BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00022208
         (1418 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   560   e-157
ref|XP_002305144.1| transcription factor-related family protein ...   549   e-153
ref|XP_006467817.1| PREDICTED: general transcription factor IIH ...   541   e-151
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   535   e-149
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   535   e-149
ref|XP_007025658.1| Transcription factor-related isoform 2 [Theo...   535   e-149
ref|XP_007025657.1| Transcription factor-related isoform 1 [Theo...   535   e-149
ref|XP_007213816.1| hypothetical protein PRUPE_ppa005553mg [Prun...   529   e-147
ref|XP_007025660.1| Transcription factor-related isoform 4 [Theo...   519   e-144
ref|XP_007025659.1| Transcription factor-related isoform 3 [Theo...   519   e-144
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ...   515   e-143
ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arab...   514   e-143
ref|XP_006653885.1| PREDICTED: general transcription factor IIH ...   514   e-143
ref|XP_004505045.1| PREDICTED: general transcription factor IIH ...   513   e-143
ref|NP_974564.1| transcription factor-related protein [Arabidops...   513   e-142
ref|NP_193435.2| transcription factor-related protein [Arabidops...   513   e-142
ref|NP_001190745.1| transcription factor-related protein [Arabid...   513   e-142
ref|XP_003601071.1| General transcription factor IIH subunit [Me...   512   e-142
ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general tran...   512   e-142
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ...   511   e-142

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  560 bits (1442), Expect = e-157
 Identities = 274/310 (88%), Positives = 295/310 (95%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL QWECFLLQLISS Q E+ TNFSSS+MKVFQRGLL+QREKEAPRLT +GFQFLLMDT
Sbjct: 142  YALGQWECFLLQLISSTQTEKLTNFSSSLMKVFQRGLLTQREKEAPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYIMREYISNSE+RGVDP+DLISFLLELSFHVTGEAYN+NTLTE QRNTIKDL DL
Sbjct: 202  NAQLWYIMREYISNSEERGVDPADLISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLS+SL+D+SSRKQGFVVVETNFRLYAYSSSKLHCEILR
Sbjct: 262  GLVKLQQGRKESWFIPTKLATNLSMSLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNAFENGITAEQIISFLQQN+HPRVAER+P+VPENVTD
Sbjct: 322  LFSRVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVAERTPAVPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDLNRVE  PSH YDEFPSR++FEAACD+AR+ GG LWEDSKKMRLVVKAEIH+
Sbjct: 382  QIRLWETDLNRVETMPSHLYDEFPSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAEIHL 441

Query: 517  QMREYLRRQK 488
             MREYLRR K
Sbjct: 442  HMREYLRRSK 451


>ref|XP_002305144.1| transcription factor-related family protein [Populus trichocarpa]
            gi|222848108|gb|EEE85655.1| transcription factor-related
            family protein [Populus trichocarpa]
          Length = 449

 Score =  549 bits (1414), Expect = e-153
 Identities = 266/310 (85%), Positives = 294/310 (94%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YALEQWECFLL LISS QAE+PT+ SSSMMK+FQRGLLSQR+++APRLT  GFQFLLMDT
Sbjct: 140  YALEQWECFLLLLISSGQAEKPTSLSSSMMKIFQRGLLSQRDRDAPRLTEGGFQFLLMDT 199

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYI+NSE+RG +P+DLISFLLELSFHVTGEAYN+NTLTE+QRNTIKDLA+L
Sbjct: 200  NAQLWYIIREYITNSEERGTEPADLISFLLELSFHVTGEAYNMNTLTEIQRNTIKDLAEL 259

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLSVSLTDSSSRKQG+VVVETNFRLYAYSSSKLHCEILR
Sbjct: 260  GLVKLQQGRKESWFIPTKLATNLSVSLTDSSSRKQGYVVVETNFRLYAYSSSKLHCEILR 319

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFS++EYQLPNL+VGAITKESLY AFENGIT++QIISFLQQN+HPRVAER PSVPENVTD
Sbjct: 320  LFSKIEYQLPNLIVGAITKESLYTAFENGITSDQIISFLQQNAHPRVAERLPSVPENVTD 379

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWE DLNRVEITPSHFYDEFPSR+ FEAACD+AR+  G LWEDSKKMR+VVKAEIHM
Sbjct: 380  QIRLWEADLNRVEITPSHFYDEFPSRDTFEAACDFAREWNGLLWEDSKKMRVVVKAEIHM 439

