BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00022012
         (588 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat...   263   2e-68
ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat...   251   1e-64
ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat...   250   2e-64
ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat...   248   7e-64
emb|CBI29893.3| unnamed protein product [Vitis vinifera]              246   4e-63
ref|XP_006363843.1| PREDICTED: putative pentatricopeptide repeat...   245   7e-63
ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat...   244   1e-62
ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat...   244   2e-62
ref|XP_007145648.1| hypothetical protein PHAVU_007G256700g [Phas...   240   2e-61
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat...   240   2e-61
ref|NP_187990.1| pentatricopeptide repeat-containing protein [Ar...   238   7e-61
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...   236   3e-60
ref|XP_006407172.1| hypothetical protein EUTSA_v10020299mg [Eutr...   236   3e-60
ref|XP_002882843.1| pentatricopeptide repeat-containing protein ...   236   5e-60
ref|XP_007028899.1| Pentatricopeptide repeat superfamily protein...   234   1e-59
ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Caps...   233   2e-59
ref|XP_002322694.1| pentatricopeptide repeat-containing family p...   232   5e-59
ref|XP_007203274.1| hypothetical protein PRUPE_ppa025467mg [Prun...   231   1e-58
ref|XP_006850136.1| hypothetical protein AMTR_s00022p00232590 [A...   227   2e-57
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t...   227   2e-57

>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  263 bits (673), Expect = 2e-68
 Identities = 136/184 (73%), Positives = 151/184 (82%)
 Frame = -3

Query: 553  KNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
            K L  N QLKEALLEM I G  V+F+GYDS+LT C++Q AIREGQRVHAHMIKT Y PP 
Sbjct: 453  KTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPV 512

Query: 373  YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
            YL TRLIVLY KC  L DARRVLD MPERNVVSWTAMIS YSQRGY +EAL LF +ML +
Sbjct: 513  YLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS 572

Query: 193  GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
            GT PNEFTFATVLTS TS+  F LGRQ+HSL+IK +FE+HIFVGSSLLDMYAKAG+I EA
Sbjct: 573  GTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEA 632

Query: 13   LIIF 2
              +F
Sbjct: 633  RRVF 636



 Score =  119 bits (297), Expect = 8e-25
 Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 3/184 (1%)
 Frame = -3

Query: 544  SINGQLKEAL---LEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
            S  G   EAL   +EM + G       + ++LT C +    + G+++H+ +IKT +    
Sbjct: 554  SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI 613

Query: 373  YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
            ++ + L+ +Y K   + +ARRV DG+PER+VVS TA+IS Y+Q G   EALDLF ++   
Sbjct: 614  FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 673

Query: 193  GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
            G   N  T+A+VLT+ +     + GRQVHS +++     ++ + +SL+DMY+K G +  +
Sbjct: 674  GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 733

Query: 13   LIIF 2
              IF
Sbjct: 734  RRIF 737



 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472  YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
            Y S+LT      A+  G++VH+H+++        L   LI +Y+KC SL  +RR+ D MP
Sbjct: 682  YASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 741

Query: 292  ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
            ER V+SW AM+  YS+ G   EA++LF  M E   + P+  TF  VL+  +   + + G 
Sbjct: 742  ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 801

Query: 115  QVHSLLI--KFNFETHIFVGSSLLDMYAKAGRIQEA 14
            ++   ++  K  FE  I     ++D++ +AGR++EA
Sbjct: 802  EIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 837


>ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 637

 Score =  251 bits (640), Expect = 1e-64
 Identities = 126/182 (69%), Positives = 146/182 (80%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           L  NGQL+EAL+EM++ G  +KFEGY +LL  CV +RA REGQRVHAHMIKT YLPP +L
Sbjct: 39  LCSNGQLREALVEMTVQGLAMKFEGYYTLLNECVTRRAFREGQRVHAHMIKTCYLPPVHL 98

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRLIV Y  CD L DARRVLD MP+RNVVSWTAMISAYS+RGY  EA DLF QML +  
Sbjct: 99  QTRLIVFYNNCDCLRDARRVLDEMPQRNVVSWTAMISAYSKRGYAAEATDLFLQMLRSEE 158

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFAT+LTS T +  F+LGRQ+HSL+IK  +E+HIFVGSSLLDMYAKAGR+ EA  
Sbjct: 159 EPNEFTFATILTSCTGSWGFDLGRQIHSLIIKTKYESHIFVGSSLLDMYAKAGRMLEARR 218

Query: 7   IF 2
           +F
Sbjct: 219 VF 220



 Score =  116 bits (291), Expect = 4e-24
 Identities = 57/157 (36%), Positives = 98/157 (62%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C        G+++H+ +IKT Y    ++ + L+ +Y K   + +ARRV D +P
Sbjct: 165 FATILTSCTGSWGFDLGRQIHSLIIKTKYESHIFVGSSLLDMYAKAGRMLEARRVFDSLP 224

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q+G   EAL+LF Q+   G   N  T+A+VLT+ +     +LGRQ
Sbjct: 225 ERDVVSCTAIISGYAQQGLDEEALELFRQLQREGMTSNYVTYASVLTALSGLAALDLGRQ 284

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VH+ +++    + + + +SL+DMY+K G++  +  +F
Sbjct: 285 VHNHVLRREVPSFVVLQNSLIDMYSKCGKLSYSRRVF 321



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           Y S+LT      A+  G++VH H+++        L   LI +Y+KC  L+ +RRV D MP
Sbjct: 266 YASVLTALSGLAALDLGRQVHNHVLRREVPSFVVLQNSLIDMYSKCGKLSYSRRVFDTMP 325

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
           ER V+SW AM+  YS+ G   E + LF  M E   + P+  TF  VL+  +   + + G 
Sbjct: 326 ERTVISWNAMLVGYSKHGMGNEVVKLFKLMKEENKIRPDSVTFLAVLSGCSHGGMEDRGL 385

Query: 115 QVHSLL--IKFNFETHIFVGSSLLDMYAKAGRIQEA 14
           +    +   K   E  +     ++D+  ++GR++EA
Sbjct: 386 EFFYEMGKGKNGIEPELEHYGCVVDLLGRSGRVEEA 421


>ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  250 bits (638), Expect = 2e-64
 Identities = 126/184 (68%), Positives = 147/184 (79%)
 Frame = -3

Query: 553 KNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
           K L  +GQLKEALL+M+ILG  VKFEGYDS+L  CV+QRAIREGQRVH HMIKT YLP  
Sbjct: 38  KTLCSSGQLKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSV 97

