BLASTX nr result
ID: Akebia24_contig00021099
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00021099 (1742 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 302 e-146 ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor... 273 e-140 ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 285 e-139 ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 268 e-138 ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 288 e-138 ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 282 e-137 ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 273 e-135 ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl... 284 e-135 ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas... 288 e-134 ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 270 e-134 emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 302 e-133 ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr... 272 e-132 ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas... 288 e-132 ref|XP_007017901.1| Pseudouridine synthase family protein isofor... 270 e-132 ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A... 268 e-131 ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor... 273 e-131 gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus... 270 e-130 gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus... 270 e-130 ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S... 265 e-130 ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl... 262 e-129 >ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis vinifera] gi|302141717|emb|CBI18920.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 302 bits (774), Expect(2) = e-146 Identities = 145/185 (78%), Positives = 163/185 (88%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLSEQFK +IHRVYISLT+GVP+P++GR+E+P+GRD NNRIRM AVPGPSN Q Sbjct: 243 HSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQA 302 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GGSALVEWRLETGRTHQIRAHAK+LGIPLLGDEVYGGTK+MALSL Sbjct: 303 RHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSL 362 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ R P+S G L+QLVS+LDRPCLHA+ALGF HP TG+N FSC PP DFAEILS LR Sbjct: 363 LRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRK 422 Query: 1211 INTEK 1225 I+TEK Sbjct: 423 ISTEK 427 Score = 246 bits (629), Expect(2) = e-146 Identities = 137/209 (65%), Positives = 157/209 (75%), Gaps = 6/209 (2%) Frame = +1 Query: 22 SDQSQEPL---SIQRGNYAGVRLQETV---QKGSEKXXXXXXXXXXXXCVSRARVQSSIR 183 S+ + EPL S +R NYAGVRL+ETV S K +SRARVQSSIR Sbjct: 41 SNSTDEPLVSVSGRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIR 100 Query: 184 SGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAH 363 SG VSVN R+++KVSHVI+ GDKVNCTISELQPLRAEPEDIPL+IVYED HVLVVNKPAH Sbjct: 101 SGLVSVNDRIVDKVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAH 160 Query: 364 MVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLS 543 MVVHPAPGNA+GTLVN ILHHCSLPTVAL N + SE +D SD+E ++F+ G + Sbjct: 161 MVVHPAPGNASGTLVNGILHHCSLPTVALPNRD--SEEDDISDDEFNSFA------AGQN 212 Query: 544 SRICGDSIRPGIVHRLDKGTSGLLVIAKD 630 C +IRPGIVHRLDKGTSGLLV+AKD Sbjct: 213 CGTCETNIRPGIVHRLDKGTSGLLVVAKD 241 >ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum lycopersicum] Length = 436 Score = 273 bits (697), Expect(2) = e-140 Identities = 134/185 (72%), Positives = 152/185 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HS A L+EQFK+ TI RVY+S+T GVP+ +AGR+++PIGRD NNRIRM A+PG + Sbjct: 245 HSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKS 304 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHA SRYKVIE L GGGSALVEWRLETGRTHQIRAHAKHLGIPL+GDEVYGGTK+MALSL Sbjct: 305 RHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSL 364 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 LQ +TP G LSQLVS++DRPCLHAL LGF+HP TGEN F+ PP DFAEILS LR Sbjct: 365 LQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRA 424 Query: 1211 INTEK 1225 I TEK Sbjct: 425 IKTEK 429 Score = 255 bits (652), Expect(2) = e-140 Identities = 132/206 (64%), Positives = 160/206 (77%) Frame = +1 Query: 13 DSVSDQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGH 192 DS SD S + + +R NY+GV+L+ETV + K VSRARVQSSIRSG Sbjct: 38 DSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGL 97 Query: 193 VSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVV 372 VSVNGRV +KVSH++K GDKV+CTI++L+PLRAEPEDIPL+IVYED HVLVVNKPAHMVV Sbjct: 98 VSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVV 157 Query: 373 HPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRI 552 HPAPGNA GTLV+ ILHHCSLPTV+ E+LS+ ED SD+E++ FS ++S SS + Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVM 217 Query: 553 CGDSIRPGIVHRLDKGTSGLLVIAKD 630 C S+RPGIVHRLDKGTSGLLV+AK+ Sbjct: 218 CESSVRPGIVHRLDKGTSGLLVVAKN 243 >ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus sinensis] Length = 421 Score = 285 bits (730), Expect(2) = e-139 Identities = 143/187 (76%), Positives = 154/187 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLSEQFK TI RVYISLT+GVPS +GRIEVPI RD NNRIRM A+PG + Q Sbjct: 233 HSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSNKHGQA 292 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GGGSALVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGTK+MA SL Sbjct: 293 RHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSL 352 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 LQ RT G + +LVS L RPCLHA+ALGF HPHT E QFSCPPPADFAEILS LR Sbjct: 353 LQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLRE 412 Query: 1211 INTEKPS 1231 I TEK S Sbjct: 413 IGTEKLS 419 Score = 238 bits (606), Expect(2) = e-139 Identities = 130/208 (62%), Positives = 150/208 (72%) Frame = +1 Query: 7 TEDSVSDQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRS 186 + S ++EP++ NYAGV+L+ETV + K +SRARVQSSIRS Sbjct: 40 SSSSSGGNNREPIA----NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRS 95 Query: 187 GHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHM 366 G VS+NG+V++KVSH +K GD VNCTISELQPLRAE EDIPL+IVYED +VLVVNKPAHM Sbjct: 96 GLVSINGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHM 155 Query: 367 VVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSS 546 VVHPAPGNA GTLVN ILHHCSLPT+A SN E S+ ED SD+ E SS Sbjct: 156 VVHPAPGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDD------------EEFSS 203 Query: 547 RICGDSIRPGIVHRLDKGTSGLLVIAKD 630 I G SIRPGIVHRLDKGTSGLLV+AKD Sbjct: 204 SISGASIRPGIVHRLDKGTSGLLVVAKD 231 >ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum tuberosum] Length = 431 Score = 268 bits (684), Expect(2) = e-138 Identities = 132/185 (71%), Positives = 152/185 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 +S A L+EQFK+ TI RVY+S+T GVP+ +AGR+++PIGRD NNRIRM A+PG + Sbjct: 245 NSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKS 304 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHA SRYKVIE L GGSALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK+MALSL Sbjct: 305 RHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSL 364 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 LQ +TP G LSQLVS++DRPCLHAL LGF+HP TGEN F+ PP DFAEILS LR Sbjct: 365 LQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSYLRA 424 Query: 1211 INTEK 1225 INTEK Sbjct: 425 INTEK 429 Score = 253 bits (646), Expect(2) = e-138 Identities = 130/206 (63%), Positives = 160/206 (77%) Frame = +1 Query: 13 DSVSDQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGH 192 DS SD S + + +R NY+GV+L+ETV + K VSRARVQSSIRSG Sbjct: 38 DSDSDDSPDEIPGRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGL 97 Query: 193 VSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVV 372 VSVNGRV +KVSH++K GDKV+CTI++L+PLRAEPEDIPL+IV+ED HVLVVNKPAHMVV Sbjct: 98 VSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVV 157 Query: 373 HPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRI 552 HPAPGNA GTLV+ ILHHCSLPT++ E+LS+ ED SD+E++ FS ++S SS + Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVM 217 Query: 553 CGDSIRPGIVHRLDKGTSGLLVIAKD 630 C S+RPGIVHRLDKGTSGLLV+AK+ Sbjct: 218 CESSVRPGIVHRLDKGTSGLLVVAKN 243 >ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508723228|gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 433 Score = 288 bits (736), Expect(2) = e-138 Identities = 140/189 (74%), Positives = 161/189 (85%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH+HLSEQFKQ TI RVYISLT GVPSP AGR+++ IGRD NNR+RM+AVPG ++ + Sbjct: 244 HSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMIAVPGLNHHGRA 303 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIEVL GGGSAL++WRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMALSL Sbjct: 304 RHAASRYKVIEVLAGGGSALIQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMALSL 363 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RTP + LS+LVS+L+RP LHAL LGF+HPH+ E FSC PP DFAEILS LR Sbjct: 364 LRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHSREMMHFSCQPPPDFAEILSDLRK 