + GV KN+E+Y+  L+Y
Sbjct: 125  ECLFQEMRFFGFKPGIKLCNVLLKGCLKKGLLEVGIRVLELMDEVGVEKNRESYEILLDY 184

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            YV AGRLEDTW VI++M+  GF L+S VY K+IGLYRDNGMWKKAM ++ E++E GL+  
Sbjct: 185  YVNAGRLEDTWWVINEMRSKGFRLSSFVYGKVIGLYRDNGMWKKAMDVVEEIREMGLASV 244

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            R++YNSIIDTFGKYGEL++A++VFE M+ E +KPDI TWNSLI WHC+AGDV  ALE F 
Sbjct: 245  RKVYNSIIDTFGKYGELDDALQVFEKMRGENVKPDITTWNSLILWHCRAGDVGKALELFA 304

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            +MQE+GLYPDPKIF+ +IS+LGE+GKWD+IK  FE+M  RG ++SG IY VLVDIYGQYG
Sbjct: 305  EMQEEGLYPDPKIFITVISRLGEQGKWDMIKKMFENMNCRGYKKSGVIYGVLVDIYGQYG 364

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            +F+ AEEC+ ALK EGL +SAS+FC LANAYAQQGLC+QT+KVLQLME EGIEPN++MLN
Sbjct: 365  KFQGAEECISALKWEGLPISASVFCVLANAYAQQGLCDQTLKVLQLMEAEGIEPNVVMLN 424

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESV 1751
            +LINAFGIAGRHLEALS++HH+KEIG SPDVVTYTTLMKAFIR +K D+V  IYKEME  
Sbjct: 425  VLINAFGIAGRHLEALSIYHHIKEIGFSPDVVTYTTLMKAFIRAKKCDKVPEIYKEMECA 484

Query: 1752 GCTPDRKAREMLQTASIVLDQ 1814
            GCTPDRKAR+ML+ A  VL+Q
Sbjct: 485  GCTPDRKARQMLKVALNVLEQ 505


>ref|XP_007029496.1| Pentatricopeptide repeat-containing protein, putative isoform 2
            [Theobroma cacao] gi|508718101|gb|EOY09998.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 2 [Theobroma cacao]
          Length = 487

 Score =  602 bits (1553), Expect = e-169
 Identities = 287/413 (69%), Positives = 356/413 (86%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            GEEL+ E +N +I+ +CK G++D +M L++ MEA+GF PNS+SY  LIE LG++GRTLEA
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            D +FQEM   GL+PR++ +NVLL+ FLRKGLLRLA KVLV M +RGV KNQETY+  L+Y
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            YV AGRLEDTW V+++MK  G  LNS VYSK+I LYRDNGMW+KA+G++ E++E+G+SLD
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            R++YNSIIDTFGKYGEL+EA+EVFE M++E I+PDI TWNSLI+WHCKAGD++ ALE F 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            +MQEQGLYPDPKIF+ +IS+LGE GKWD+IK NFE+MK RG +  GAIYA+LVDIYGQYG
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            RF+DAE C+ ALKSEGL  SASMFC LANAYAQQG CEQTVKVLQ+ME EGIEPN++MLN
Sbjct: 371  RFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLN 430

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGI 1730
            +LINAFGIAGRH EALS++HH+++ GISPDV+TY+TLMKAFIR +KFD+VV +
Sbjct: 431  VLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVVTV 483



 Score =  103 bits (257), Expect = 3e-19
 Identities = 62/252 (24%), Positives = 123/252 (48%)
 Frame = +3

Query: 1017 GLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNA 1196
            G  L   ++N  I  + K G+++ A+++  +M+  G  P+ I++  LI      G    A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 1197 LEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDI 1376
               F +M   GL P  ++F +++     +G   +       M  RG+ ++   Y +L+D 
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1377 YGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPN 1556
            Y   GR  D    +  +K +G+ L++ ++  +   Y   G+  + + +++ + ++GI  +
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1557 LIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYK 1736
              + N +I+ FG  G   EAL VF  MK+  I PD+ T+ +L++   +     + + ++ 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1737 EMESVGCTPDRK 1772
            EM+  G  PD K
Sbjct: 311  EMQEQGLYPDPK 322



 Score = 99.0 bits (245), Expect = 7e-18
 Identities = 67/281 (23%), Positives = 136/281 (48%)
 Frame = +3

Query: 912  GFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEA 1091
            G  L S ++++ I  Y   G    AM L+  M+  G   +   Y  +I++ G  G   EA
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 1092 VEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISK 1271
              +F+ M   G+KP I  +N L++   + G +  A++    M E+G+  + + + I++  
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1272 LGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEECLLALKSEGLQLS 1451
                G+ +        MK +G+  +  +Y+ ++ +Y   G +R A   +  ++ +G+ L 
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1452 ASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLINAFGIAGRHLEALSVFH 1631
              ++ ++ + + + G   + ++V + M+ E I P++   N LI     AG   +AL +F 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1632 HMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVG 1754
             M+E G+ PD   + +L+       K+D +   ++ M+S G
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRG 351



 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 71/319 (22%), Positives = 144/319 (45%)
 Frame = +3