Query: 517  QMREYLRRQK 488
             MRE+LR QK
Sbjct: 440  NMREFLRGQK 449


>ref|XP_006467817.1| PREDICTED: general transcription factor IIH subunit 4-like [Citrus
            sinensis]
          Length = 450

 Score =  541 bits (1394), Expect = e-151
 Identities = 259/309 (83%), Positives = 293/309 (94%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YA+ QWECFLLQLISS QAERPTNFSSSMMKVFQRGLLS+R+KEAPRLT +GFQFLLMDT
Sbjct: 140  YAIGQWECFLLQLISSTQAERPTNFSSSMMKVFQRGLLSRRDKEAPRLTESGFQFLLMDT 199

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNS++RG++ +DLISFLLELSFHV GEAYNLNTL+E+Q++ IKD ADL
Sbjct: 200  NAQLWYIVREYISNSQERGINQADLISFLLELSFHVAGEAYNLNTLSEIQKSMIKDFADL 259

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK++WFIPTKL TNLS+SLTDSS+RK+GF+VVETNFR+YAYS+SKLHCEILR
Sbjct: 260  GLVKLQQGRKENWFIPTKLATNLSMSLTDSSARKEGFIVVETNFRMYAYSTSKLHCEILR 319

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFS+VEYQLPNL+VGAITKESLYNAFENGITAEQIISFLQQN+HPRVA+R PSVPENV D
Sbjct: 320  LFSKVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVADRMPSVPENVCD 379

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWE+DLNRVE+TP+H+YDEFPSR++FEAACDYARD  G LWED KKMRLVVKAEIHM
Sbjct: 380  QIRLWESDLNRVEMTPAHYYDEFPSRDVFEAACDYARDQSGLLWEDPKKMRLVVKAEIHM 439

Query: 517  QMREYLRRQ 491
             MRE+LR Q
Sbjct: 440  HMREFLRGQ 448


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
            sativus]
          Length = 451

 Score =  535 bits (1378), Expect = e-149
 Identities = 257/310 (82%), Positives = 294/310 (94%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL+QWECFLLQLI+S QAE+P+N SSS+MKVFQ+GLLSQR+KEAPRLT +GFQFLLM+T
Sbjct: 142  YALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMET 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISN+E+RGVDP+DLISFLLELSFHVTGEAY+++TL++ QR  IKDLADL
Sbjct: 202  NAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLS+SL DSSSRK GFVVVETNFR+YAYS+SKLHCEILR
Sbjct: 262  GLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSR+EYQLPNL+VGAITKESLYNAF+NGITAEQI++FLQQN+HPRVAER PSVPENVTD
Sbjct: 322  LFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWE+DLNRV+ITP+HFYDEFPSRE+FEAACDYAR+  G LWEDSK +RLVVKA+IH 
Sbjct: 382  QIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHT 441

Query: 517  QMREYLRRQK 488
             MRE+LRRQK
Sbjct: 442  HMREHLRRQK 451


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
            gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
            [Ricinus communis]
          Length = 451

 Score =  535 bits (1378), Expect = e-149
 Identities = 259/310 (83%), Positives = 291/310 (93%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL QWECFLL LI+S  AER TNFSSSMMK+FQRGLL+QR+KEAPRLT +GFQFLLMDT
Sbjct: 142  YALGQWECFLLHLINSGHAERSTNFSSSMMKIFQRGLLTQRDKEAPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE+RG+D +DLISFLLELSFH+TGEAYN+  LTE QRN IKDLADL
Sbjct: 202  NAQLWYIIREYISNSEERGLDSADLISFLLELSFHITGEAYNMIMLTEFQRNMIKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLS+SLTDSSSRKQGFVVVETNFR+YAYS+SKLHCEI+R
Sbjct: 262  GLVKLQQGRKESWFIPTKLATNLSMSLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEIMR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGA+TKESLY+AFENGITAEQIISFLQQN+HPRVAER PSVPENVTD
Sbjct: 322  LFSRVEYQLPNLVVGAMTKESLYSAFENGITAEQIISFLQQNAHPRVAERIPSVPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWE+D+NRVE+TP+H YDEFPSR++FEAAC++ARD  G LWEDSK+MR+VVKAEIH+
Sbjct: 382  QIRLWESDMNRVEMTPAHLYDEFPSRDVFEAACNFARDWNGLLWEDSKRMRMVVKAEIHL 441