423 Query: 1211 INTEKPSFK 1237 I TEKP+FK Sbjct: 424 IGTEKPTFK 432 Score = 232 bits (592), Expect(2) = e-138 Identities = 128/202 (63%), Positives = 150/202 (74%), Gaps = 1/202 (0%) Frame = +1 Query: 28 QSQEPLSIQRGNYAGVRLQETVQKGSE-KXXXXXXXXXXXXCVSRARVQSSIRSGHVSVN 204 ++QEP+ R +Y GV+L+ETV + K +SRARVQSSI+SG V+VN Sbjct: 54 KTQEPI---RTSYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVN 110 Query: 205 GRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAP 384 GRV++KVSH ++ GDKVNC ISELQPLRAEPEDIPL+IVYED HVLVVNKP HMVVHPAP Sbjct: 111 GRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAP 170 Query: 385 GNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDS 564 GNA GTLVN ILHHCSLPTVALS E+LS+ ED SD+ D+ G S+ S Sbjct: 171 GNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDD-------DEGFCYGASA---AAS 220 Query: 565 IRPGIVHRLDKGTSGLLVIAKD 630 +RPGIVHRLDKGTSGLLV+AKD Sbjct: 221 VRPGIVHRLDKGTSGLLVVAKD 242 >ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1| pseudouridine synthase family protein [Populus trichocarpa] Length = 444 Score = 282 bits (722), Expect(2) = e-137 Identities = 141/189 (74%), Positives = 157/189 (83%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLSEQFK TI RVY+SLT GVP+PMAGRI+VPIGRD++NRIRM A+ P N Q Sbjct: 256 HSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIVEP-NRGQA 314 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GGGSALVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGT++MALSL Sbjct: 315 RHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTQNMALSL 374 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RT SC LS +S L+RPCLHALALGF HP TG+ FSCPPP DF EILS LR Sbjct: 375 LRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLRE 434 Query: 1211 INTEKPSFK 1237 + TEK SFK Sbjct: 435 MGTEKLSFK 443 Score = 234 bits (596), Expect(2) = e-137 Identities = 131/207 (63%), Positives = 151/207 (72%), Gaps = 4/207 (1%) Frame = +1 Query: 22 SDQSQEPLSIQ----RGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSG 189 S ++EP S Q R NY+GV+L+E+V S K +SRARVQSSI+SG Sbjct: 60 SSSTREPNSNQNPGQRINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSG 119 Query: 190 HVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMV 369 VSVNG+VI+KVSH +K GDKVNC ISELQPLRAEPE+IPL+IVYED +VLVVNKPAHMV Sbjct: 120 LVSVNGKVIDKVSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMV 179 Query: 370 VHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSR 549 VHPAPGNA GTLVN ILHHCSLPTV S+ E+LS ED SD++ EGL S Sbjct: 180 VHPAPGNATGTLVNGILHHCSLPTV--SSQEVLSGAEDVSDDD----------DEGLCSS 227 Query: 550 ICGDSIRPGIVHRLDKGTSGLLVIAKD 630 S+RPGIVHRLDKGTSGLLV+AKD Sbjct: 228 SYAASVRPGIVHRLDKGTSGLLVVAKD 254 >ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis sativus] Length = 453 Score = 273 bits (699), Expect(2) = e-135 Identities = 132/185 (71%), Positives = 150/185 (81%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLS QFKQ +I RVYISLT GVP AGRIE+PI RD NNRIRM A+ G N Sbjct: 242 HSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHA 301 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 ++AASRY V+E+L GGS+LVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMA+SL Sbjct: 302 KYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSL 361 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ R ++C G L QLVS L+RPCLHAL LGF HPHTG+N +FSCPPP DF EILS LR Sbjct: 362 LRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRE 421 Query: 1211 INTEK 1225 I T+K Sbjct: 422 IGTQK 426 Score = 237 bits (605), Expect(2) = e-135 Identities = 129/202 (63%), Positives = 149/202 (73%) Frame = +1 Query: 25 DQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHVSVN 204 D+ E S + NYAG RL+ETV K +SRARVQSSIR+G VSVN Sbjct: 48 DEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVN 107 Query: 205 GRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAP 384 GRVI+KVSH +K GD +NCTISELQPLRAEPEDI L+IVYED HVLVVNKPAHMVVHPAP Sbjct: 108 GRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAP 167 Query: 385 GNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDS 564 GNA GTLVNAIL+HCSLP VA S G E++SD+++S+ D+ S G+ SR+ Sbjct: 168 GNATGTLVNAILNHCSLPMVATSTG------ENESDSDVSD---DEFSSIGVFSRVSEAP 218 Query: 565 IRPGIVHRLDKGTSGLLVIAKD 630 IRPGIVHRLDKGTSGLLV+AKD Sbjct: 219 IRPGIVHRLDKGTSGLLVVAKD 240 >ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform X1 [Glycine max] gi|571448797|ref|XP_006577958.