Query: 807  GVSKNQETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKA 986
            G     E ++  ++ Y + G +++   +++ M+  GF  NS  Y  LI      G   +A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 987  MGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRW 1166
              L +EM   GL    R++N ++  F + G L  AV+V   M   G+  +  T+  L+ +
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1167 HCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRS 1346
            +  AG + +      +M+E+G++ +  ++  II    + G W       E ++ +G+   
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1347 GAIYAVLVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQ 1526
              IY  ++D +G+YG   +A E    +K E ++   + + +L   + + G   + +++  
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1527 LMEDEGIEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGR 1706
             M+++G+ P+  +   LI+  G  G+       F +MK  G       Y  L+  + +  
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1707 KFDQVVGIYKEMESVGCTP 1763
            +F         ++S G  P
Sbjct: 371  RFQDAEVCISALKSEGLLP 389


>ref|XP_007029497.1| Pentatricopeptide repeat-containing protein, putative isoform 3
            [Theobroma cacao] gi|508718102|gb|EOY09999.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 3 [Theobroma cacao]
          Length = 489

 Score =  599 bits (1544), Expect = e-168
 Identities = 293/443 (66%), Positives = 360/443 (81%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            GEEL+ E +N +I+ +CK G++D +M L++ MEA+GF PNS+SY  LIE LG++GRTLEA
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            D +FQEM   GL+PR++ +NVLL+ FLRKGLLRLA KVLV M +RGV KNQETY+  L+Y
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            YV AGRLEDTW V+++MK  G  LNS VYSK+I LYRDNGMW+KA+G++ E++E+G+SLD
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            R++YNSIIDTFGKYGEL+EA+EVFE M++E I+PDI TWNSLI+WHCKAGD++ ALE F 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            +MQEQGLYPDPKIF+ +IS+LGE GKWD+IK NFE+MK RG +  GAIYA+LVDIYGQYG
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            RF+DAE C+ ALKSEGL  SASMFC LANAYAQQG CEQTVKVLQ+ME EGIEPN++MLN
Sbjct: 371  RFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLN 430

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESV 1751
            +LINAFGIAGRH EALS++HH++                        D V  IY+EMES 
Sbjct: 431  VLINAFGIAGRHEEALSIYHHIR------------------------DSVPEIYREMESS 466

Query: 1752 GCTPDRKAREMLQTASIVLDQRH 1820
            GCTPDRKAR+MLQTA +VL+QRH
Sbjct: 467  GCTPDRKARQMLQTALMVLEQRH 489


>emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
          Length = 466

 Score =  593 bits (1528), Expect = e-166
 Identities = 297/445 (66%), Positives = 353/445 (79%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            ++GEELS   YN  IR  C+ G++D +M LL++MEALGF  +  SY  +IE LG++GRTL
Sbjct: 35   ENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTL 94

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
            EA+ IF+EM   GL+  ++ YNV+LR  LRKGLL LADKVL EM   G+ +N+ TY+  +
Sbjct: 95   EAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALV 154

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
            +YY RAGRL D W+VI +M RDGF  +S VYSK+IG+YRDNGMWKKAM ++RE++E G+S
Sbjct: 155  DYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVS 214

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEF 1205
            LD+R+YNSIIDTFGK GEL+EA+EVFE MQ EG+KPDI+TWNSLI+WHCKAGDV  ALE 
Sbjct: 215  LDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALEL 274

Query: 1206 FGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQ 1385
            F KMQE+GLYPDPKIF+ IIS+LGE+GKWDVIK NFE+MK RG +RSGAIYA+LVDIYGQ
Sbjct: 275  FSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQ 334

Query: 1386 YGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIM 1565
            YGRF+  EEC+ ALKSEG+Q SASMFC LANAYAQQGLCEQTVKVLQLME EGIEPNLIM
Sbjct: 335  YGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIM 394

Query: 1566 LNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEME 1745
            LN+LINAFGIAGRHLEALSV+HH+K                        D V  IY+EME
Sbjct: 395  LNMLINAFGIAGRHLEALSVYHHIK------------------------DTVPEIYEEME 430

Query: 1746 SVGCTPDRKAREMLQTASIVLDQRH 1820
            S GCTPDRKAREMLQTA +VL QRH
Sbjct: 431  SAGCTPDRKAREMLQTALLVLQQRH 455



 Score =  101 bits (252), Expect = 1e-18
 Identities = 58/256 (22%), Positives = 125/256 (48%)
 Frame = +3

Query: 1005 MKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGD 1184
            + E G  L   +YN+ I    + G++++A+++   M+  G    + ++ ++I      G 
Sbjct: 33   ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 92

Query: 1185 VSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAV 1364
               A   F +M   GL  D +++ +++     +G  ++       M   G+ R+ A Y  
Sbjct: 93   TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 152

Query: 1365 LVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEG 1544
            LVD YG+ GR  D    +  +  +G    + ++  +   Y   G+ ++ +++++ + + G
Sbjct: 153  LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 212

Query: 1545 IEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVV 1724
            +  +  + N +I+ FG  G   EAL VF  M+E G+ PD++T+ +L++   +     + +
Sbjct: 213  VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKAL 272

Query: 1725 GIYKEMESVGCTPDRK 1772
             ++ +M+  G  PD K
Sbjct: 273  ELFSKMQEEGLYPDPK 288


>gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Mimulus guttatus]
          Length = 432

 Score =  588 bits (1517), Expect = e-165
 Identities = 282/427 (66%), Positives = 358/427 (83%)
 Frame = +3