Query: 373 YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
           YL TRLIVLY KCD L DAR + D MP+RNVVSWTAMISAYSQRG+  EAL+LF +ML +
Sbjct: 98  YLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRS 157

Query: 193 GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
            T PN FTFAT+LTS   +  F  GRQ+HS+ IK N+E+H+FVGSSLLDMYAK+GRI +A
Sbjct: 158 DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDA 217

Query: 13  LIIF 2
             +F
Sbjct: 218 HGVF 221



 Score =  103 bits (256), Expect = 5e-20
 Identities = 55/157 (35%), Positives = 91/157 (57%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C        G+++H+  IK +Y    ++ + L+ +Y K   + DA  V   +P
Sbjct: 166 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VV+ TA+IS Y+Q G   EAL LF Q+   G   N  T+A+VLT+ +     N G+Q
Sbjct: 226 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VHS +++    +++ + +SL+DMY+K G +  A  IF
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIF 322



 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           Y S+LT      A+  G++VH+H++++       L   LI +Y+KC ++  ARR+ D MP
Sbjct: 267 YASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 326

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
           ER  +SW AM+  YS+ G   E L+LF  M E   + P+  T+  VL+  +   + ++G 
Sbjct: 327 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 386

Query: 115 QVHSLLI--KFNFETHIFVGSSLLDMYAKAGRIQEA 14
           ++   ++  K   E  I     ++D+  +AGR++EA
Sbjct: 387 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422


>ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  248 bits (634), Expect = 7e-64
 Identities = 124/184 (67%), Positives = 147/184 (79%)
 Frame = -3

Query: 553 KNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
           K L  +GQLKEALL+M+ILG  VKFEGYD++L  CV+QRAIREGQRVH HMIKT YLP  
Sbjct: 66  KTLCSSGQLKEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSV 125

Query: 373 YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
           YL TRLIVLY KCD L DAR + D MP++NVVSWTAMISAYSQRG+  EAL+LF +ML +
Sbjct: 126 YLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRS 185

Query: 193 GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
            T PN FTFAT+LTS   +  F  GRQ+HS+ IK N+E+H+FVGSSLLDMYAK+GRI +A
Sbjct: 186 DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDA 245

Query: 13  LIIF 2
             +F
Sbjct: 246 HGVF 249



 Score =  103 bits (256), Expect = 5e-20
 Identities = 55/157 (35%), Positives = 91/157 (57%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C        G+++H+  IK +Y    ++ + L+ +Y K   + DA  V   +P
Sbjct: 194 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VV+ TA+IS Y+Q G   EAL LF Q+   G   N  T+A+VLT+ +     N G+Q
Sbjct: 254 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VHS +++    +++ + +SL+DMY+K G +  A  IF
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIF 350



 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           Y S+LT      A+  G++VH+H++++       L   LI +Y+KC ++  ARR+ D MP
Sbjct: 295 YASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 354

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
           ER  +SW AM+  YS+ G   E L+LF  M E   + P+  T+  VL+  +   + ++G 
Sbjct: 355 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 414

Query: 115 QVHSLLI--KFNFETHIFVGSSLLDMYAKAGRIQEA 14
           ++   ++  K   E  I     ++D+  +AGR++EA
Sbjct: 415 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 450


>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  246 bits (627), Expect = 4e-63
 Identities = 125/169 (73%), Positives = 140/169 (82%)
 Frame = -3

Query: 508 MSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDS 329
           M I G  V+F+GYDS+LT C++Q AIREGQRVHAHMIKT Y PP YL TRLIVLY KC  
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 328 LNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTS 149
           L DARRVLD MPERNVVSWTAMIS YSQRGY +EAL LF +ML +GT PNEFTFATVLTS
Sbjct: 61  LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120

Query: 148 STSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
            TS+  F LGRQ+HSL+IK +FE+HIFVGSSLLDMYAKAG+I EA  +F
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 169



 Score =  119 bits (297), Expect = 8e-25
 Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 3/184 (1%)
 Frame = -3

Query: 544 SINGQLKEAL---LEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
           S  G   EAL   +EM + G       + ++LT C +    + G+++H+ +IKT +    
Sbjct: 87  SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI 146

Query: 373 YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
           ++ + L+ +Y K   + +ARRV DG+PER+VVS TA+IS Y+Q G   EALDLF ++   
Sbjct: 147 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 206

Query: 193 GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
           G   N  T+A+VLT+ +     + GRQVHS +++     ++ + +SL+DMY+K G +  +
Sbjct: 207 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 266

Query: 13  LIIF 2
             IF
Sbjct: 267 RRIF 270



 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           Y S+LT      A+  G++VH+H+++        L   LI +Y+KC SL  +RR+ D MP
Sbjct: 215 YASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 274

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
           ER V+SW AM+  YS+ G   EA++LF  M E   + P+  TF  VL+  +   + + G 
Sbjct: 275 ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 334

Query: 115 QVHSLLI--KFNFETHIFVGSSLLDMYAKAGRIQEA 14
           ++   ++  K  FE  I     ++D++ +AGR++EA
Sbjct: 335 EIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 370


>ref|XP_006363843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Solanum tuberosum]
          Length = 537

 Score =  245 bits (625), Expect = 7e-63
 Identities = 122/182 (67%), Positives = 142/182 (78%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           LS NG L EAL EM+  G  VKF+ YD+LL  C+NQRAIREGQRVHA+MIKTHY PP YL
Sbjct: 39  LSCNGSLSEALFEMAKQGLQVKFKEYDTLLNECINQRAIREGQRVHANMIKTHYQPPVYL 98

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRLIV Y KC  L DAR V D MP+RNVVSWTA+IS YSQ+G+ +EA+ LF QML +GT
Sbjct: 99  RTRLIVFYIKCGLLGDARWVFDEMPQRNVVSWTALISGYSQKGHISEAIHLFLQMLTSGT 158

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFATVLT  TSA  F  GRQ+H LL+K  FE+H++VGSSLLDMYAKAG++ EA  
Sbjct: 159 APNEFTFATVLTLCTSAIGFQFGRQIHCLLVKSPFESHVYVGSSLLDMYAKAGKVHEARY 218

Query: 7   IF 2
           +F
Sbjct: 219 VF 220



 Score =  106 bits (265), Expect = 4e-21
 Identities = 58/184 (31%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
 Frame = -3