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform X2 [Glycine max] Length = 450 Score = 284 bits (727), Expect(2) = e-135 Identities = 135/188 (71%), Positives = 157/188 (83%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH LSEQFKQRTI R+Y+SLTAGVP+P+AGR+EVP+GRD NNRIRM AV GP N ++ Sbjct: 257 HSHMKLSEQFKQRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKA 316 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 R+AASRYKVIE+L GG +LVEW+LETGRTHQIRAHAK+LG+PLLGDE+YGGTKSM LSL Sbjct: 317 RYAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDELYGGTKSMVLSL 376 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RTP S + ++VS+LDRPCLHA LGF+HPHTGE FSC PPADFAEILS LR Sbjct: 377 LRPRTPISLHSKIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRR 436 Query: 1211 INTEKPSF 1234 I +E SF Sbjct: 437 IGSETVSF 444 Score = 225 bits (574), Expect(2) = e-135 Identities = 124/207 (59%), Positives = 151/207 (72%), Gaps = 4/207 (1%) Frame = +1 Query: 22 SDQSQEPLSIQRGNYAGVRLQETVQK--GSEKXXXXXXXXXXXXCVSRARVQSSIRSGHV 195 SD EP + N++GVRL+E V GS K +SRARVQSSI+SG V Sbjct: 54 SDSDGEP----KLNFSGVRLEEAVDSRIGSGKLRLDNWISSRINGISRARVQSSIKSGLV 109 Query: 196 SVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVH 375 VNGRV++KVS +K GD++ CTI+ELQ LRA P++IPL+IVYED HVLV+NKPAHMVVH Sbjct: 110 HVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIVYEDEHVLVINKPAHMVVH 169 Query: 376 PAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSR-- 549 PAPGN +GTLVN ILHHC+LP V S E LS+ E DSD+E +++ SS EGL+SR Sbjct: 170 PAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTE-DSDDEFNSYISLASSCEGLNSRLS 228 Query: 550 ICGDSIRPGIVHRLDKGTSGLLVIAKD 630 + +SIRPGIVHRLDKGTSGLLV+AKD Sbjct: 229 VASNSIRPGIVHRLDKGTSGLLVVAKD 255 >ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] gi|561009207|gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] Length = 447 Score = 288 bits (738), Expect(2) = e-134 Identities = 137/188 (72%), Positives = 156/188 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH LSEQFKQRTI RVY+SLTAGVP P++GR++VP+GRDLNNR+RM AV GP N R+ Sbjct: 254 HSHMKLSEQFKQRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSRKA 313 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GG +LVEW+LETGRTHQIRAHAK+LG+PLLGDEVYGGTKSM LSL Sbjct: 314 RHAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSL 373 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ R+P S G + Q+VS LDRPCLHAL LGF+HPHTGE FSC PP DF EILS LR Sbjct: 374 LRPRSPISLHGKIVQMVSSLDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRR 433 Query: 1211 INTEKPSF 1234 I +E SF Sbjct: 434 IGSESVSF 441 Score = 220 bits (561), Expect(2) = e-134 Identities = 117/192 (60%), Positives = 141/192 (73%), Gaps = 2/192 (1%) Frame = +1 Query: 61 NYAGVRLQETVQK--GSEKXXXXXXXXXXXXCVSRARVQSSIRSGHVSVNGRVINKVSHV 234 N++G+RL+E V GS K +SRARVQSSI+SG V VNGRV++K S Sbjct: 62 NFSGLRLEEAVDSRIGSAKLRLDSWISSRINGISRARVQSSIKSGLVHVNGRVVDKASFN 121 Query: 235 IKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNA 414 +K GD++ CTI+ELQ LRA PE+IPL+IVYED HVLV+NKPAHMVVHPAPGN +GTLVN Sbjct: 122 VKAGDQIKCTIAELQKLRAVPENIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNG 181 Query: 415 ILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDSIRPGIVHRLD 594 ILHHC+LP V S E LS+ E D D+E++++ SS EG SR SIRPGIVHRLD Sbjct: 182 ILHHCNLPNVEFSKEEGLSDTE-DCDDEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLD 240 Query: 595 KGTSGLLVIAKD 630 KGTSGLLV+AKD Sbjct: 241 KGTSGLLVVAKD 252 >ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2, chloroplastic-like [Cucumis sativus] Length = 452 Score = 270 bits (691), Expect(2) = e-134 Identities = 132/185 (71%), Positives = 151/185 (81%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLS QFKQ +I RVYISLT GVP AGRIE+PI RD NNRIRM A+ G +N Sbjct: 242 HSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTNN-PHA 300 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 ++AASRY V+E+L GGS+LVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMA+SL Sbjct: 301 KYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSL 360 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ R ++C G L QLVS L+RPCLHAL LGF HPHTG+N +FSCPPP DF EILS LR Sbjct: 361 LRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRE 420 Query: 1211 INTEK 1225 I T+K Sbjct: 421 IGTQK 425 Score = 237 bits (605), Expect(2) = e-134 Identities = 129/202 (63%), Positives = 149/202 (73%) Frame = +1 Query: 25 DQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHVSVN 204 