Query: 540  CKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEADTIFQEMKLSGLEPRV 719
            C+EGE+D +M+LLS+MEALG RP S+SY  LI  L + GRTLEAD I QEM +SG +P++
Sbjct: 6    CEEGEVDDAMALLSQMEALGVRPYSISYSYLITRLADAGRTLEADAILQEMLISGCKPKI 65

Query: 720  KAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEYYVRAGRLEDTWSVISK 899
            +  N +L   L+KGLL L++KVL+ + D G+ +N++T++  ++Y+V +GRL DTW VI++
Sbjct: 66   RLLNAMLTSCLKKGLLELSEKVLIAIDDLGLHRNRKTFEILIDYHVSSGRLNDTWLVIAE 125

Query: 900  MKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKYGE 1079
            MKR G+  NS VYSK+I +YRDNGMWKKAM +M E++E GL++DRR+Y+SIIDTF +YGE
Sbjct: 126  MKRKGYYPNSYVYSKIIEIYRDNGMWKKAMAVMGEIREMGLAMDRRIYSSIIDTFARYGE 185

Query: 1080 LNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIFVI 1259
            L EA+E+FE MQ++GIKPDI TWNSLIRWHCK GD   AL  FG+MQE+G+YPDPKIFV 
Sbjct: 186  LGEALELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRMQEEGIYPDPKIFVT 245

Query: 1260 IISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEECLLALKSEG 1439
            IIS LGE+GKWDVI+ NFE+MK+RG ++SGAIYAVLVDIYGQYG+F++AE+C++ALKSEG
Sbjct: 246  IISTLGEQGKWDVIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKFQNAEDCVMALKSEG 305

Query: 1440 LQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLINAFGIAGRHLEAL 1619
            ++LS S+FC LA+AYAQQGLCEQ VKVLQLME EG+E NLIMLN+LINAF IAGR  EAL
Sbjct: 306  VELSRSVFCVLADAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVLINAFAIAGRDTEAL 365

Query: 1620 SVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVGCTPDRKAREMLQTAS 1799
            SV+HH+ E GISPDVVTY+TLMKAF+  +KFDQV  IY EME+ GC+PDRKAREML++A 
Sbjct: 366  SVYHHILESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPDRKAREMLKSAL 425

Query: 1800 IVLDQRH 1820
            I L+QRH
Sbjct: 426  IALEQRH 432



 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 51/217 (23%), Positives = 103/217 (47%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            KDG +     +N+ IR HCK G+   ++ L  RM+  G  P+   ++ +I  LG  G+  
Sbjct: 198  KDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRMQEEGIYPDPKIFVTIISTLGEQGKWD 257

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
                 F+ MK+ G +     Y VL+ ++ + G  + A+  ++ +   GV  ++  +    
Sbjct: 258  VIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKFQNAEDCVMALKSEGVELSRSVFCVLA 317

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
            + Y + G  E    V+  M+ +G  +N  + + LI  +   G   +A+ +   + E G+S
Sbjct: 318  DAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVLINAFAIAGRDTEALSVYHHILESGIS 377

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPD 1136
             D   Y++++  F    + ++  +++  M+  G  PD
Sbjct: 378  PDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPD 414


>ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Glycine max]
            gi|571436687|ref|XP_006573838.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Glycine max]
            gi|571436689|ref|XP_006573839.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Glycine max]
          Length = 523

 Score =  588 bits (1517), Expect = e-165
 Identities = 283/444 (63%), Positives = 360/444 (81%)
 Frame = +3

Query: 483  VKDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRT 662
            + + EELS    +  I   CKEG++D +MSLLS+MEA GF  +S +Y CLIE LGN+GRT
Sbjct: 73   IGENEELSSNLCSQFICECCKEGDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRT 132

Query: 663  LEADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFF 842
             EAD +F+EM   G +P++  Y  LLR FL+KGLL LA+ VL EM   G+ +++ETY  F
Sbjct: 133  SEADMLFKEMICDGYKPKLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIF 192

Query: 843  LEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGL 1022
            L+YYV AGRLEDTWS I+ MK+ GF LNS VYSK++G+YRDNGMWKKA+ ++ E++ERG+
Sbjct: 193  LDYYVGAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGI 252

Query: 1023 SLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALE 1202
            SLD  + NSIIDTFGKYGEL+EA+++F+ MQ+EG++P+I+TWNSLI+WHCK GD   +  
Sbjct: 253  SLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFH 312

Query: 1203 FFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYG 1382
             F  MQEQGLYPDPKIFV IIS +GE+GKW +IK  FESMK+RG +  GA+YAVLVDIYG
Sbjct: 313  LFTDMQEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYG 372

Query: 1383 QYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLI 1562
            QYG+F++A EC+ ALKSEG+ +S S+FC LANAYAQQGLCEQ + VLQ+ME EGIEPN++
Sbjct: 373  QYGKFQNARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIV 432

Query: 1563 MLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEM 1742
            MLN+LINAFG AGR++EA+SV+HH+KE G+SPDVVTYTTLMKAFIR +KFD+V  IYKEM
Sbjct: 433  MLNMLINAFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEM 492

Query: 1743 ESVGCTPDRKAREMLQTASIVLDQ 1814
            E+  CTPDRKAR+MLQ A +VL++
Sbjct: 493  ENDRCTPDRKARQMLQVALMVLER 516


>dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
          Length = 517

 Score =  580 bits (1496), Expect = e-163
 Identities = 275/435 (63%), Positives = 351/435 (80%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            G+ELS E Y+  I ++CK+G +D +MS +S ++ALG  PN   Y+CLIE LGN+GRTLE 
Sbjct: 76   GKELSLEMYSEKISHYCKKGYVDKAMSCISEIQALGLCPNLFCYLCLIEGLGNVGRTLEV 135