Query: 544 SINGQLKEAL---LEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
           S  G + EA+   L+M   G       + ++LTLC +    + G+++H  ++K+ +    
Sbjct: 138 SQKGHISEAIHLFLQMLTSGTAPNEFTFATVLTLCTSAIGFQFGRQIHCLLVKSPFESHV 197

Query: 373 YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
           Y+ + L+ +Y K   +++AR V + +PER+VVS TA+IS YSQ+G   EAL+ F +    
Sbjct: 198 YVGSSLLDMYAKAGKVHEARYVFENLPERDVVSCTAIISGYSQQGLFEEALEFFCKFQAE 257

Query: 193 GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
               N  T+ +VLT+ +       GRQ+H+ +I+     +  + +SL+DMY+K G+   +
Sbjct: 258 RMSFNYVTYTSVLTALSGLAAVEQGRQLHARIIRLELPFYAVLHNSLIDMYSKCGKFTYS 317

Query: 13  LIIF 2
            +IF
Sbjct: 318 RMIF 321



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           Y S+LT      A+ +G+++HA +I+      A L+  LI +Y+KC     +R + + M 
Sbjct: 266 YTSVLTALSGLAAVEQGRQLHARIIRLELPFYAVLHNSLIDMYSKCGKFTYSRMIFNQMS 325

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
           ER V SW AM+  YS+ G   E ++LF  M E   + P+E T   VL+  +   + + G 
Sbjct: 326 ERTVSSWNAMLVGYSKHGMGKEVVELFKMMREEDKIKPDEITLLAVLSGCSHGGMEDKGV 385

Query: 115 QVHSLLI--KFNFETHIFVGSSLLDMYAKAGRIQEA 14
           ++ + L   K   E  I     ++D+ +++G+++ A
Sbjct: 386 EIFNDLSSGKDRVEVSIEHCGCVVDLLSRSGQVERA 421


>ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Solanum lycopersicum]
          Length = 499

 Score =  244 bits (623), Expect = 1e-62
 Identities = 123/182 (67%), Positives = 141/182 (77%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           LS NG L EAL EM+  G  VKF+ YD++L  C+NQRAIREGQRVHAHMIK+HY PP YL
Sbjct: 15  LSCNGSLSEALYEMAKQGLQVKFKEYDTVLNECINQRAIREGQRVHAHMIKSHYQPPVYL 74

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRLIV Y KC  L DAR V D MP+RNVVSWTA+IS YSQ G  +EA+ LF QML +GT
Sbjct: 75  RTRLIVFYIKCGLLGDARWVFDEMPQRNVVSWTALISGYSQTGDISEAIHLFLQMLTSGT 134

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFATVLTS TSA  F  GRQ+H LL+K  FE+H++VGSSLLDMYAKAG++ EA  
Sbjct: 135 APNEFTFATVLTSCTSAIGFQFGRQIHCLLVKSPFESHVYVGSSLLDMYAKAGKVHEARY 194

Query: 7   IF 2
           IF
Sbjct: 195 IF 196



 Score =  106 bits (264), Expect = 5e-21
 Identities = 57/184 (30%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
 Frame = -3

Query: 544 SINGQLKEAL---LEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
           S  G + EA+   L+M   G       + ++LT C +    + G+++H  ++K+ +    
Sbjct: 114 SQTGDISEAIHLFLQMLTSGTAPNEFTFATVLTSCTSAIGFQFGRQIHCLLVKSPFESHV 173

Query: 373 YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
           Y+ + L+ +Y K   +++AR + + +PER+VVS TA+IS Y+Q+G + EALDLF +    
Sbjct: 174 YVGSSLLDMYAKAGKVHEARYIFENLPERDVVSCTAIISGYAQQGLYEEALDLFRKFQVE 233

Query: 193 GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
               N  T+ +VLT+ +       GRQ+H+ +I+     +  + +SL+DMY+K G+   +
Sbjct: 234 RMSFNYVTYTSVLTALSGLAAVEEGRQLHARIIRLELPFYAVLHNSLIDMYSKCGKFTYS 293

Query: 13  LIIF 2
            +IF
Sbjct: 294 RMIF 297



 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           Y S+LT      A+ EG+++HA +I+      A L+  LI +Y+KC     +R + + M 
Sbjct: 242 YTSVLTALSGLAAVEEGRQLHARIIRLELPFYAVLHNSLIDMYSKCGKFTYSRMIFNQMS 301

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL-PNEFTFATVLTSSTSACVFNLGR 116
           ER V SW AM+  YS+ G   E +DLF  M E   + P+E T   VL+S +   + + G 
Sbjct: 302 ERTVSSWNAMLIGYSKHGMGKEVVDLFEMMREEDKIKPDEITLLAVLSSCSHGGMEDKGV 361

Query: 115 QVHSLLI--KFNFETHIFVGSSLLDMYAKAGRIQEA 14
           ++ + L   K   E  I     ++D+ +++G+++ A
Sbjct: 362 EIFNDLCSGKERVEVSIEHCGCVVDLLSRSGQVERA 397


>ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Citrus sinensis]
          Length = 644

 Score =  244 bits (622), Expect = 2e-62
 Identities = 123/184 (66%), Positives = 145/184 (78%)
 Frame = -3

Query: 553 KNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPA 374
           K L  NGQL +AL+EM+ LG  ++FE YD+LL  CVNQR +R GQRVHAHMIKT Y PP 
Sbjct: 44  KTLCSNGQLTKALIEMATLGLEMRFEEYDALLNACVNQRTLRGGQRVHAHMIKTCYRPPV 103

Query: 373 YLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEA 194
           YL TRLIV Y KC+ L+DAR++ D M ERNVVSWTAMISAYSQ+ +  EAL+LF +ML +
Sbjct: 104 YLRTRLIVFYNKCECLSDARKMFDEMRERNVVSWTAMISAYSQKAHSFEALNLFIRMLRS 163

Query: 193 GTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEA 14
            T PNEFTFATVLTS   A  F LG+Q+HSL+IK NFE+HI+VGSSLLDMYAKAGRI EA
Sbjct: 164 DTEPNEFTFATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEA 223

Query: 13  LIIF 2
             +F
Sbjct: 224 RGVF 227



 Score =  108 bits (271), Expect = 8e-22
 Identities = 52/157 (33%), Positives = 98/157 (62%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C        G+++H+ +IK+++    Y+ + L+ +Y K   +++AR V + +P
Sbjct: 172 FATVLTSCAGAFGFELGKQIHSLIIKSNFESHIYVGSSLLDMYAKAGRIHEARGVFECLP 231