D+ E S + NYAG RL+ETV K +SRARVQSSIR+G VSVN Sbjct: 48 DEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVN 107 Query: 205 GRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAP 384 GRVI+KVSH +K GD +NCTISELQPLRAEPEDI L+IVYED HVLVVNKPAHMVVHPAP Sbjct: 108 GRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAP 167 Query: 385 GNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDS 564 GNA GTLVNAIL+HCSLP VA S G E++SD+++S+ D+ S G+ SR+ Sbjct: 168 GNATGTLVNAILNHCSLPMVATSTG------ENESDSDVSD---DEFSSIGVFSRVSEAP 218 Query: 565 IRPGIVHRLDKGTSGLLVIAKD 630 IRPGIVHRLDKGTSGLLV+AKD Sbjct: 219 IRPGIVHRLDKGTSGLLVVAKD 240 >emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] Length = 611 Score = 302 bits (774), Expect(2) = e-133 Identities = 145/185 (78%), Positives = 163/185 (88%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLSEQFK +IHRVYISLT+GVP+P++GR+E+P+GRD NNRIRM AVPGPSN Q Sbjct: 389 HSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQA 448 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GGSALVEWRLETGRTHQIRAHAK+LGIPLLGDEVYGGTK+MALSL Sbjct: 449 RHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSL 508 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ R P+S G L+QLVS+LDRPCLHA+ALGF HP TG+N FSC PP DFAEILS LR Sbjct: 509 LRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRK 568 Query: 1211 INTEK 1225 I+TEK Sbjct: 569 ISTEK 573 Score = 202 bits (515), Expect(2) = e-133 Identities = 126/236 (53%), Positives = 146/236 (61%), Gaps = 33/236 (13%) Frame = +1 Query: 22 SDQSQEPL---SIQRGNYAGVRLQETV---QKGSEKXXXXXXXXXXXXCVSRARVQSSIR 183 S+ + EPL S +R NYAGVRL+ETV S K +SRARVQSSIR Sbjct: 170 SNSTDEPLVSVSSRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIR 229 Query: 184 SGHVSVNGRVINK---------------------------VSHVIKVGDKVNCTISELQP 282 SG VSVN R+++K VSHVI+ GDKVNCTISELQP Sbjct: 230 SGLVSVNDRIVDKAMLVSRKFEVGEGKKIEEKDPITYSEQVSHVIRAGDKVNCTISELQP 289 Query: 283 LRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGE 462 LRAEPEDIPL+IVYED H VVHPAPGNA+GTLVN ILHHCSLPTVAL N + Sbjct: 290 LRAEPEDIPLDIVYEDEH----------VVHPAPGNASGTLVNGILHHCSLPTVALPNRD 339 Query: 463 ILSELEDDSDNEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKD 630 SE +D D+E ++F+ G + C +IRPGIVHRLDKGTSGLLV+AKD Sbjct: 340 --SEEDDILDDEFNSFA------AGQNCGTCETNIRPGIVHRLDKGTSGLLVVAKD 387 >ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum] gi|557086678|gb|ESQ27530.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum] Length = 432 Score = 272 bits (696), Expect(2) = e-132 Identities = 131/185 (70%), Positives = 153/185 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHL+EQFK TI RVYISLT+GVPSP GR+++PIGRD NNRIRM A+PG + + Sbjct: 246 HSHAHLAEQFKLHTIERVYISLTSGVPSPSQGRVDIPIGRDPNNRIRMAAIPGSLSRGKA 305 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE L GGGSALVEWRLETGRTHQIRAHAK++G+PLLGDEVYGGTKS+ALSL Sbjct: 306 RHAASRYKVIETLAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSVALSL 365 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 LQ R S + + +LVS++DRPCLHA+ LGF+HP TGE +FSCPPP+D AEI+ LLR Sbjct: 366 LQRRVSRSDQEQILELVSRMDRPCLHAIVLGFEHPCTGEVVKFSCPPPSDLAEIVGLLRR 425 Query: 1211 INTEK 1225 EK Sbjct: 426 SGREK 430 Score = 229 bits (584), Expect(2) = e-132 Identities = 126/199 (63%), Positives = 146/199 (73%), Gaps = 1/199 (0%) Frame = +1 Query: 37 EPLSIQRGNYAGVRLQETVQKGSE-KXXXXXXXXXXXXCVSRARVQSSIRSGHVSVNGRV 213 +P SI R N AG++L+ETV+ + K VSRARVQSSIR G VSVNGRV Sbjct: 57 KPESIPRVNNAGLKLEETVEAAVKAKIRLDSWISSRVHGVSRARVQSSIRLGLVSVNGRV 116 Query: 214 INKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAPGNA 393 ++KVSH +K GD+VNCTISELQPL+AEPEDIPL+IVYED H+LVVNKPAHMVVHPAPGN Sbjct: 117 VDKVSHNVKAGDEVNCTISELQPLKAEPEDIPLDIVYEDKHLLVVNKPAHMVVHPAPGNP 176 Query: 394 NGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDSIRP 573 GTLVN ILHHCSLP VA SN EDDSD E + + +S L++ S+RP Sbjct: 177 TGTLVNGILHHCSLPCVAYSNP------EDDSDEETLSDDEEMTSSSSLAA-----SVRP 225 Query: 574 GIVHRLDKGTSGLLVIAKD 630 GIVHRLDKGTSGLLV+AKD Sbjct: 226 GIVHRLDKGTSGLLVVAKD 244 >ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] gi|561009206|gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] Length = 458 Score = 288 bits (738), Expect(2) = e-132 Identities = 137/188 (72%), Positives = 156/188 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH LSEQFKQRTI RVY+SLTAGVP P++GR++VP+GRDLNNR+RM AV GP N R+ Sbjct: 265 HSHMKLSEQFKQRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSRKA 324 