Query: 517  QMREYLRRQK 488
             MREYLR QK
Sbjct: 442  NMREYLRGQK 451


>ref|XP_007025658.1| Transcription factor-related isoform 2 [Theobroma cacao]
            gi|508781024|gb|EOY28280.1| Transcription factor-related
            isoform 2 [Theobroma cacao]
          Length = 412

 Score =  535 bits (1377), Expect = e-149
 Identities = 263/309 (85%), Positives = 289/309 (93%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YA EQWECFLLQLISS QAE+PTNFSSSMM++FQRGLL QREKEAPRLT +GFQFLLMDT
Sbjct: 102  YAHEQWECFLLQLISSGQAEKPTNFSSSMMRIFQRGLLCQREKEAPRLTESGFQFLLMDT 161

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE++GVD +DLI+FLLELSFH TGEAYN+NTLT+ QR  IKDL+DL
Sbjct: 162  NAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHTTGEAYNMNTLTDDQRAMIKDLSDL 221

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSLTDSSSRKQGFVVVETNFR+YAYSSSKLHCEILR
Sbjct: 222  GLVKLQQGRKDSWFIPTKLATNLSVSLTDSSSRKQGFVVVETNFRMYAYSSSKLHCEILR 281

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNAFENGI AEQII+FLQQN+HPRVAE+ PSVPENVTD
Sbjct: 282  LFSRVEYQLPNLIVGAITKESLYNAFENGIAAEQIITFLQQNAHPRVAEKLPSVPENVTD 341

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDLNRVE+TP+HFYD+FPSR++FEAA D AR + G LWED+KKMR+VVKAEIHM
Sbjct: 342  QIRLWETDLNRVEMTPAHFYDDFPSRDVFEAASDLARVHCGLLWEDAKKMRMVVKAEIHM 401

Query: 517  QMREYLRRQ 491
             MRE LR Q
Sbjct: 402  LMREQLRGQ 410


>ref|XP_007025657.1| Transcription factor-related isoform 1 [Theobroma cacao]
            gi|508781023|gb|EOY28279.1| Transcription factor-related
            isoform 1 [Theobroma cacao]
          Length = 451

 Score =  535 bits (1377), Expect = e-149
 Identities = 263/309 (85%), Positives = 289/309 (93%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YA EQWECFLLQLISS QAE+PTNFSSSMM++FQRGLL QREKEAPRLT +GFQFLLMDT
Sbjct: 141  YAHEQWECFLLQLISSGQAEKPTNFSSSMMRIFQRGLLCQREKEAPRLTESGFQFLLMDT 200

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE++GVD +DLI+FLLELSFH TGEAYN+NTLT+ QR  IKDL+DL
Sbjct: 201  NAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHTTGEAYNMNTLTDDQRAMIKDLSDL 260

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSLTDSSSRKQGFVVVETNFR+YAYSSSKLHCEILR
Sbjct: 261  GLVKLQQGRKDSWFIPTKLATNLSVSLTDSSSRKQGFVVVETNFRMYAYSSSKLHCEILR 320

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNAFENGI AEQII+FLQQN+HPRVAE+ PSVPENVTD
Sbjct: 321  LFSRVEYQLPNLIVGAITKESLYNAFENGIAAEQIITFLQQNAHPRVAEKLPSVPENVTD 380

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDLNRVE+TP+HFYD+FPSR++FEAA D AR + G LWED+KKMR+VVKAEIHM
Sbjct: 381  QIRLWETDLNRVEMTPAHFYDDFPSRDVFEAASDLARVHCGLLWEDAKKMRMVVKAEIHM 440

Query: 517  QMREYLRRQ 491
             MRE LR Q
Sbjct: 441  LMREQLRGQ 449


>ref|XP_007213816.1| hypothetical protein PRUPE_ppa005553mg [Prunus persica]
            gi|462409681|gb|EMJ15015.1| hypothetical protein
            PRUPE_ppa005553mg [Prunus persica]
          Length = 455