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q G   EA++LF ++   G + N  T+A+VLT+ +       G+Q
Sbjct: 232 ERDVVSCTAIISGYAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQ 291

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VHS +++F   +++ + +SL+DMY+K G +  +  +F
Sbjct: 292 VHSHVLRFEIPSYVVLQNSLIDMYSKCGSLTFSRRVF 328



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E   ++ + G +  +  Y S+LT      A+  G++VH+H+++      
Sbjct: 245 YAQLGLDEEAIELFRKLQVEGMISNYVTYASVLTALSGLAALGHGKQVHSHVLRFEIPSY 304

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLE 197
             L   LI +Y+KC SL  +RRV D M ER V+SW AM+  YS+ G   E ++LF  M E
Sbjct: 305 VVLQNSLIDMYSKCGSLTFSRRVFDNMSERTVISWNAMLVGYSKHGMGREVVELFNLMRE 364

Query: 196 AGTL-PNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
              + P+  T+  VL+  +   + + G +V   ++  K  FE  I     ++DM  +AGR
Sbjct: 365 ENKVKPDSVTYLAVLSGCSHGGMEDRGLEVFHEMVDCKDGFEPEIEHYGCVVDMLGRAGR 424

Query: 25  IQEAL 11
           + EAL
Sbjct: 425 VGEAL 429


>ref|XP_007145648.1| hypothetical protein PHAVU_007G256700g [Phaseolus vulgaris]
           gi|561018838|gb|ESW17642.1| hypothetical protein
           PHAVU_007G256700g [Phaseolus vulgaris]
          Length = 633

 Score =  240 bits (613), Expect = 2e-61
 Identities = 119/177 (67%), Positives = 145/177 (81%)
 Frame = -3

Query: 532 QLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLI 353
           QL+EALL+M++ G+ + F+ Y++LL  CVN+RA REGQRVHAHMIKT+YLP  +L TRLI
Sbjct: 40  QLREALLQMALRGHDMNFQYYNTLLNECVNKRAFREGQRVHAHMIKTNYLPCVFLWTRLI 99

Query: 352 VLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEF 173
           V Y KC+SL +AR + D MPERNVVSWTAMISAYSQRGY ++AL LF QML +GT PNEF
Sbjct: 100 VFYVKCESLTNARNLFDEMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEF 159

Query: 172 TFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           TFATVLTS  S+  F LGRQ+HSL++K N+E H++VGSSLLDMYAK G+I EA  IF
Sbjct: 160 TFATVLTSCISSSGFVLGRQIHSLIVKLNYEAHVYVGSSLLDMYAKDGKIHEARGIF 216



 Score =  109 bits (272), Expect = 6e-22
 Identities = 54/157 (34%), Positives = 96/157 (61%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C++      G+++H+ ++K +Y    Y+ + L+ +Y K   +++AR + + +P
Sbjct: 161 FATVLTSCISSSGFVLGRQIHSLIVKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFECLP 220

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q G   EAL+LF Q  E G   N  T+ +VLT+ +     + G+Q
Sbjct: 221 ERDVVSCTAIISGYAQLGLDQEALELFCQFQEEGMQSNYVTYTSVLTALSGLAALDHGKQ 280

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VH+ L++    + + + +SL+DMY+K G +  A  IF
Sbjct: 281 VHNHLLRSEVPSFVVLQNSLIDMYSKCGNLTYARRIF 317



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E   +    G    +  Y S+LT      A+  G++VH H++++     
Sbjct: 234 YAQLGLDQEALELFCQFQEEGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSF 293

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLE 197
             L   LI +Y+KC +L  ARR+ D M ER V+SW AM+  YS+ G   E L LF  M +
Sbjct: 294 VVLQNSLIDMYSKCGNLTYARRIFDTMHERTVISWNAMLVGYSKHGEGREVLQLFNLMRD 353

Query: 196 AGTL-PNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
              + P+  T   VL+  + A + + G  +   +   K   E        ++D+  +AGR
Sbjct: 354 ENKVKPDSVTVLAVLSGCSHAGLEDKGMDIFYDMTGGKIGVEPDTKHYGCVVDLLGRAGR 413

Query: 25  IQEA 14
           ++EA
Sbjct: 414 VEEA 417


>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like isoform X1 [Glycine max]
           gi|571440626|ref|XP_006575216.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At3g13770,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 634

 Score =  240 bits (612), Expect = 2e-61
 Identities = 120/177 (67%), Positives = 140/177 (79%)
 Frame = -3

Query: 532 QLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLI 353
           +L+EALL M++ G    F+ Y+++L  C+ +RAIREGQRVHAHMIKTHYLP  YL TRLI
Sbjct: 41  RLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLI 100

Query: 352 VLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEF 173
           V Y KCDSL DAR V D MPERNVVSWTAMISAYSQRGY ++AL LF QML +GT PNEF
Sbjct: 101 VFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEF 160

Query: 172 TFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           TFATVLTS   +  F LGRQ+HS +IK N+E H++VGSSLLDMYAK G+I EA  IF
Sbjct: 161 TFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIF 217



 Score =  111 bits (277), Expect = 2e-22
 Identities = 54/157 (34%), Positives = 96/157 (61%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C+       G+++H+H+IK +Y    Y+ + L+ +Y K   +++AR +   +P
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q G   EAL+LF ++   G   N  T+ +VLT+ +     + G+Q
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VH+ L++    +++ + +SL+DMY+K G +  A  IF
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIF 318



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E    +   G    +  Y S+LT      A+  G++VH H++++     
Sbjct: 235 YAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSY 294

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLE 197
             L   LI +Y+KC +L  ARR+ D + ER V+SW AM+  YS+ G   E L+LF  M++
Sbjct: 295 VVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMID 354

Query: 196 AGTL-PNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
              + P+  T   VL+  +   + + G  +   +   K + +        ++DM  +AGR
Sbjct: 355 ENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGR 414

Query: 25  IQEA 14
           ++ A
Sbjct: 415 VEAA 418


>ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g13770, mitochondrial; Flags: Precursor
           gi|9294022|dbj|BAB01925.1| selenium-binding protein-like
           [Arabidopsis thaliana] gi|332641888|gb|AEE75409.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 628

 Score =  238 bits (608), Expect = 7e-61
 Identities = 115/182 (63%), Positives = 146/182 (80%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           L  NG+L+EALLEM++LG  + F GYD+LL  C+++RA+R+GQRVHAHMIKT YLP  YL
Sbjct: 30  LCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRL++ Y KCD L DAR+VLD MPE+NVVSWTAMIS YSQ G+ +EAL +F +M+ +  
Sbjct: 90  RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFATVLTS   A    LG+Q+H L++K+N+++HIFVGSSLLDMYAKAG+I+EA  
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209