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GG +LVEW+LETGRTHQIRAHAK+LG+PLLGDEVYGGTKSM LSL Sbjct: 325 RHAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSL 384 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ R+P S G + Q+VS LDRPCLHAL LGF+HPHTGE FSC PP DF EILS LR Sbjct: 385 LRPRSPISLHGKIVQMVSSLDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRR 444 Query: 1211 INTEKPSF 1234 I +E SF Sbjct: 445 IGSESVSF 452 Score = 212 bits (539), Expect(2) = e-132 Identities = 117/203 (57%), Positives = 141/203 (69%), Gaps = 13/203 (6%) Frame = +1 Query: 61 NYAGVRLQETVQK--GSEKXXXXXXXXXXXXCVSRARVQSSIRSGHVSVNGRVINK---- 222 N++G+RL+E V GS K +SRARVQSSI+SG V VNGRV++K Sbjct: 62 NFSGLRLEEAVDSRIGSAKLRLDSWISSRINGISRARVQSSIKSGLVHVNGRVVDKKSKH 121 Query: 223 -------VSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPA 381 S +K GD++ CTI+ELQ LRA PE+IPL+IVYED HVLV+NKPAHMVVHPA Sbjct: 122 QPEQYALASFNVKAGDQIKCTIAELQKLRAVPENIPLDIVYEDEHVLVINKPAHMVVHPA 181 Query: 382 PGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGD 561 PGN +GTLVN ILHHC+LP V S E LS+ E D D+E++++ SS EG SR Sbjct: 182 PGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTE-DCDDEVNSYGSLASSCEGSHSRPSMS 240 Query: 562 SIRPGIVHRLDKGTSGLLVIAKD 630 SIRPGIVHRLDKGTSGLLV+AKD Sbjct: 241 SIRPGIVHRLDKGTSGLLVVAKD 263 >ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma cacao] gi|508723229|gb|EOY15126.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma cacao] Length = 409 Score = 270 bits (690), Expect(2) = e-132 Identities = 132/181 (72%), Positives = 153/181 (84%) Frame = +2 Query: 695 QFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYK 874 +FKQ TI RVYISLT GVPSP AGR+++ IGRD NNR+RM+AVPG ++ + RHAASRYK Sbjct: 228 KFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMIAVPGLNHHGRARHAASRYK 287 Query: 875 VIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPAS 1054 VIEVL GGGSAL++WRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMALSLL+ RTP + Sbjct: 288 VIEVLAGGGSALIQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMALSLLRPRTPPN 347 Query: 1055 CRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSF 1234 LS+LVS+L+RP LHAL LGF+HPH+ E FSC PP DFAEILS LR I TEKP+F Sbjct: 348 YNDQLSRLVSRLERPYLHALVLGFEHPHSREMMHFSCQPPPDFAEILSDLRKIGTEKPTF 407 Query: 1235 K 1237 K Sbjct: 408 K 408 Score = 230 bits (586), Expect(2) = e-132 Identities = 127/201 (63%), Positives = 149/201 (74%), Gaps = 1/201 (0%) Frame = +1 Query: 28 QSQEPLSIQRGNYAGVRLQETVQKGSE-KXXXXXXXXXXXXCVSRARVQSSIRSGHVSVN 204 ++QEP+ R +Y GV+L+ETV + K +SRARVQSSI+SG V+VN Sbjct: 41 KTQEPI---RTSYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVN 97 Query: 205 GRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAP 384 GRV++KVSH ++ GDKVNC ISELQPLRAEPEDIPL+IVYED HVLVVNKP HMVVHPAP Sbjct: 98 GRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAP 157 Query: 385 GNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDS 564 GNA GTLVN ILHHCSLPTVALS E+LS+ ED SD+ D+ G S+ S Sbjct: 158 GNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDD-------DEGFCYGASA---AAS 207 Query: 565 IRPGIVHRLDKGTSGLLVIAK 627 +RPGIVHRLDKGTSGLLV+AK Sbjct: 208 VRPGIVHRLDKGTSGLLVVAK 228 >ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda] gi|548833830|gb|ERM96267.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda] Length = 452 Score = 268 bits (685), Expect(2) = e-131 Identities = 131/183 (71%), Positives = 148/183 (80%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHAHLSEQFK TIHR YISLT GVPSP G IE+PI RD+NNRIRM AV G +N R+ Sbjct: 251 HSHAHLSEQFKLHTIHRQYISLTCGVPSPSNGCIEIPIARDMNNRIRMAAVSGQNNTRKA 310 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 R A SRY V+EVL GGGSALVEWRL+TGRTHQIR HAK++G PLLGDEVYGGTKSMALS Sbjct: 311 RLATSRYHVMEVLAGGGSALVEWRLQTGRTHQIRVHAKYIGNPLLGDEVYGGTKSMALSR 370 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RTP+ G LSQLVS L RPCLHA +LGFKHPH+ EN F+CPPP DFAE+L L++ Sbjct: 371 LRPRTPSHYHGPLSQLVSNLQRPCLHAFSLGFKHPHSKENVLFTCPPPPDFAEVLRQLQS 430 Query: 1211 INT 1219 I + Sbjct: 431 IRS 433 Score = 231 bits (588), Expect(2) = e-131 Identities = 115/189 (60%), Positives = 140/189 (74%) Frame = +1 Query: 64 YAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHVSVNGRVINKVSHVIKV 243 Y G++ + +V GS+K VSRAR+QSSIR G V VNG I KVSH++KV Sbjct: 67 YGGLQFESSVAVGSKKERIDSWLSARIGDVSRARIQSSIRQGFVKVNGLPITKVSHIVKV 126 Query: 244 GDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILH 423 GD V+CT+S LQPL+AEPED+PL+I+YED