 Score =  529 bits (1363), Expect = e-147
 Identities = 263/313 (84%), Positives = 290/313 (92%), Gaps = 3/313 (0%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            +AL QWECFLLQLI+S+Q ERP+N SSSMMK+FQRGLLSQR+KEAPRLT +GFQFLLMDT
Sbjct: 142  FALGQWECFLLQLINSSQIERPSNISSSMMKIFQRGLLSQRDKEAPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE+RGVD +DLISFLLELSFHVTGEAYN+NTLTEVQ+NTIKDLADL
Sbjct: 202  NAQLWYIIREYISNSEERGVDSADLISFLLELSFHVTGEAYNINTLTEVQKNTIKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPT+L TNLSVSLTDSSSRKQGFVVVETNFRLYAYS+SKLHCEILR
Sbjct: 262  GLVKLQQGRKDSWFIPTRLATNLSVSLTDSSSRKQGFVVVETNFRLYAYSTSKLHCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLY+AFENGITA+QIISFLQQN+HPRVAER PSVPENVTD
Sbjct: 322  LFSRVEYQLPNLIVGAITKESLYSAFENGITADQIISFLQQNAHPRVAERVPSVPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLW---EDSKKMRLVVKAE 527
            QIRLWETDLNRVE+TP++ YD FPSR++FE A D+AR     LW   EDSKKM LVVKAE
Sbjct: 382  QIRLWETDLNRVEMTPAYHYDGFPSRDLFEGASDFARGYNALLWEDPEDSKKMSLVVKAE 441

Query: 526  IHMQMREYLRRQK 488
             H+ MREYL RQ+
Sbjct: 442  NHVHMREYLSRQR 454


>ref|XP_007025660.1| Transcription factor-related isoform 4 [Theobroma cacao]
            gi|508781026|gb|EOY28282.1| Transcription factor-related
            isoform 4 [Theobroma cacao]
          Length = 445

 Score =  519 bits (1336), Expect = e-144
 Identities = 258/309 (83%), Positives = 283/309 (91%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YA EQWECFLLQLISS QAE+PTNFSSSMM++FQRGLL QREKEAPRLT +GFQFLLMDT
Sbjct: 141  YAHEQWECFLLQLISSGQAEKPTNFSSSMMRIFQRGLLCQREKEAPRLTESGFQFLLMDT 200

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE++GVD +DLI+FLLELSFH TGEAYN+NTLT+ QR  IKDL+DL
Sbjct: 201  NAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHTTGEAYNMNTLTDDQRAMIKDLSDL 260

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSLTDSSSRKQGFVVVETNFR+YAYSSSKLHCEILR
Sbjct: 261  GLVKLQQGRKDSWFIPTKLATNLSVSLTDSSSRKQGFVVVETNFRMYAYSSSKLHCEILR 320

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNAFENGI AE      QQN+HPRVAE+ PSVPENVTD
Sbjct: 321  LFSRVEYQLPNLIVGAITKESLYNAFENGIAAE------QQNAHPRVAEKLPSVPENVTD 374

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDLNRVE+TP+HFYD+FPSR++FEAA D AR + G LWED+KKMR+VVKAEIHM
Sbjct: 375  QIRLWETDLNRVEMTPAHFYDDFPSRDVFEAASDLARVHCGLLWEDAKKMRMVVKAEIHM 434

Query: 517  QMREYLRRQ 491
             MRE LR Q
Sbjct: 435  LMREQLRGQ 443


>ref|XP_007025659.1| Transcription factor-related isoform 3 [Theobroma cacao]
            gi|508781025|gb|EOY28281.1| Transcription factor-related
            isoform 3 [Theobroma cacao]
          Length = 406

 Score =  519 bits (1336), Expect = e-144
 Identities = 258/309 (83%), Positives = 283/309 (91%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YA EQWECFLLQLISS QAE+PTNFSSSMM++FQRGLL QREKEAPRLT +GFQFLLMDT
Sbjct: 102  YAHEQWECFLLQLISSGQAEKPTNFSSSMMRIFQRGLLCQREKEAPRLTESGFQFLLMDT 161

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE++GVD +DLI+FLLELSFH TGEAYN+NTLT+ QR  IKDL+DL
Sbjct: 162  NAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHTTGEAYNMNTLTDDQRAMIKDLSDL 221

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSLTDSSSRKQGFVVVETNFR+YAYSSSKLHCEILR
Sbjct: 222  GLVKLQQGRKDSWFIPTKLATNLSVSLTDSSSRKQGFVVVETNFRMYAYSSSKLHCEILR 281

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNAFENGI AE      QQN+HPRVAE+ PSVPENVTD
Sbjct: 282  LFSRVEYQLPNLIVGAITKESLYNAFENGIAAE------QQNAHPRVAEKLPSVPENVTD 335

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDLNRVE+TP+HFYD+FPSR++FEAA D AR + G LWED+KKMR+VVKAEIHM
Sbjct: 336  QIRLWETDLNRVEMTPAHFYDDFPSRDVFEAASDLARVHCGLLWEDAKKMRMVVKAEIHM 395