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            + +FQEM   GL P +  +NV+LR FLRKGL +LA++ L  M D G+ KNQET + FL+Y
Sbjct: 136  EMVFQEMLYLGLRPNIVVFNVMLRGFLRKGLYKLANRALRVMEDLGMCKNQETLEIFLDY 195

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            YV   RL DTW +I  MKR G+ LNS  YS++I LYRDNGMWKKAM ++ E+ E G+ +D
Sbjct: 196  YVSGRRLSDTWRIIGDMKRKGYQLNSFAYSRVIELYRDNGMWKKAMEIVGEISEMGVPMD 255

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            RR+YNSIIDTFGKYGEL+EA++V   M+RE I PDI+TWNSLI+WHCKAGD   AL+ F 
Sbjct: 256  RRIYNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTWNSLIKWHCKAGDHMKALDLFT 315

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            +MQ+QGLYPDPKIF+I+IS+LG  GKWD+++ NFE MK RG ++SGA+YAVLVDIYGQYG
Sbjct: 316  EMQDQGLYPDPKIFIILISQLGNLGKWDLLRENFEKMKYRGHKKSGAVYAVLVDIYGQYG 375

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            +F+ AE+C+ AL++EG+Q+S++++  +ANAYAQQGLCE+TVKVLQ+ME EGIEPNLIMLN
Sbjct: 376  KFQGAEDCISALRAEGVQMSSNIYSVMANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLN 435

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESV 1751
            +LINAFGIAGRHLEALS++ H+ E GI+PD+VTYTTLMKA IR +KF +V  +Y+ ME  
Sbjct: 436  ILINAFGIAGRHLEALSIYDHIIENGINPDIVTYTTLMKALIRAKKFTKVPELYQHMELA 495

Query: 1752 GCTPDRKAREMLQTA 1796
            GCTPDRKAREMLQ A
Sbjct: 496  GCTPDRKAREMLQIA 510



 Score = 94.4 bits (233), Expect = 2e-16
 Identities = 62/283 (21%), Positives = 127/283 (44%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            + G +L+   Y+  I  +   G    +M ++  +  +G   +   Y  +I+  G  G   
Sbjct: 214  RKGYQLNSFAYSRVIELYRDNGMWKKAMEIVGEISEMGVPMDRRIYNSIIDTFGKYGELD 273

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
            EA  +  +M+   + P +  +N L++   + G    A  +  EM D+G+  + + +   +
Sbjct: 274  EALKVLVKMRREEIVPDIMTWNSLIKWHCKAGDHMKALDLFTEMQDQGLYPDPKIFIILI 333

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
                  G+ +       KMK  G   +  VY+ L+ +Y   G ++ A   +  ++  G+ 
Sbjct: 334  SQLGNLGKWDLLRENFEKMKYRGHKKSGAVYAVLVDIYGQYGKFQGAEDCISALRAEGVQ 393

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEF 1205
            +   +Y+ + + + + G   E V+V + M+ EGI+P++I  N LI     AG    AL  
Sbjct: 394  MSSNIYSVMANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLNILINAFGIAGRHLEALSI 453

Query: 1206 FGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRG 1334
            +  + E G+ PD   +  ++  L    K+  +   ++ M+L G
Sbjct: 454  YDHIIENGINPDIVTYTTLMKALIRAKKFTKVPELYQHMELAG 496


>ref|XP_007217997.1| hypothetical protein PRUPE_ppa005672mg [Prunus persica]
            gi|462414459|gb|EMJ19196.1| hypothetical protein
            PRUPE_ppa005672mg [Prunus persica]
          Length = 448

 Score =  575 bits (1482), Expect = e-161
 Identities = 286/445 (64%), Positives = 350/445 (78%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            K+ EELS E +N+ I + C+ G+ID +M+LL+ MEALG RPNSMSY  LI+ LG+ GRT 
Sbjct: 26   KENEELSGESFNHLISDFCRAGQIDKAMALLAEMEALGVRPNSMSYAHLIDALGSTGRTS 85

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
            EAD +FQEM   GL PR+K YNVLLR FL+KGLL LA +VL  M D G  KNQETY+  L
Sbjct: 86   EADMLFQEMISFGLRPRIKLYNVLLRGFLKKGLLGLAIRVLAVMGDFGAEKNQETYEILL 145

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
            +YYV AGRLEDTWS+I++MKR  F L+S VYSK+IGLYRDNGMWKKAM ++ E++E+G++
Sbjct: 146  DYYVNAGRLEDTWSMINEMKRKRFRLSSFVYSKVIGLYRDNGMWKKAMDIVGEIREKGMT 205

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEF 1205
            LD+++YNS+IDTFGKYGE++EA+EVF  M++EG+K DI T+NSLIRWHCKAGD+S ALE 
Sbjct: 206  LDKQIYNSVIDTFGKYGEVDEALEVFVKMKQEGVKADITTFNSLIRWHCKAGDISKALEL 265

Query: 1206 FGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQ 1385
              +MQEQGLYPDPKIFV +IS+LGE+GKWD+I+  FE+MK RG  +SG IYA LVDIYGQ
Sbjct: 266  LTEMQEQGLYPDPKIFVTVISRLGEQGKWDMIQKTFENMKRRGHEKSGTIYAALVDIYGQ 325