Query: 7   IF 2
           IF
Sbjct: 210 IF 211



 Score =  102 bits (253), Expect = 1e-19
 Identities = 53/187 (28%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
 Frame = -3

Query: 544 SINGQLKEALLEMSILGNLVKFEG------YDSLLTLCVNQRAIREGQRVHAHMIKTHYL 383
           S  G   EAL   ++   +++ +G      + ++LT C+    +  G+++H  ++K +Y 
Sbjct: 129 SQTGHSSEAL---TVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185

Query: 382 PPAYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQM 203
              ++ + L+ +Y K   + +AR + + +PER+VVS TA+I+ Y+Q G   EAL++F ++
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245

Query: 202 LEAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRI 23
              G  PN  T+A++LT+ +   + + G+Q H  +++     +  + +SL+DMY+K G +
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305

Query: 22  QEALIIF 2
             A  +F
Sbjct: 306 SYARRLF 312



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E    +   G    +  Y SLLT       +  G++ H H+++      
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQML- 200
           A L   LI +Y+KC +L+ ARR+ D MPER  +SW AM+  YS+ G   E L+LF  M  
Sbjct: 289 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348

Query: 199 EAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVG--SSLLDMYAKAGR 26
           E    P+  T   VL+  +   + + G  +   ++   + T         ++DM  +AGR
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408

Query: 25  IQEA 14
           I EA
Sbjct: 409 IDEA 412


>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score =  236 bits (603), Expect = 3e-60
 Identities = 120/183 (65%), Positives = 142/183 (77%)
 Frame = -3

Query: 550  NLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAY 371
            +L   G+L+EAL EM+  G  +KF+GY++LL  CVN +AIREGQRVHAH+IKT+YLP  Y
Sbjct: 452  SLCSQGRLQEALFEMACQGLEMKFDGYNTLLNECVNNKAIREGQRVHAHIIKTYYLPSVY 511

Query: 370  LNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAG 191
            L TRLIV YTKCD L DAR V D M ERNVVSWTAMIS YS+RG+  E L LF +ML + 
Sbjct: 512  LRTRLIVFYTKCDLLMDARHVFDEMSERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSD 571

Query: 190  TLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEAL 11
              PNEFT ATVLTS T A    LGRQ+HSL+IK N+++HIFVGSSLLDMYAKAGRI EA 
Sbjct: 572  IEPNEFTLATVLTSCTDASGSELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEAR 631

Query: 10   IIF 2
            ++F
Sbjct: 632  MVF 634



 Score =  105 bits (261), Expect = 1e-20
 Identities = 54/155 (34%), Positives = 94/155 (60%)
 Frame = -3

Query: 466  SLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMPER 287
            ++LT C +      G+++H+ +IK +Y    ++ + L+ +Y K   + +AR V + +PER
Sbjct: 581  TVLTSCTDASGSELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFESLPER 640

Query: 286  NVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQVH 107
            +VVS TA+IS Y+Q G   EAL+LF ++   G   N  T+A+VLTS +     + G+QVH
Sbjct: 641  DVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTSLSGLAALDHGKQVH 700

Query: 106  SLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
            S +++     ++ + +S++DMY+K G +  A  IF
Sbjct: 701  SHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIF 735



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = -3

Query: 472  YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
            Y S+LT      A+  G++VH+H+++        L   +I +Y+KC SLN ARR+ D MP
Sbjct: 680  YASVLTSLSGLAALDHGKQVHSHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMP 739

Query: 292  ERNVVSWTAMISAYSQRGYHTEALDLFTQM-LEAGTLPNEFTFATVLTSSTSACVFNLGR 116
            ER V+SW AM+  Y + G   E ++LF  M  E    P+  T   VL+  +     + G 
Sbjct: 740  ERTVISWNAMLVGYGKHGMGREVVELFKLMRTENKVKPDSVTILAVLSGCSHGGFEDKGL 799

Query: 115  QVHSLLIK 92
            ++   ++K
Sbjct: 800  EIFDEMLK 807


>ref|XP_006407172.1| hypothetical protein EUTSA_v10020299mg [Eutrema salsugineum]
           gi|557108318|gb|ESQ48625.1| hypothetical protein
           EUTSA_v10020299mg [Eutrema salsugineum]
          Length = 627

 Score =  236 bits (602), Expect = 3e-60
 Identities = 116/182 (63%), Positives = 145/182 (79%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           L  NG+L+EALL+MS+LG+ + F GYD+LL  C+++RA+R+GQRVHAHMIKT YLP  YL
Sbjct: 29  LCSNGRLQEALLKMSVLGHEMGFHGYDALLNACLDKRALRQGQRVHAHMIKTCYLPATYL 88

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRL++ Y KCD L DAR+VLD MPE+NVVSWTAMIS YSQ G+ +EAL +F +M+ +  
Sbjct: 89  RTRLLIFYGKCDCLKDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALAVFAEMMRSDE 148

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFATVLTS   A   +LG+Q+H LL+K+N+ +HIFVGSSLLDMYAKAG I EA  
Sbjct: 149 KPNEFTFATVLTSCIRASGISLGKQLHGLLVKWNYVSHIFVGSSLLDMYAKAGEIVEARE 208

Query: 7   IF 2
           IF
Sbjct: 209 IF 210



 Score =  104 bits (260), Expect = 2e-20
 Identities = 49/157 (31%), Positives = 95/157 (60%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C+    I  G+++H  ++K +Y+   ++ + L+ +Y K   + +AR + + +P
Sbjct: 155 FATVLTSCIRASGISLGKQLHGLLVKWNYVSHIFVGSSLLDMYAKAGEIVEAREIFECLP 214

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+I+ Y+Q G   EAL++F ++   G  PN  T+A+VLT+ +   + + G+Q
Sbjct: 215 ERDVVSCTAIIAGYAQLGLDEEALEMFQKLQSKGLSPNYVTYASVLTALSGLALLDHGKQ 274

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
            H  +++     +  + +SL+DMY+K G +  A  +F
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 311



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E   ++   G    +  Y S+LT       +  G++ H H+++      
Sbjct: 228 YAQLGLDEEALEMFQKLQSKGLSPNYVTYASVLTALSGLALLDHGKQAHCHVLRRELPFY 287