Query: 517  QMREYLRRQ 491
             MRE LR Q
Sbjct: 396  LMREQLRGQ 404


>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
            lycopersicum]
          Length = 453

 Score =  515 bits (1326), Expect = e-143
 Identities = 244/311 (78%), Positives = 292/311 (93%), Gaps = 1/311 (0%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQRE-KEAPRLTVNGFQFLLMD 1241
            YA+EQWECFLL LISS++A + TN SSSMMK+FQRGLLSQR+ +E PRLT +GFQFLLMD
Sbjct: 142  YAVEQWECFLLNLISSSEAGKTTNISSSMMKIFQRGLLSQRDDREPPRLTESGFQFLLMD 201

Query: 1240 TNAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLAD 1061
            TNAQLWYI+REYI+N+E+RGVD +DLI+FLLELSFHVTG+AYN NT+T++QR+ IKDL+D
Sbjct: 202  TNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSD 261

Query: 1060 LGLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEIL 881
            LGL+KLQQGRK+SWFIPTKL TNLS+SL D+++RKQGF+V+ETNFRLYAYS+SKLHCEIL
Sbjct: 262  LGLVKLQQGRKESWFIPTKLATNLSISLADTTTRKQGFIVIETNFRLYAYSTSKLHCEIL 321

Query: 880  RLFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVT 701
            RLF+RVEYQLPNL+VGAI KESLY AF+NGIT+EQI+SFLQQN+HPRVAER PSVPENVT
Sbjct: 322  RLFARVEYQLPNLIVGAINKESLYKAFQNGITSEQIVSFLQQNAHPRVAERIPSVPENVT 381

Query: 700  DQIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIH 521
            DQIRLWE+DLNRVE+TP+HFYDEFPS+++FEAACD+AR+ GG LWEDSK+MRLVVKA+I 
Sbjct: 382  DQIRLWESDLNRVEMTPAHFYDEFPSKDVFEAACDFAREYGGLLWEDSKRMRLVVKADIL 441

Query: 520  MQMREYLRRQK 488
             +M+E+LRRQK
Sbjct: 442  AEMKEFLRRQK 452


>ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arabidopsis lyrata subsp.
            lyrata] gi|297313927|gb|EFH44350.1| hypothetical protein
            ARALYDRAFT_493174 [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score =  514 bits (1325), Expect = e-143
 Identities = 244/309 (78%), Positives = 285/309 (92%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL+QWECFLLQLI+S Q E+ T  SSSMM++FQRGLLSQR+K+ PRLT +GFQFLLMDT
Sbjct: 142  YALKQWECFLLQLINSGQGEKLTGISSSMMRIFQRGLLSQRDKDGPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISN+E+R V+P+DLISFLLELSFHVTGEAYN NTLTEVQ NT+KDLADL
Sbjct: 202  NAQLWYIIREYISNAEERDVEPADLISFLLELSFHVTGEAYNSNTLTEVQNNTLKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSL DSS+RK+GFVV+ETNFR+YAYS+SKL CEILR
Sbjct: 262  GLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LF+R+EYQLPNL+  AITKESLYNAF+NGIT++QII+FLQQNSHPR A+R PS+PENVTD
Sbjct: 322  LFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDL R+E+T +HFYDEFPS+++FEAACD+AR+ GG LWEDSK+MRLVVK+E+H 
Sbjct: 382  QIRLWETDLKRIEMTQAHFYDEFPSKDVFEAACDFAREWGGLLWEDSKRMRLVVKSEVHN 441

Query: 517  QMREYLRRQ 491
            QMRE+L  Q
Sbjct: 442  QMREFLHNQ 450


>ref|XP_006653885.1| PREDICTED: general transcription factor IIH subunit 4-like [Oryza
            brachyantha]
          Length = 451