Query: 1386 YGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIM 1565
            YG+F+DAEEC+ ALK+EGL  SASMFC LANAYAQQGLC QTVKVLQLME EGIE N+IM
Sbjct: 326  YGKFKDAEECISALKAEGLIPSASMFCVLANAYAQQGLCGQTVKVLQLMEAEGIELNVIM 385

Query: 1566 LNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEME 1745
            LN+L+NAFG+AGRHLEALS++HH+ E                         V  +YKEME
Sbjct: 386  LNVLMNAFGVAGRHLEALSIYHHINE------------------------SVPEVYKEME 421

Query: 1746 SVGCTPDRKAREMLQTASIVLDQRH 1820
              GCTPDRKAR+MLQ A +VL QR+
Sbjct: 422  HAGCTPDRKARQMLQVALMVLQQRN 446


>ref|XP_006590461.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Glycine max]
          Length = 414

 Score =  563 bits (1452), Expect = e-158
 Identities = 273/416 (65%), Positives = 343/416 (82%)
 Frame = +3

Query: 567  MSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEADTIFQEMKLSGLEPRVKAYNVLLRV 746
            MSLLS+MEA GF  +S SY CLIE LGN+GRT EAD +F+EM   G +P++  Y+ LLR 
Sbjct: 1    MSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVCYGYKPKLNLYHSLLRG 60

Query: 747  FLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLN 926
            FL+KGLL LA+ VL EM D G+ +++ETY  FL+YYV AGRLEDTWS I++MK+ GF LN
Sbjct: 61   FLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLN 120

Query: 927  SRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFE 1106
            S +YSK++G+YRDNGMWKKA+ ++ E++ERG+SLD  + NSIIDTFGKYGEL+EA+++F+
Sbjct: 121  SFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFK 180

Query: 1107 NMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEG 1286
             MQ+EG++P+I+TWNSLI+WHCK GD   A   F  MQEQGLYPDPKIFV IIS LGE+G
Sbjct: 181  KMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQG 240

Query: 1287 KWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEECLLALKSEGLQLSASMFC 1466
            KWD+IK  FESMK+RG +  GA+YAVLVDIYGQYG+F++A EC+ ALKSEG+ +S S+FC
Sbjct: 241  KWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFC 300

Query: 1467 ALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEI 1646
             LANAYAQ     Q + VLQ+ME EGIEPN++MLN+LINAFG AGR++EA+SV+HH+KE 
Sbjct: 301  VLANAYAQ-----QVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKES 355

Query: 1647 GISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVGCTPDRKAREMLQTASIVLDQ 1814
            G+SPDVVTYTTLMKAFIR +KFD+V  IYKEME+ GCTPDRKAR+MLQ A  VL++
Sbjct: 356  GVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPDRKARQMLQVALTVLER 411



 Score =  112 bits (280), Expect = 6e-22
 Identities = 74/347 (21%), Positives = 165/347 (47%)
 Frame = +3

Query: 516  YNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEADTIFQEMK 695
            Y++ +R   K+G +  +  +L  M+ LG   +  +Y   ++     GR  +  +   EMK
Sbjct: 54   YHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEMK 113

Query: 696  LSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEYYVRAGRLE 875
              G       Y+ ++ ++   G+ + A +VL E+ +RG+S +    +  ++ + + G L+
Sbjct: 114  QKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELD 173

Query: 876  DTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSII 1055
            +   +  KM+++G   N   ++ LI  +   G + KA  L  +M+E+GL  D +++ +II
Sbjct: 174  EALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTII 233

Query: 1056 DTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLY 1235
               G+ G+ +   + FE+M+  G K     +  L+  + + G   NA E    ++ +G+ 
Sbjct: 234  SCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVL 293

Query: 1236 PDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEEC 1415
              P IF ++ +   ++     +    + M+  G+  +  +  +L++ +G  GR+ +A   
Sbjct: 294  VSPSIFCVLANAYAQQ-----VIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISV 348

Query: 1416 LLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPN 1556
               +K  G+      +  L  A+ +    ++   + + ME++G  P+
Sbjct: 349  YHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPD 395



 Score = 82.0 bits (201), Expect = 9e-13
 Identities = 50/217 (23%), Positives = 102/217 (47%)
 Frame = +3

Query: 486  KDGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTL 665
            K+G   +   +N+ I+ HCKEG+   +  L + M+  G  P+   ++ +I CLG  G+  
Sbjct: 184  KEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQGKWD 243

Query: 666  EADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFL 845
                 F+ MK+ G +     Y VL+ ++ + G  + A + +  +   GV  +   +    
Sbjct: 244  IIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLA 303

Query: 846  EYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLS 1025
              Y      +    V+  M+ +G   N  + + LI  + + G + +A+ +   +KE G+S
Sbjct: 304  NAYA-----QQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVS 358

Query: 1026 LDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPD 1136
             D   Y +++  F +  + +E   +++ M+ +G  PD
Sbjct: 359  PDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPD 395


>ref|XP_006850860.1| hypothetical protein AMTR_s00025p00142780 [Amborella trichopoda]
            gi|548854531|gb|ERN12441.1| hypothetical protein
            AMTR_s00025p00142780 [Amborella trichopoda]
          Length = 416