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQML- 200
           A L   LI +Y+KC +L+ ARR+ D MPER  +SW AM+  YS+ G   E L+LF  M  
Sbjct: 288 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGNEVLELFRLMRD 347

Query: 199 EAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNF----ETHIFVGSSLLDMYAKA 32
           E    P+  T   VL+  +   + + G  +   +I  ++    +T  +    ++DM  +A
Sbjct: 348 EKRVKPDSVTLLAVLSGCSHGRMEDTGLSIFDGMIAGDYGIKPDTEHY--GCIVDMLGRA 405

Query: 31  GRIQEA 14
           GRI+EA
Sbjct: 406 GRIEEA 411


>ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328683|gb|EFH59102.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  236 bits (601), Expect = 5e-60
 Identities = 115/182 (63%), Positives = 144/182 (79%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           L  NG+L+EALLEM +LG  + F  YD+LL  C+++RA+REGQRVHAHMIKT YLP  YL
Sbjct: 29  LCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYL 88

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRL++ Y KCD L DAR+VLD MPE+NVVSWTAMIS YSQ G+ +EAL +F +M+ +  
Sbjct: 89  RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDG 148

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFATVLTS   A    LG+Q+H L++K+N+++HIFVGSSLLDMYAKAG+I+EA  
Sbjct: 149 KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEARE 208

Query: 7   IF 2
           IF
Sbjct: 209 IF 210



 Score =  104 bits (259), Expect = 2e-20
 Identities = 54/187 (28%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
 Frame = -3

Query: 544 SINGQLKEALLEMSILGNLVKFEG------YDSLLTLCVNQRAIREGQRVHAHMIKTHYL 383
           S  G   EAL   S+   +++ +G      + ++LT C+    +  G+++H  ++K +Y 
Sbjct: 128 SQTGHSSEAL---SVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYD 184

Query: 382 PPAYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQM 203
              ++ + L+ +Y K   + +AR + + +PER+VVS TA+I+ Y+Q G   EAL++F ++
Sbjct: 185 SHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRL 244

Query: 202 LEAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRI 23
              G  PN  T+A++LT+ +   + + G+Q H  +++     +  + +SL+DMY+K G +
Sbjct: 245 QSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 304

Query: 22  QEALIIF 2
             A  +F
Sbjct: 305 SYAQRLF 311



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E    +   G    +  Y SLLT       +  G++ H H+++      
Sbjct: 228 YAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 287

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQML- 200
           A L   LI +Y+KC +L+ A+R+ D MPER  +SW AM+  YS+ G   E L+LF  M  
Sbjct: 288 AVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 347

Query: 199 EAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
           E    P+  T   VL+  +   + + G  ++  ++  ++  +        ++DM  +AGR
Sbjct: 348 EKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGR 407

Query: 25  IQEA 14
           I EA
Sbjct: 408 IDEA 411


>ref|XP_007028899.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508717504|gb|EOY09401.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 718

 Score =  234 bits (598), Expect = 1e-59
 Identities = 117/169 (69%), Positives = 132/169 (78%)
 Frame = -3

Query: 508 MSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDS 329
           M++ G  ++FE YD LL  C+N+R  REGQRVHAHMIKT YLPP YL TRLI+ Y KCD 
Sbjct: 1   MAVQGLEMRFESYDMLLNACINKRRFREGQRVHAHMIKTRYLPPVYLRTRLIIFYGKCDC 60

Query: 328 LNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTS 149
           L +AR VLD MPERNVVSWTAMISAYSQRG  +EAL+LF QML + T PNEFTFATVLTS
Sbjct: 61  LREARHVLDEMPERNVVSWTAMISAYSQRGLASEALNLFVQMLRSDTEPNEFTFATVLTS 120

Query: 148 STSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
            T    F LGRQ+HS +IK   +THI+VGSSLLDMYAKAGRI EA  IF
Sbjct: 121 CTGTFGFELGRQIHSFVIKRTLDTHIYVGSSLLDMYAKAGRIHEAREIF 169



 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/157 (32%), Positives = 94/157 (59%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C        G+++H+ +IK       Y+ + L+ +Y K   +++AR + + +P
Sbjct: 114 FATVLTSCTGTFGFELGRQIHSFVIKRTLDTHIYVGSSLLDMYAKAGRIHEAREIFNCLP 173

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q G   +AL+LF ++   G   N  T+A+VLT+ +     +LG+Q
Sbjct: 174 ERDVVSCTAIISGYAQLGLDADALELFRRLNLEGMSANYVTYASVLTALSGLAALDLGKQ 233

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VH+ +++     ++ + +SL+DMY+K G +  +  IF
Sbjct: 234 VHNHVLRCQLPFYVVLQNSLIDMYSKCGNLIYSRRIF 270



 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++    E    +++ G    +  Y S+LT      A+  G++VH H+++      
Sbjct: 187 YAQLGLDADALELFRRLNLEGMSANYVTYASVLTALSGLAALDLGKQVHNHVLRCQLPFY 246

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQML- 200
             L   LI +Y+KC +L  +RR+ D MPER V+SW AM+  YS+ G   E ++L+  M  
Sbjct: 247 VVLQNSLIDMYSKCGNLIYSRRIFDNMPERTVISWNAMLVGYSKHGMGREVVELYRLMRN 306

Query: 199 EAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
           E    P+  T   VL+  +   + ++G Q+   ++  K   E  I     ++D+  +AGR
Sbjct: 307 ENKVKPDSVTLLGVLSGCSHGGMEDVGLQIFDEMVNGKDGVEPDIEHYGCVVDLLGRAGR 366

Query: 25  IQEA 14
           ++EA
Sbjct: 367 VEEA 370


>ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Capsella rubella]
           gi|482568628|gb|EOA32817.1| hypothetical protein
           CARUB_v10016128mg [Capsella rubella]
          Length = 634

 Score =  233 bits (595), Expect = 2e-59
 Identities = 115/182 (63%), Positives = 142/182 (78%)
 Frame = -3

Query: 547 LSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYL 368
           L  NG+L EALLEM +LG    F GYD+LL  C+++RA+R+GQRVHAHMIKT YLP  YL
Sbjct: 36  LCTNGRLHEALLEMVMLGPETGFHGYDALLNACLDKRALRQGQRVHAHMIKTCYLPATYL 95

Query: 367 NTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGT 188
            TRL++ Y KCD L DAR+VLD MPE+NVVSWTAMIS YSQ G+ +EAL +F +M+ +  
Sbjct: 96  RTRLLIFYGKCDRLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDG 155