 Score =  514 bits (1324), Expect = e-143
 Identities = 247/308 (80%), Positives = 284/308 (92%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YALEQWECFLLQLI+S+Q ER T+FSSSMM+ FQRGLLS R+ EAPRLT NGFQFLLM+T
Sbjct: 142  YALEQWECFLLQLINSSQVERGTSFSSSMMRTFQRGLLSSRDGEAPRLTENGFQFLLMET 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYIMREYIS+SE+RGVDP++LISFLLELSFH  GEAY+LNTLT+VQRN I+DLA+L
Sbjct: 202  NAQLWYIMREYISSSEERGVDPTELISFLLELSFHTLGEAYSLNTLTDVQRNAIRDLAEL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLS SL+DSSS K+GFVVVETNFR+YAYS+SKLHCEILR
Sbjct: 262  GLVKLQQGRKDSWFIPTKLATNLSASLSDSSSSKEGFVVVETNFRMYAYSTSKLHCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VG+ITKESLY AFENGITAEQIISFLQQN+HPRVA++ P+VPENVTD
Sbjct: 322  LFSRVEYQLPNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRVADKIPAVPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETD NRVE+T SH Y++FPS+++FE  CDYARD+G  LWED+KKMRL+V+ E H 
Sbjct: 382  QIRLWETDRNRVEMTLSHLYEDFPSKDMFEQCCDYARDHGCLLWEDAKKMRLIVRVEFHP 441

Query: 517  QMREYLRR 494
            +MRE+LRR
Sbjct: 442  EMREFLRR 449


>ref|XP_004505045.1| PREDICTED: general transcription factor IIH subunit 4-like [Cicer
            arietinum]
          Length = 451

 Score =  513 bits (1322), Expect = e-143
 Identities = 248/310 (80%), Positives = 285/310 (91%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YALEQWECFLLQLIS +  E+  N SSS+MKVFQR LLSQR+KEAP+LT +GFQFLLMDT
Sbjct: 142  YALEQWECFLLQLISPSHVEKTLNISSSLMKVFQRRLLSQRDKEAPKLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYISNSE+RGVD  DLISF+LELSFHV GEAYN+NTLT+ QRN IKDLADL
Sbjct: 202  NAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIGEAYNINTLTDFQRNIIKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLSVSLT+SSSRK+GFVVVETNFR+YAYS+SKLHCEILR
Sbjct: 262  GLVKLQQGRKESWFIPTKLATNLSVSLTESSSRKEGFVVVETNFRVYAYSTSKLHCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNA ENGITAEQI+SFL+QN+HPRVA+R P+VPENVTD
Sbjct: 322  LFSRVEYQLPNLIVGAITKESLYNALENGITAEQIVSFLRQNAHPRVAQRIPAVPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWE+DLNRVE+T +++YDEFPSR++FE ACD AR+  G LWE+SKKM LVVK+E+H 
Sbjct: 382  QIRLWESDLNRVEMTEAYYYDEFPSRDVFEGACDCAREWNGLLWENSKKMHLVVKSEVHS 441

Query: 517  QMREYLRRQK 488
             +R++LRRQK
Sbjct: 442  YVRDFLRRQK 451


>ref|NP_974564.1| transcription factor-related protein [Arabidopsis thaliana]
            gi|332658438|gb|AEE83838.1| transcription factor-related
            protein [Arabidopsis thaliana]
          Length = 462

 Score =  513 bits (1320), Expect = e-142
 Identities = 244/309 (78%), Positives = 284/309 (91%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL+QWECFLLQLI+S Q E+ T  SSSMMK+FQRGLLSQR+K+ PRLT +GFQFLLMDT
Sbjct: 142  YALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLSQRDKDGPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYI N+E+R VDP+DLISFLLELSFHVTG+AYNLNTLTEVQ NT+KDLADL
Sbjct: 202  NAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQAYNLNTLTEVQNNTLKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSL DSS+RK+GFVV+ETNFR+YAYS+SKL CEILR
Sbjct: 262  GLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LF+R+EYQLPNL+  AITKESLYNAF+NGIT++QII+FLQQNSHPR A+R PS+PENVTD
Sbjct: 322  LFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDL R+E+T +HFYDEFPS+++FEAACD+AR+  G LWEDSK+MRLVVK+E+H 
Sbjct: 382  QIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACDFAREWRGLLWEDSKRMRLVVKSEVHN 441

Query: 517  QMREYLRRQ 491
            QMRE+L  Q
Sbjct: 442  QMREFLHTQ 450


>ref|NP_193435.2| transcription factor-related protein [Arabidopsis thaliana]
            gi|51969678|dbj|BAD43531.1| unnamed protein product
            [Arabidopsis thaliana] gi|115646777|gb|ABJ17114.1|
            At4g17020 [Arabidopsis thaliana]
            gi|332658439|gb|AEE83839.1| transcription factor-related
            protein [Arabidopsis thaliana]
          Length = 452