HVLVVNKPAHMVVHPAPGNANGTLVN ILH Sbjct: 127 GDMVDCTVSHLQPLKAEPEDMPLDIIYEDDHVLVVNKPAHMVVHPAPGNANGTLVNGILH 186 Query: 424 HCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGT 603 HC+LP L +GE+ SE +D+ DN ++ F+ D S + C SIRPGIVHRLDKGT Sbjct: 187 HCTLPAFGLPDGELTSESDDECDNGLTMFNPDPISTQ------CRSSIRPGIVHRLDKGT 240 Query: 604 SGLLVIAKD 630 SGLLV+AK+ Sbjct: 241 SGLLVVAKN 249 >ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer arietinum] Length = 438 Score = 273 bits (699), Expect(2) = e-131 Identities = 130/184 (70%), Positives = 151/184 (82%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH LSEQFK RTI RVYISLTAGVP+P+AGR+EVP+GRD NNR+RM AV GP + Sbjct: 255 HSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKA 314 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKVIE+L GG ALVEW+LETGRTHQIRAHA++LG+PLLGDEVYGGTK+M LSL Sbjct: 315 RHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSL 374 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RT S G ++++VS+LDRPCLHA+ LGF+HPHTGE FSC PP DF EILS LR Sbjct: 375 LRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRR 434 Query: 1211 INTE 1222 I + Sbjct: 435 IGRQ 438 Score = 225 bits (574), Expect(2) = e-131 Identities = 122/205 (59%), Positives = 150/205 (73%), Gaps = 2/205 (0%) Frame = +1 Query: 22 SDQSQEPLSIQRGNYAGVRLQETV--QKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHV 195 S+ + EP S NYAGVRL+E V + S K +SRARVQSSI++G V Sbjct: 54 SNSNGEPKS----NYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLV 109 Query: 196 SVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVH 375 VNGR+++KVS ++ GD++ CTI+ELQ LRA PE+IPL+IVYED H+LV+NKPAHMVVH Sbjct: 110 HVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVH 169 Query: 376 PAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRIC 555 PAPGN +GTLVN ILHHC+LP V S E LS+ E DSD+E++ F+ S EGL SR+ Sbjct: 170 PAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTE-DSDDELNGFTSQAPSCEGLDSRLS 228 Query: 556 GDSIRPGIVHRLDKGTSGLLVIAKD 630 SIRPGIVHRLDKGTSGLLV+AKD Sbjct: 229 IASIRPGIVHRLDKGTSGLLVVAKD 253 >gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus] Length = 432 Score = 270 bits (691), Expect(2) = e-130 Identities = 128/185 (69%), Positives = 155/185 (83%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH+HL+EQFK+ T+ RVY+SLT GVPSP++GR+++PIGRD NNRIRMVA+PG + + Sbjct: 237 HSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAIPGSALHGKA 296 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHA SRYKV+E+L GGG ALVEWRLETGRTHQIRAHAK+LGIPLLGD+VYGGTK MALS Sbjct: 297 RHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKHMALSQ 356 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 LQ + +S G + QLV+KL+RP LHAL+LGF+HPH GE+ FS PP DFAEIL LRN Sbjct: 357 LQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQMPPFDFAEILDCLRN 416 Query: 1211 INTEK 1225 I++EK Sbjct: 417 ISSEK 421 Score = 225 bits (574), Expect(2) = e-130 Identities = 125/205 (60%), Positives = 148/205 (72%) Frame = +1 Query: 16 SVSDQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHV 195 S SD SQ+ +S + N++G +++ETV S K +SRARVQSSIRSG V Sbjct: 43 SDSDDSQDSISGRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLV 102 Query: 196 SVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVH 375 SVNG VI+KVSHV++ GD VNCTI+ELQPLRAEPE+IPL+IVYED H+LVVNKPAHMVVH Sbjct: 103 SVNGHVISKVSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVH 162 Query: 376 PAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRIC 555 PAPGNANGTLVN ILHHC L TV N E L + DD D S+D+++ S Sbjct: 163 PAPGNANGTLVNGILHHCRLSTVCF-NPESLPDNIDDDD------SIDEATVFPSES--- 212 Query: 556 GDSIRPGIVHRLDKGTSGLLVIAKD 630 S+RPGIVHRLDKGTSGLLV+AKD Sbjct: 213 --SVRPGIVHRLDKGTSGLLVVAKD 235 >gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus] Length = 422 Score = 270 bits (691), Expect(2) = e-130 Identities = 128/185 (69%), Positives = 155/185 (83%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSH+HL+EQFK+ T+ RVY+SLT GVPSP++GR+++PIGRD NNRIRMVA+PG + + Sbjct: 237 HSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAIPGSALHGKA 296 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHA SRYKV+E+L GGG ALVEWRLETGRTHQIRAHAK+LGIPLLGD+VYGGTK MALS Sbjct: 297 RHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKHMALSQ 356 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 LQ + +S G + QLV+KL+RP LHAL+LGF+HPH GE+ FS PP DFAEIL LRN Sbjct: 357 LQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQMPPFDFAEILDCLRN 416 Query: 1211 INTEK 1225 I++EK Sbjct: 417 ISSEK 421 Score = 225 bits (574), Expect(2) = e-130 Identities = 125/205 (60%), Positives = 148/205 (72%) Frame = +1 Query: 16 SVSDQSQEPLSIQRGNYAGVRLQETVQKGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHV 195 S SD SQ+ +S + N++G +++ETV S K +SRARVQSSIRSG V Sbjct: 43 SDSDDSQDSISGRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLV 102 Query: 196 SVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVH 375 SVNG VI+KVSHV++ GD VNCTI+ELQPLRAEPE+IPL+IVYED H+LVVNKPAHMVVH Sbjct: 103 SVNGHVISKVSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVH 162 Query: 376 PAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRIC 555 PAPGNANGTLVN ILHHC L TV N E L + DD D S+D+++ S Sbjct: 163 PAPGNANGTLVNGILHHCRLSTVCF-NPESLPDNIDDDD------SIDEATVFPSES--- 212 Query: 556 GDSIRPGIVHRLDKGTSGLLVIAKD 630 S+RPGIVHRLDKGTSGLLV+AKD Sbjct: 213 --SVRPGIVHRLDKGTSGLLVVAKD 235 >ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor] gi|241917257|gb|EER90401.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor] Length = 441 Score = 265 bits (676), Expect(2) = e-130 Identities = 130/183 (71%), Positives = 149/183 (81%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHA L+EQFK TI RVYISLT GVP+P +GRIE I RD NNRIRM+A+ G S R Sbjct: 250 HSHAQLAEQFKLHTIRRVYISLTCGVPNPNSGRIEASIARDPNNRIRMIAIAG-SGHRYA 308 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKV EV VGGGSALVEWRLETGRTHQIRAHAK++GIPLLGDE YGGTKSMALSL Sbjct: 309 RHAASRYKVREVFVGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDETYGGTKSMALSL 368 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RTP+ +LS L+SK+DRPCLHA LGFKHPH+G+ +FSCPPP DF+E+L LR Sbjct: 369 LRPRTPSKYHSDLSNLISKVDRPCLHAALLGFKHPHSGKILEFSCPPPDDFSEVLDELRK 428 Query: 1211 INT 1219 + + Sbjct: 429 VTS 431 Score = 229 bits (584), Expect(2) = e-130 Identities = 120/208 (57%), Positives = 149/208 (71%), Gaps = 3/208 (1%) Frame = +1 Query: 16 SVSDQSQEPLSIQRGNYAGVRLQETVQ--KGSEKXXXXXXXXXXXXCVSRARVQSSIRSG 189 + S ++ EP ++G + G+RL+E V +G + VSRARVQ+SIR+G Sbjct: 41 NASAEAAEPAESRKGGHGGMRLEEAVPVGEGRSRIDAWISARLGGGGVSRARVQASIRAG 100 Query: 190 HVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMV 369 V+VNGR ++KVSH +K GD V+CT+SELQPLRAE EDIPL+IVYED HVLVVNKPAHMV Sbjct: 101 LVAVNGRPVSKVSHTVKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMV 160 Query: 370 VHPAPGNANGTLVNAILHHCSLPT-VALSNGEILSELEDDSDNEISNFSLDQSSREGLSS 546 VHPAPGNANGTLVNAILHHC + T L+ E D SD++I F++DQ + E SS Sbjct: 161 VHPAPGNANGTLVNAILHHCKISTFTCLARSSTGDECLDSSDDDIDVFNVDQFATEDASS 220 Query: 547 RICGDSIRPGIVHRLDKGTSGLLVIAKD 630 + +RPGIVHRLDKGTSGLLV+AKD Sbjct: 221 EVRNALVRPGIVHRLDKGTSGLLVVAKD 248 >ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza brachyantha] Length = 442 Score = 262 bits (669), Expect(2) = e-129 Identities = 129/181 (71%), Positives = 147/181 (81%) Frame = +2 Query: 671 HSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQV 850 HSHA L+EQFK TI RVYISLT G P+P +GRIEVPI RD NNRIRM+A PG S R Sbjct: 247 HSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPG-SGHRYA 305 Query: 851 RHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSL 1030 RHAASRYKV EV GGGSALVEW+LETGRTHQIRAHAK+LGIPLLGDE YGGTKSMALSL Sbjct: 306 RHAASRYKVREVFAGGGSALVEWKLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALSL 365 Query: 1031 LQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRN 1210 L+ RT + +LS L++K+DRPCLHA LGFKHPH+G+ +FSCPPP DF E+L+ LR Sbjct: 366 LRPRTSSRYHCDLSNLIAKIDRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELRR 425 Query: 1211 I 1213 + Sbjct: 426 V 426 Score = 229 bits (585), Expect(2) = e-129 Identities = 121/206 (58%), Positives = 148/206 (71%), Gaps = 3/206 (1%) Frame = +1 Query: 22 SDQSQEPLSIQRGNYAGVRLQETVQ--KGSEKXXXXXXXXXXXXCVSRARVQSSIRSGHV 195 SD + E S +RG + G RL+E V +G + VSRARVQ+SIR+G V Sbjct: 40 SDANAEAASSRRGGHGGTRLEEAVPAGEGRSRIDAWISSRLGGGGVSRARVQASIRAGLV 99 Query: 196 SVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVH 375 +VNGR ++KVSH++K GD V+CT+SELQPLRAEPEDIPL+IVYED H+LVVNKPAHMVVH Sbjct: 100 AVNGRPVSKVSHMVKGGDMVSCTVSELQPLRAEPEDIPLDIVYEDQHLLVVNKPAHMVVH 159 Query: 376 PAPGNANGTLVNAILHHCSLPT-VALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRI 552 PAPGNANGTLVNAILHHC + T L+ E D SD++I F +DQ + +SS + Sbjct: 160 PAPGNANGTLVNAILHHCKISTFTCLARNSTDDECPDSSDDDIDVFHVDQFTTGEVSSEV 219 Query: 553 CGDSIRPGIVHRLDKGTSGLLVIAKD 630 +RPGIVHRLDKGTSGLLV+AKD Sbjct: 220 REALVRPGIVHRLDKGTSGLLVVAKD 245