Query: 187 LPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALI 8
            PNEFTFAT LTS T A    LG+Q+H LL+K+++++HIFVGSSLLDMYAKAG+I EA  
Sbjct: 156 KPNEFTFATALTSCTRASGLALGKQIHGLLVKWSYDSHIFVGSSLLDMYAKAGQIVEARE 215

Query: 7   IF 2
           IF
Sbjct: 216 IF 217



 Score =  103 bits (258), Expect = 3e-20
 Identities = 56/187 (29%), Positives = 103/187 (55%), Gaps = 6/187 (3%)
 Frame = -3

Query: 544 SINGQLKEALLEMSILGNLVKFEG------YDSLLTLCVNQRAIREGQRVHAHMIKTHYL 383
           S  G   EAL   S+   +++ +G      + + LT C     +  G+++H  ++K  Y 
Sbjct: 135 SQTGHSSEAL---SVFAEMMRSDGKPNEFTFATALTSCTRASGLALGKQIHGLLVKWSYD 191

Query: 382 PPAYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQM 203
              ++ + L+ +Y K   + +AR + D +PER+VVS TA+I+ Y+Q G   EAL+ F ++
Sbjct: 192 SHIFVGSSLLDMYAKAGQIVEAREIFDCLPERDVVSCTAIIAGYAQLGLDEEALETFQRL 251

Query: 202 LEAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRI 23
           L  G  PN  T+A++LT+ +   + + G+Q H  +++     +  + +SL+DMY+K G +
Sbjct: 252 LSEGMTPNYVTYASLLTALSGLALIDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 311

Query: 22  QEALIIF 2
             A  +F
Sbjct: 312 SYARRLF 318



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E    +   G    +  Y SLLT       I  G++ H H+++      
Sbjct: 235 YAQLGLDEEALETFQRLLSEGMTPNYVTYASLLTALSGLALIDHGKQAHCHVLRRELPFY 294

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQML- 200
           A L   LI +Y+KC +L+ ARR+ D M ER  VSW AM+  YS+ G   E L+LF  M  
Sbjct: 295 AVLQNSLIDMYSKCGNLSYARRLFDNMLERTSVSWNAMLVGYSKHGLGGEVLELFRLMRD 354

Query: 199 EAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNF----ETHIFVGSSLLDMYAKA 32
           E    P+  T   VL+  +   + + G  +   +I  ++    +T  +    ++DM  ++
Sbjct: 355 EKRVKPDAVTLLAVLSGCSHGRMEDTGLSIFEGMIAGDYGIKPDTEHY--GCIVDMLGRS 412

Query: 31  GRIQEA 14
           GRI EA
Sbjct: 413 GRIDEA 418


>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867324|gb|EEF04455.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 586

 Score =  232 bits (592), Expect = 5e-59
 Identities = 117/169 (69%), Positives = 134/169 (79%)
 Frame = -3

Query: 508 MSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDS 329
           M+I G  +KF+GY+ LL  CVN+RA+REGQRVHAHMIKT YLPP YL+TRLI+LYTKC+ 
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 328 LNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTS 149
           L  AR V D M ERNVVSWTAMIS YSQRG+ +EAL LF QML + T PNEFTFATVL+S
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120

Query: 148 STSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
            T    F LGRQ+HS + K N+E HIFVGSSLLDMYAKAGRI EA  +F
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVF 169



 Score =  106 bits (265), Expect = 4e-21
 Identities = 52/157 (33%), Positives = 95/157 (60%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++L+ C        G+++H+H+ K +Y    ++ + L+ +Y K   +++AR V + +P
Sbjct: 114 FATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q G   EAL+LF ++   G   N  T+A++LT+ +     + G+Q
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQ 233

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VHS +++     ++ + +SL+DMY+K G +  A  IF
Sbjct: 234 VHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIF 270



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E    +   G    +  Y SLLT      A+  G++VH+H+++      
Sbjct: 187 YAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFY 246

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLE 197
             L   LI +Y+KC +LN AR++ + MP R V+SW AM+  YS+ G   E + LF  M E
Sbjct: 247 VVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMRE 306

Query: 196 AGTL-PNEFTFATVLTSSTSACVFNLGRQVHSLLIK--FNFETHIFVGSSLLDMYAKAGR 26
              + P+  TF  VL+  +   + + G ++   ++      E  I     ++D+  +AGR
Sbjct: 307 ENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGR 366

Query: 25  IQEA 14
           ++EA
Sbjct: 367 VEEA 370


>ref|XP_007203274.1| hypothetical protein PRUPE_ppa025467mg [Prunus persica]
           gi|462398805|gb|EMJ04473.1| hypothetical protein
           PRUPE_ppa025467mg [Prunus persica]
          Length = 575

 Score =  231 bits (588), Expect = 1e-58
 Identities = 120/170 (70%), Positives = 138/170 (81%), Gaps = 1/170 (0%)
 Frame = -3

Query: 508 MSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDS 329
           M++ G  +KFEGY +LL  CVN+RA REGQRVHAHM KT YLPP +L TRLIV Y  C+ 
Sbjct: 1   MAVQGLEMKFEGYYTLLNECVNRRAFREGQRVHAHMTKTCYLPPMHLRTRLIVFYNNCEC 60

Query: 328 LNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTS 149
           LNDA+RVLD MP RNVVSWTAMISAYS+RG  +EAL+LF QML +GT PNEFTFATVLTS
Sbjct: 61  LNDAQRVLDEMPVRNVVSWTAMISAYSKRGCASEALNLFLQMLRSGTEPNEFTFATVLTS 120

Query: 148 -STSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
            +  A  F+LGRQ+HSL+IK  FE+HIFVGSSLLDMYAKAGRI EA  +F
Sbjct: 121 CAGGAWGFDLGRQIHSLIIKTKFESHIFVGSSLLDMYAKAGRIYEARGVF 170



 Score =  105 bits (262), Expect = 9e-21
 Identities = 52/141 (36%), Positives = 90/141 (63%)
 Frame = -3

Query: 424 GQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQ 245
           G+++H+ +IKT +    ++ + L+ +Y K   + +AR V + +PER+VVS TA+IS Y+Q
Sbjct: 131 GRQIHSLIIKTKFESHIFVGSSLLDMYAKAGRIYEARGVFECLPERDVVSCTAIISGYAQ 190