 Score =  513 bits (1320), Expect = e-142
 Identities = 244/309 (78%), Positives = 284/309 (91%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL+QWECFLLQLI+S Q E+ T  SSSMMK+FQRGLLSQR+K+ PRLT +GFQFLLMDT
Sbjct: 142  YALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLSQRDKDGPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYI N+E+R VDP+DLISFLLELSFHVTG+AYNLNTLTEVQ NT+KDLADL
Sbjct: 202  NAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQAYNLNTLTEVQNNTLKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSL DSS+RK+GFVV+ETNFR+YAYS+SKL CEILR
Sbjct: 262  GLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LF+R+EYQLPNL+  AITKESLYNAF+NGIT++QII+FLQQNSHPR A+R PS+PENVTD
Sbjct: 322  LFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDL R+E+T +HFYDEFPS+++FEAACD+AR+  G LWEDSK+MRLVVK+E+H 
Sbjct: 382  QIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACDFAREWRGLLWEDSKRMRLVVKSEVHN 441

Query: 517  QMREYLRRQ 491
            QMRE+L  Q
Sbjct: 442  QMREFLHTQ 450


>ref|NP_001190745.1| transcription factor-related protein [Arabidopsis thaliana]
            gi|332658440|gb|AEE83840.1| transcription factor-related
            protein [Arabidopsis thaliana]
          Length = 482

 Score =  513 bits (1320), Expect = e-142
 Identities = 244/309 (78%), Positives = 284/309 (91%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YAL+QWECFLLQLI+S Q E+ T  SSSMMK+FQRGLLSQR+K+ PRLT +GFQFLLMDT
Sbjct: 142  YALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLSQRDKDGPRLTESGFQFLLMDT 201

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYI N+E+R VDP+DLISFLLELSFHVTG+AYNLNTLTEVQ NT+KDLADL
Sbjct: 202  NAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQAYNLNTLTEVQNNTLKDLADL 261

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRKDSWFIPTKL TNLSVSL DSS+RK+GFVV+ETNFR+YAYS+SKL CEILR
Sbjct: 262  GLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILR 321

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LF+R+EYQLPNL+  AITKESLYNAF+NGIT++QII+FLQQNSHPR A+R PS+PENVTD
Sbjct: 322  LFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTD 381

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWETDL R+E+T +HFYDEFPS+++FEAACD+AR+  G LWEDSK+MRLVVK+E+H 
Sbjct: 382  QIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACDFAREWRGLLWEDSKRMRLVVKSEVHN 441

Query: 517  QMREYLRRQ 491
            QMRE+L  Q
Sbjct: 442  QMREFLHTQ 450


>ref|XP_003601071.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355490119|gb|AES71322.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 452

 Score =  512 bits (1319), Expect = e-142
 Identities = 245/310 (79%), Positives = 286/310 (92%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            YALEQWECFLLQLIS +  ++  N SSS+MKVFQR LLSQR++EAP+LT +GFQFLLMDT
Sbjct: 143  YALEQWECFLLQLISPSHVDKTLNISSSLMKVFQRRLLSQRDREAPKLTESGFQFLLMDT 202

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYI+NSE+RGVD  DLISF+LELSFHV GEAYN+NTLTE QRN IKDLADL
Sbjct: 203  NAQLWYIIREYITNSEERGVDAGDLISFMLELSFHVIGEAYNINTLTEFQRNIIKDLADL 262

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLSVS+T+SSSRK+GFVVVETNFR+YAYS+SKLHCEILR
Sbjct: 263  GLVKLQQGRKESWFIPTKLATNLSVSMTESSSRKEGFVVVETNFRVYAYSTSKLHCEILR 322

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LFSRVEYQLPNL+VGAITKESLYNAF+NGITA+QI+SFL+QN+HPRVA+R P+VPENVTD
Sbjct: 323  LFSRVEYQLPNLIVGAITKESLYNAFDNGITADQIVSFLRQNAHPRVAQRVPAVPENVTD 382

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIHM 518
            QIRLWE+DLNRVE+T +++YDEFPSR++FE ACD AR+  G LWEDSKKM LVVK+E+H 
Sbjct: 383  QIRLWESDLNRVEMTEAYYYDEFPSRDVFEGACDCAREWSGLLWEDSKKMHLVVKSEVHT 442

Query: 517  QMREYLRRQK 488
             +R++LRRQK
Sbjct: 443  YVRDFLRRQK 452


>ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
            subunit 4-like [Fragaria vesca subsp. vesca]
          Length = 453