 Score =  561 bits (1447), Expect = e-157
 Identities = 268/413 (64%), Positives = 328/413 (79%)
 Frame = +3

Query: 585  MEALGFRPNSMSYICLIECLGNLGRTLEADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGL 764
            M A+G +P   SY CLI  LG +GRTLEAD IFQEMK  G  PRV++YN LL+ FLRKGL
Sbjct: 1    MGAVGMQPAINSYACLINALGTVGRTLEADAIFQEMKELGFRPRVRSYNALLKGFLRKGL 60

Query: 765  LRLADKVLVEMHDRGVSKNQETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSK 944
             +LA KVL+EM +  +  NQETY   LE Y R+GRLEDTW ++ ++K +GF  +S VYSK
Sbjct: 61   FKLATKVLMEMEELDIDPNQETYMLLLESYARSGRLEDTWLILKEIKNEGFYASSYVYSK 120

Query: 945  LIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREG 1124
            LIG+YRD+GMWK A+ L+REM++ G+S DR +YNS+IDTFGKYG+L+EAV+ FE M+ EG
Sbjct: 121  LIGIYRDHGMWKNALDLLREMQDNGVSPDRHVYNSVIDTFGKYGQLDEAVDAFEKMKHEG 180

Query: 1125 IKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIK 1304
              PDI+TWNSLI+WHCKAG++  AL+F  +M E G YPDPKIFV  IS LGEEGKW  I+
Sbjct: 181  FSPDIMTWNSLIKWHCKAGELHQALKFLNRMLECGFYPDPKIFVTFISCLGEEGKWREIR 240

Query: 1305 NNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAY 1484
              FE MKL+G + SG +Y VLVDIYGQYG+F+DA EC+ A+++EG++ S  +FCALANAY
Sbjct: 241  RAFEVMKLKGFKESGIVYGVLVDIYGQYGKFQDASECVSAMRAEGIEPSCGVFCALANAY 300

Query: 1485 AQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDV 1664
            AQQG+CEQTV VL+LME EGIE NL MLNLLINAF  AGRH+EA+SV  H+KE G+SPDV
Sbjct: 301  AQQGMCEQTVSVLRLMEAEGIEINLTMLNLLINAFSNAGRHMEAVSVLEHIKESGLSPDV 360

Query: 1665 VTYTTLMKAFIRGRKFDQVVGIYKEMESVGCTPDRKAREMLQTASIVLDQRHG 1823
            VTY+TLMKAF R RKFDQV  +YKEMES GC PDRKAREMLQ A ++L+QRHG
Sbjct: 361  VTYSTLMKAFFRARKFDQVQEVYKEMESAGCVPDRKAREMLQNALLILEQRHG 413


>ref|XP_007029498.1| Pentatricopeptide repeat-containing protein, putative isoform 4
            [Theobroma cacao] gi|508718103|gb|EOY10000.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 4 [Theobroma cacao]
          Length = 477

 Score =  560 bits (1443), Expect = e-157
 Identities = 268/389 (68%), Positives = 333/389 (85%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            GEEL+ E +N +I+ +CK G++D +M L++ MEA+GF PNS+SY  LIE LG++GRTLEA
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
            D +FQEM   GL+PR++ +NVLL+ FLRKGLLRLA KVLV M +RGV KNQETY+  L+Y
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            YV AGRLEDTW V+++MK  G  LNS VYSK+I LYRDNGMW+KA+G++ E++E+G+SLD
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
            R++YNSIIDTFGKYGEL+EA+EVFE M++E I+PDI TWNSLI+WHCKAGD++ ALE F 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1212 KMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYG 1391
            +MQEQGLYPDPKIF+ +IS+LGE GKWD+IK NFE+MK RG +  GAIYA+LVDIYGQYG
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1392 RFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLN 1571
            RF+DAE C+ ALKSEGL  SASMFC LANAYAQQG CEQTVKVLQ+ME EGIEPN++MLN
Sbjct: 371  RFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLN 430

Query: 1572 LLINAFGIAGRHLEALSVFHHMKEIGISP 1658
            +LINAFGIAGRH EALS++HH+++  +SP
Sbjct: 431  VLINAFGIAGRHEEALSIYHHIRD-SVSP 458



 Score =  103 bits (257), Expect = 3e-19
 Identities = 62/252 (24%), Positives = 123/252 (48%)
 Frame = +3

Query: 1017 GLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNA 1196
            G  L   ++N  I  + K G+++ A+++  +M+  G  P+ I++  LI      G    A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 1197 LEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDI 1376
               F +M   GL P  ++F +++     +G   +       M  RG+ ++   Y +L+D 
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1377 YGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPN 1556
            Y   GR  D    +  +K +G+ L++ ++  +   Y   G+  + + +++ + ++GI  +
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1557 LIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYK 1736
              + N +I+ FG  G   EAL VF  MK+  I PD+ T+ +L++   +     + + ++ 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1737 EMESVGCTPDRK 1772
            EM+  G  PD K
Sbjct: 311  EMQEQGLYPDPK 322



 Score = 99.0 bits (245), Expect = 7e-18
 Identities = 67/281 (23%), Positives = 136/281 (48%)
 Frame = +3

