BLASTX nr result
ID: Akebia24_contig00021193
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00021193 (648 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 88 3e-15 ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro... 67 6e-09 ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 67 6e-09 gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 63 7e-08 dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 60 8e-07 dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 58 3e-06 >dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] Length = 894 Score = 87.8 bits (216), Expect = 3e-15 Identities = 61/170 (35%), Positives = 81/170 (47%), Gaps = 12/170 (7%) Frame = +2 Query: 173 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 352 MAV + + EP+VFKRSN TSK QLN + KK S QR+DG SG+ V+D Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKSS-QRYDGQSGRQVSDVP 59 Query: 353 SPKNQKSSLEKGK------------XXXXXXXXXXXXXXXXXXXXXXXXDKSKHSSEKKL 496 S Q SS KGK D+SKHSS++ Sbjct: 60 STNGQSSSASKGKTTKLSSMKSPIASPKASTSFAKASPVANPKVSSSSDDRSKHSSKQNT 119 Query: 497 AINDREKKPLNKSPIEPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGL 646 +E+K L EP DS+D+KPLSAR+F T L + +S + ++GL Sbjct: 120 INVVKEEKELVNPAAEPYGDSEDEKPLSARLF---TGLTKGSSNNANKGL 166 >ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] gi|590606159|ref|XP_007020668.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao] Length = 836 Score = 66.6 bits (161), Expect = 6e-09 Identities = 57/163 (34%), Positives = 73/163 (44%), Gaps = 31/163 (19%) Frame = +2 Query: 233 PIVFKRSNITS-KQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXX 409 P+VFKR+N +S KQ QLN E+KK S QR DG SG+ V+D SP Q S+ K K Sbjct: 21 PVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNK------ 74 Query: 410 XXXXXXXXXXXXXXXXXXDKSKHSSEKKL-------------AINDREKKPL-------- 526 K+ SS K L ++ND+ K+ L Sbjct: 75 --SISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQSKQALKQNMTTAV 132 Query: 527 --NKSPI----EPNADSDDDK---PLSARIFAASTSLPRNNST 628 +SPI EPN+D DDD PLSAR+ S + ST Sbjct: 133 KEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGNKGAST 175 >ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|590606147|ref|XP_007020665.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao] Length = 904 Score = 66.6 bits (161), Expect = 6e-09 Identities = 57/163 (34%), Positives = 73/163 (44%), Gaps = 31/163 (19%) Frame = +2 Query: 233 PIVFKRSNITS-KQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXX 409 P+VFKR+N +S KQ QLN E+KK S QR DG SG+ V+D SP Q S+ K K Sbjct: 21 PVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNK------ 74 Query: 410 XXXXXXXXXXXXXXXXXXDKSKHSSEKKL-------------AINDREKKPL-------- 526 K+ SS K L ++ND+ K+ L Sbjct: 75 --SISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQSKQALKQNMTTAV 132 Query: 527 --NKSPI----EPNADSDDDK---PLSARIFAASTSLPRNNST 628 +SPI EPN+D DDD PLSAR+ S + ST Sbjct: 133 KEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGNKGAST 175 >gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1| topoisomerase I [Nicotiana tabacum] Length = 852 Score = 63.2 bits (152), Expect = 7e-08 Identities = 50/155 (32%), Positives = 69/155 (44%), Gaps = 17/155 (10%) Frame = +2 Query: 233 PIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXXX 412 P+VFKRS+ TSKQ Q N S Q+ DG SG+ +D SP Q SS EK K Sbjct: 23 PLVFKRSSTTSKQNQSN-----SSSQKQDGRSGRQASDVRSPNGQSSSAEKVKAGTSSKA 77 Query: 413 XXXXXXXXXXXXXXXXXDKSKHSSEKKLAINDREKKPLN----------KSPIEPNA--- 553 S + + A + K +N K +EP + Sbjct: 78 SRAVSPFTSPKASPSSGRTSPAPNSRPSASAGNQAKDVNQQSKIVPNEPKQAVEPKSEPN 137 Query: 554 ----DSDDDKPLSARIFAASTSLPRNNSTHVSEGL 646 DS+DDKPLSAR+ S+ L ++NS+H ++ L Sbjct: 138 DEAEDSEDDKPLSARL---SSGLSKSNSSHANKVL 169 >dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra] Length = 920 Score = 59.7 bits (143), Expect = 8e-07 Identities = 51/172 (29%), Positives = 68/172 (39%), Gaps = 21/172 (12%) Frame = +2 Query: 173 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 352 MAV+ TT P++FKRSN SKQ Q N E KK S QRH G S H +D Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60 Query: 353 SPKNQKSSLEKG------KXXXXXXXXXXXXXXXXXXXXXXXXDKSKHSSEKKLAINDRE 514 + SS +KG K +S A + + Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120 Query: 515 KKPLNKSP---IEP------------NADSDDDKPLSARIFAASTSLPRNNS 625 ++ +KS IEP + SDD+KPLSAR F S+ N++ Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHA 172 >dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] Length = 926 Score = 57.8 bits (138), Expect = 3e-06 Identities = 31/73 (42%), Positives = 39/73 (53%) Frame = +2 Query: 173 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 352 MAV+ TT P++FKRSN TSKQ Q N E KK S Q+H G S H +D Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60 Query: 353 SPKNQKSSLEKGK 391 + SS +KG+ Sbjct: 61 PANGESSSAQKGR 73