 Score =  512 bits (1318), Expect = e-142
 Identities = 250/313 (79%), Positives = 287/313 (91%), Gaps = 3/313 (0%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQREKEAPRLTVNGFQFLLMDT 1238
            +ALEQWECFLLQLI+S+Q +RP+N SSSMMK FQRGL++QR++EAPRLT +GFQFLLMDT
Sbjct: 141  FALEQWECFLLQLINSSQTDRPSNISSSMMKTFQRGLVTQRDREAPRLTESGFQFLLMDT 200

Query: 1237 NAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLADL 1058
            NAQLWYI+REYI++SE+RG+D +DLI+FLLELSFHVTGEAYN+NTLTE+Q+NTIKD  DL
Sbjct: 201  NAQLWYIIREYITSSEERGIDSADLIAFLLELSFHVTGEAYNINTLTELQKNTIKDFTDL 260

Query: 1057 GLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEILR 878
            GL+KLQQGRK+SWFIPTKL TNLSVSLTD+SSRKQGFVVVETNFRLYAYSSSKLHCEILR
Sbjct: 261  GLVKLQQGRKESWFIPTKLATNLSVSLTDTSSRKQGFVVVETNFRLYAYSSSKLHCEILR 320

Query: 877  LFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVTD 698
            LF+RVEYQLPNL+VGAITKESLY AF+N ITAEQIISFL+QN+HPRVAER PSVPENVTD
Sbjct: 321  LFARVEYQLPNLIVGAITKESLYGAFDNCITAEQIISFLKQNAHPRVAERIPSVPENVTD 380

Query: 697  QIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWE---DSKKMRLVVKAE 527
            QIRLWETDLNRVE+T ++ YDEFPSR++F+ A DYAR   G LWE   DSKKMRLVV++E
Sbjct: 381  QIRLWETDLNRVEMTNAYIYDEFPSRDLFDGAVDYARSYNGLLWEAPDDSKKMRLVVRSE 440

Query: 526  IHMQMREYLRRQK 488
             H+ MREYL  QK
Sbjct: 441  NHVHMREYLSGQK 453


>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
            tuberosum]
          Length = 453

 Score =  511 bits (1316), Expect = e-142
 Identities = 242/311 (77%), Positives = 290/311 (93%), Gaps = 1/311 (0%)
 Frame = -2

Query: 1417 YALEQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLSQRE-KEAPRLTVNGFQFLLMD 1241
            YA+EQWECFLL LISS++  + TN SSSMMK+FQRGLLSQR+ +E PRLT +GFQFLLMD
Sbjct: 142  YAVEQWECFLLNLISSSEGGKTTNISSSMMKIFQRGLLSQRDDREPPRLTESGFQFLLMD 201

Query: 1240 TNAQLWYIMREYISNSEDRGVDPSDLISFLLELSFHVTGEAYNLNTLTEVQRNTIKDLAD 1061
            TNAQLWYI+REYI+N+E+RGVD +DLI+FLLELSFHVTG+AYN NT+T++QR+ IKDL+D
Sbjct: 202  TNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSD 261

Query: 1060 LGLIKLQQGRKDSWFIPTKLVTNLSVSLTDSSSRKQGFVVVETNFRLYAYSSSKLHCEIL 881
            LGL+KLQQGRK+SWFIPTKL TNLS+SL D++SRKQGF+V+ETNFRLYAYS+SKLHCEIL
Sbjct: 262  LGLVKLQQGRKESWFIPTKLATNLSISLADTTSRKQGFIVIETNFRLYAYSTSKLHCEIL 321

Query: 880  RLFSRVEYQLPNLLVGAITKESLYNAFENGITAEQIISFLQQNSHPRVAERSPSVPENVT 701
            RLF+RVEYQLPNL+VGAI KESLY AF+NGIT++QI+SFLQQN+HPRVAER PSVPENVT
Sbjct: 322  RLFARVEYQLPNLIVGAINKESLYKAFQNGITSDQIVSFLQQNAHPRVAERIPSVPENVT 381

Query: 700  DQIRLWETDLNRVEITPSHFYDEFPSREIFEAACDYARDNGGFLWEDSKKMRLVVKAEIH 521
            DQIRLWE+DLNRVE+ P+HFYDEFPS+++FEAACD+AR+ GG LWEDSK+MRLVVKA+I 
Sbjct: 382  DQIRLWESDLNRVEMEPAHFYDEFPSKDVFEAACDFAREYGGLLWEDSKRMRLVVKADIL 441

Query: 520  MQMREYLRRQK 488
             +M+E+LRRQK
Sbjct: 442  TEMKEFLRRQK 452