Query: 912  GFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEA 1091
            G  L S ++++ I  Y   G    AM L+  M+  G   +   Y  +I++ G  G   EA
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 1092 VEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISK 1271
              +F+ M   G+KP I  +N L++   + G +  A++    M E+G+  + + + I++  
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1272 LGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGRFRDAEECLLALKSEGLQLS 1451
                G+ +        MK +G+  +  +Y+ ++ +Y   G +R A   +  ++ +G+ L 
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1452 ASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNLLINAFGIAGRHLEALSVFH 1631
              ++ ++ + + + G   + ++V + M+ E I P++   N LI     AG   +AL +F 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1632 HMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVG 1754
             M+E G+ PD   + +L+       K+D +   ++ M+S G
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRG 351



 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 71/319 (22%), Positives = 144/319 (45%)
 Frame = +3

Query: 807  GVSKNQETYDFFLEYYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKA 986
            G     E ++  ++ Y + G +++   +++ M+  GF  NS  Y  LI      G   +A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 987  MGLMREMKERGLSLDRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRW 1166
              L +EM   GL    R++N ++  F + G L  AV+V   M   G+  +  T+  L+ +
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1167 HCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRS 1346
            +  AG + +      +M+E+G++ +  ++  II    + G W       E ++ +G+   
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1347 GAIYAVLVDIYGQYGRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQ 1526
              IY  ++D +G+YG   +A E    +K E ++   + + +L   + + G   + +++  
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1527 LMEDEGIEPNLIMLNLLINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGR 1706
             M+++G+ P+  +   LI+  G  G+       F +MK  G       Y  L+  + +  
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1707 KFDQVVGIYKEMESVGCTP 1763
            +F         ++S G  P
Sbjct: 371  RFQDAEVCISALKSEGLLP 389


>ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
            gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza
            sativa Japonica Group] gi|215693375|dbj|BAG88757.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa
            Japonica Group]
          Length = 492

 Score =  550 bits (1417), Expect = e-154
 Identities = 271/441 (61%), Positives = 334/441 (75%)
 Frame = +3

Query: 495  EELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEAD 674
            +E   E Y+  I++H    ++ +S+ LL+ M+A G RP+  +Y  LI  L   GRTLEA+
Sbjct: 48   QERPWESYDRGIQHHAGS-DLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAE 106

Query: 675  TIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEYY 854
             +  EM+  GL P    YN LL   L    LRLAD++L++M D GV++N+ TY   L  Y
Sbjct: 107  ALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAY 166

Query: 855  VRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDR 1034
             RAGRLED+W V+ +MKR G  L++  YS L+ LYRDNGMWKKA  L+ EM+E G+ LD 
Sbjct: 167  ARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDV 226

Query: 1035 RMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGK 1214
            ++YN +IDTFGKYG+L +A +VF+ M  EG+KPDI TWNSLIRWHC+ G+   AL FF  
Sbjct: 227  KIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAA 286

Query: 1215 MQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGR 1394
            MQE+G+YPDPKIFV IIS+LGE+GKWD IK  F  M+ RGL+ SGA+YAVLVDIYGQYG 
Sbjct: 287  MQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGH 346

Query: 1395 FRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNL 1574
            FRDA +C+ ALK+E LQLS S+FC LANAYAQQGLCEQTV VLQLME EGIEPNL+MLNL
Sbjct: 347  FRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNL 406

Query: 1575 LINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVG 1754
            LINAFG AGRHLEAL+V  H+K+ G+SPDVVTYTTLMKAF+R +KF++V  +YKEME  G
Sbjct: 407  LINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAG 466

Query: 1755 CTPDRKAREMLQTASIVLDQR 1817
            CTPDRKAREML  ASIVL+QR
Sbjct: 467  CTPDRKAREMLNDASIVLEQR 487



 Score =  103 bits (256), Expect = 4e-19
 Identities = 76/356 (21%), Positives = 148/356 (41%)
 Frame = +3

Query: 489  DGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLE 668
            DG   +   Y   +  + + G ++ S  +L  M+  G R ++  Y  L+    + G   +
Sbjct: 150  DGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKK 209

Query: 669  ADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLE 848
            A  +  EM+  G+E  VK YN L+  F + G L  A KV  +M   GV  +  T++  + 
Sbjct: 210  ATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIR 269

Query: 849  YYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSL 1028
            ++ R G  +      + M+ +G   + +++  +I    + G W +   L   M+ RGL  
Sbjct: 270  WHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKE 329

Query: 1029 DRRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFF 1208
               +Y  ++D +G+YG   +A +                        C A          
Sbjct: 330  SGAVYAVLVDIYGQYGHFRDAHD------------------------CVAA--------- 356

Query: 1209 GKMQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQY 1388
              ++ + L   P IF ++ +   ++G  +   N  + M+  G+  +  +  +L++ +G  
Sbjct: 357  --LKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTA 414

Query: 1389 GRFRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPN 1556
            GR  +A   L  +K  G+      +  L  A+ +    E+  +V + ME  G  P+
Sbjct: 415  GRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPD 470



 Score =  100 bits (248), Expect = 3e-18
 Identities = 59/252 (23%), Positives = 119/252 (47%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            G EL  + YN  I    K G++  +  +  +M A G +P+  ++  LI     +G T  A
Sbjct: 221  GVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRA 280

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
               F  M+  G+ P  K +  ++     +G      K+   M +RG+ ++   Y   ++ 
Sbjct: 281  LRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDI 340

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            Y + G   D    ++ +K +   L+  ++  L   Y   G+ ++ + +++ M+  G+  +
Sbjct: 341  YGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPN 400