Query: 244 RGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFV 65
            G   EAL+LF Q+   G   N  T+A+VLT+ +     +LGRQVH+ +++    +++ +
Sbjct: 191 LGLDEEALELFRQLQREGMTSNYVTYASVLTALSGLAALDLGRQVHNHVLRRELPSYVVL 250

Query: 64  GSSLLDMYAKAGRIQEALIIF 2
            +SL+DMY+K G +  +  IF
Sbjct: 251 QNSLIDMYSKCGNLSYSRRIF 271



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E   ++   G    +  Y S+LT      A+  G++VH H+++      
Sbjct: 188 YAQLGLDEEALELFRQLQREGMTSNYVTYASVLTALSGLAALDLGRQVHNHVLRRELPSY 247

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLE 197
             L   LI +Y+KC +L+ +RR+ D MPER V+SW AM+  YS+ G   E + LF  M E
Sbjct: 248 VVLQNSLIDMYSKCGNLSYSRRIFDSMPERTVISWNAMLVGYSKHGMGKEVVKLFKLMKE 307

Query: 196 AGTL-PNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
              + P+  TF  VL+  +   + + G +    +   +   E  +     ++D+  +AGR
Sbjct: 308 ENKVRPDSVTFLAVLSGCSHGGMEDRGLEYFYEMAEGENGTEPELEHYGCVVDLLGRAGR 367

Query: 25  IQEA 14
           ++EA
Sbjct: 368 VEEA 371


>ref|XP_006850136.1| hypothetical protein AMTR_s00022p00232590 [Amborella trichopoda]
           gi|548853734|gb|ERN11717.1| hypothetical protein
           AMTR_s00022p00232590 [Amborella trichopoda]
          Length = 321

 Score =  227 bits (579), Expect = 2e-57
 Identities = 114/181 (62%), Positives = 138/181 (76%)
 Frame = -3

Query: 544 SINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLN 365
           ++NG L EALLEMSI G  VKF  YDS+LT CVN +A+  G+RVH HMIKT Y P  YL 
Sbjct: 42  TVNGNLDEALLEMSIGGFTVKFHFYDSVLTECVNNKALNHGKRVHTHMIKTCYRPSVYLG 101

Query: 364 TRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTL 185
           TRL++ YTKCD L DAR + + MPERNVVSWTAMISAYS+RG+ +EAL LF +ML A   
Sbjct: 102 TRLLIFYTKCDCLGDARLLFERMPERNVVSWTAMISAYSRRGHSSEALSLFVKMLGADFQ 161

Query: 184 PNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALII 5
           PNEFTFATVLT       F+ G+Q+HSLL+K +F++HIFV SSLLDMYAKAG+I +A  +
Sbjct: 162 PNEFTFATVLTCCNGNFGFDHGKQIHSLLVKTHFKSHIFVSSSLLDMYAKAGKIHDARQV 221

Query: 4   F 2
           F
Sbjct: 222 F 222



 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 45/122 (36%), Positives = 74/122 (60%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C        G+++H+ ++KTH+    ++++ L+ +Y K   ++DAR+V DGM 
Sbjct: 167 FATVLTCCNGNFGFDHGKQIHSLLVKTHFKSHIFVSSSLLDMYAKAGKIHDARQVFDGMK 226

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           +R++VS TA+I+ Y+Q G   EAL LF Q+ + G  PN  TF TVL + +       G Q
Sbjct: 227 DRDIVSCTAIIAGYAQLGLDEEALKLFRQLQKEGMRPNYVTFTTVLMALSGLAALEYGEQ 286

Query: 112 VH 107
           VH
Sbjct: 287 VH 288


>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 840

 Score =  227 bits (579), Expect = 2e-57
 Identities = 119/197 (60%), Positives = 142/197 (72%), Gaps = 21/197 (10%)
 Frame = -3

Query: 529 LKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIV 350
           L++ LL+M++ G  +KFE Y+++L  CVN+RA REGQRVHAHMIKT YLP  +L TRLIV
Sbjct: 227 LQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIV 286

Query: 349 LYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAG------- 191
           LYTKCDSL DA  V D MPERNVVSWTAMISAYSQRGY ++AL+LF   ++         
Sbjct: 287 LYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAI 346

Query: 190 --------------TLPNEFTFATVLTSSTSACVFNLGRQVHSLLIKFNFETHIFVGSSL 53
                         T PNEFTFATVLTS TS+  F LGRQ+HSL+IK N+E H+FVGSSL
Sbjct: 347 DKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSL 406

Query: 52  LDMYAKAGRIQEALIIF 2
           LDMYAK G+I EA  +F
Sbjct: 407 LDMYAKDGKIHEARTVF 423



 Score =  103 bits (257), Expect = 3e-20
 Identities = 52/157 (33%), Positives = 95/157 (60%)
 Frame = -3

Query: 472 YDSLLTLCVNQRAIREGQRVHAHMIKTHYLPPAYLNTRLIVLYTKCDSLNDARRVLDGMP 293
           + ++LT C +      G+++H+ +IK +Y    ++ + L+ +Y K   +++AR V + +P
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427

Query: 292 ERNVVSWTAMISAYSQRGYHTEALDLFTQMLEAGTLPNEFTFATVLTSSTSACVFNLGRQ 113
           ER+VVS TA+IS Y+Q G   EAL+LF ++   G   N  T+  VLT+ +     +LG+Q
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQ 487

Query: 112 VHSLLIKFNFETHIFVGSSLLDMYAKAGRIQEALIIF 2
           VH+ +++    + + + +SL+DMY+K G +  +  IF
Sbjct: 488 VHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIF 524



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
 Frame = -3

Query: 556 WKNLSINGQLKEALLEMSILGNLVKFEGYDSLLTLCVNQRAIREGQRVHAHMIKTHYLPP 377
           +  L ++ +  E    +   G    +  Y  +LT      A+  G++VH H++++     
Sbjct: 441 YAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSF 500

Query: 376 AYLNTRLIVLYTKCDSLNDARRVLDGMPERNVVSWTAMISAYSQRGYHTEALDLFTQMLE 197
             L   LI +Y+KC +L  +RR+ D M ER V+SW AM+  YS+ G   E L LFT M E
Sbjct: 501 VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMRE 560

Query: 196 AGTL-PNEFTFATVLTSSTSACVFNLGRQVHSLLI--KFNFETHIFVGSSLLDMYAKAGR 26
              + P+  T   VL+  +   + + G  + + +   K   E  +     ++D+  ++GR
Sbjct: 561 ETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGR 620

Query: 25  IQEA 14
           ++EA
Sbjct: 621 VEEA 624