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
              M N +I+ FG  G   EA+ V ++++  G+ PD++T+ +L++   +A       E + 
Sbjct: 401  LVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYK 460

Query: 1212 KMQEQGLYPDPK 1247
            +M+  G  PD K
Sbjct: 461  EMEGAGCTPDRK 472


>ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Brachypodium distachyon]
          Length = 492

 Score =  541 bits (1394), Expect = e-151
 Identities = 265/441 (60%), Positives = 333/441 (75%)
 Frame = +3

Query: 495  EELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEAD 674
            +E   E YN  I+ H    ++  S+ +L+ MEA G RP++ +Y  LI  L   GRTLEA+
Sbjct: 50   QERPWESYNRDIQPHASS-DLAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAE 108

Query: 675  TIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEYY 854
             +  EM+  GL P    YN LL   L +  L LAD++L++M D GV++N+ TY   L+ Y
Sbjct: 109  ALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAY 168

Query: 855  VRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLDR 1034
             RAGRLED+W V+ +MKR G  L++  YS L+ LYRDNGMWKKA  L+ EM+E G+ LD 
Sbjct: 169  ARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDV 228

Query: 1035 RMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGK 1214
            ++YN +IDTFGKYG+L +A  +FE M+ EGIKPDI TWN+LIRWHC+ G++  AL FF  
Sbjct: 229  KIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAA 288

Query: 1215 MQEQGLYPDPKIFVIIISKLGEEGKWDVIKNNFESMKLRGLRRSGAIYAVLVDIYGQYGR 1394
            MQE+G+YPDPKIF+ IIS+LGE+GKWD +K  F+ M+ RGL+ SGA+YAVLVDIYGQYGR
Sbjct: 289  MQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGR 348

Query: 1395 FRDAEECLLALKSEGLQLSASMFCALANAYAQQGLCEQTVKVLQLMEDEGIEPNLIMLNL 1574
            FRDA EC+ ALK+E L LS S+FC LANAYAQQGLCEQTV VLQLME EGIEPNL+MLNL
Sbjct: 349  FRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNL 408

Query: 1575 LINAFGIAGRHLEALSVFHHMKEIGISPDVVTYTTLMKAFIRGRKFDQVVGIYKEMESVG 1754
            LINAF  AGRHLEA++VF H+K+ G+SPDVVTYTTLMK F+R +KF++V  +Y EME  G
Sbjct: 409  LINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAG 468

Query: 1755 CTPDRKAREMLQTASIVLDQR 1817
            CTPDRKAREML  AS+ L+QR
Sbjct: 469  CTPDRKAREMLHDASVTLEQR 489



 Score =  103 bits (258), Expect = 2e-19
 Identities = 60/252 (23%), Positives = 119/252 (47%)
 Frame = +3

Query: 492  GEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLEA 671
            G EL  + YN  I    K G++  +  L  +M A G +P+  ++  LI     +G    A
Sbjct: 223  GVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRA 282

Query: 672  DTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLEY 851
               F  M+  G+ P  K +  ++     +G      K+  +M +RG+ ++   Y   ++ 
Sbjct: 283  LRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDI 342

Query: 852  YVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSLD 1031
            Y + GR  D    ++ +K +   L+  ++  L   Y   G+ ++ + +++ M+  G+  +
Sbjct: 343  YGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPN 402

Query: 1032 RRMYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFG 1211
              M N +I+ F   G   EAV VF++++  G+ PD++T+ +L++   +        E + 
Sbjct: 403  LVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYN 462

Query: 1212 KMQEQGLYPDPK 1247
            +M+  G  PD K
Sbjct: 463  EMERAGCTPDRK 474



 Score = 97.8 bits (242), Expect = 2e-17
 Identities = 66/317 (20%), Positives = 134/317 (42%), Gaps = 35/317 (11%)
 Frame = +3

Query: 489  DGEELSCEKYNNSIRNHCKEGEIDTSMSLLSRMEALGFRPNSMSYICLIECLGNLGRTLE 668
            DG   +   Y   +  + + G ++ S  +L  M+  G + ++  Y  L+    + G   +
Sbjct: 152  DGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKK 211

Query: 669  ADTIFQEMKLSGLEPRVKAYNVLLRVFLRKGLLRLADKVLVEMHDRGVSKNQETYDFFLE 848
            A  +  EM+  G+E  VK YN L+  F + G L  A ++  +M   G+  +  T++  + 
Sbjct: 212  ATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIR 271

Query: 849  YYVRAGRLEDTWSVISKMKRDGFSLNSRVYSKLIGLYRDNGMWKKAMGLMREMKERGLSL 1028
            ++ R G ++      + M+ +G   + +++  +I    + G W +   L  +M+ RGL  
Sbjct: 272  WHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKE 331

Query: 1029 DRRMYNSIIDTFGKYGELNEA-----------------------------------VEVF 1103
               +Y  ++D +G+YG   +A                                   V V 
Sbjct: 332  SGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVL 391

Query: 1104 ENMQREGIKPDIITWNSLIRWHCKAGDVSNALEFFGKMQEQGLYPDPKIFVIIISKLGEE 1283
            + M+ EGI+P+++  N LI     AG    A+  F  +++ G+ PD   +  ++      
Sbjct: 392  QLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRV 451

Query: 1284 GKWDVIKNNFESMKLRG 1334
             K++ +   +  M+  G
Sbjct: 452  KKFEKVSEVYNEMERAG 468