BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00020560
         (903 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   291   2e-76
ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theob...   286   1e-74
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   275   2e-71
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an...   273   7e-71
ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [A...   272   1e-70
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an...   270   4e-70
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an...   270   7e-70
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr...   270   7e-70
gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus...   266   1e-68
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [...   265   2e-68
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise...   257   5e-66
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   248   2e-63
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ...   244   3e-62
ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutr...   244   3e-62
ref|NP_001047973.2| Os02g0723600 [Oryza sativa Japonica Group] g...   241   2e-61
gb|EEC73912.1| hypothetical protein OsI_08749 [Oryza sativa Indi...   241   2e-61
ref|XP_006654023.1| PREDICTED: DNA-directed RNA polymerases I an...   241   3e-61
ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I an...   241   3e-61
gb|ABF95432.1| RNA polymerase Rpb3/Rpb11 dimerisation domain con...   241   3e-61
ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group] g...   241   3e-61

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
           [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
           protein product [Vitis vinifera]
          Length = 372

 Score =  291 bits (746), Expect = 2e-76
 Identities = 143/177 (80%), Positives = 159/177 (89%)
 Frame = +3

Query: 372 MPRVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQ 551
           M R  ALDMPDVP GQLPPHIELQRTRVLC  DAP+ TE +QYSGAY+SMGVDNSL +DQ
Sbjct: 1   MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ 60

Query: 552 FFKNFKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDE 731
           F  NF+V+VIRL+ED+MEFDMI +D SIANAFRRILI+E+PTMAIEKVLIANNTS+VQDE
Sbjct: 61  FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE 120

Query: 732 VLAHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           VLAHRLGLIPI  DPR+F+ LSENDTPNEKNTIVF LHV+CERG PRLTVKS+ELKW
Sbjct: 121 VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKW 177


>ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
           gi|508720072|gb|EOY11969.1| RNA polymerase I subunit 43
           isoform 1 [Theobroma cacao]
          Length = 383

 Score =  286 bits (731), Expect = 1e-74
 Identities = 138/175 (78%), Positives = 155/175 (88%)
 Frame = +3

Query: 378 RVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFF 557
           + S  D+PDVP GQLPPH+ELQRTRVLC  DAP  TE + YSGAYASMGVDNSL LD F 
Sbjct: 14  KFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLDHFC 73

Query: 558 KNFKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVL 737
            NF+V+V+RL E++MEFDMI +DA+IANAFRRILI+E+PTMAIEKVLIANNTSVVQDEVL
Sbjct: 74  HNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQDEVL 133

Query: 738 AHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           AHRLGLIPI VDPR+FEY+SEND PNEKNTIVFKLHV C+RG PR+TVKSDELKW
Sbjct: 134 AHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKW 188


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
           communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
           polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  275 bits (703), Expect = 2e-71
 Identities = 133/175 (76%), Positives = 153/175 (87%)
 Frame = +3

Query: 378 RVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFF 557
           + S  D+PDVPMGQLPPH++LQRTRV+C  DAP  T+ I YSGAYAS+GVDNSL LD F 
Sbjct: 13  KFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFR 72

Query: 558 KNFKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVL 737
            NFKV+VI+L +D+MEFDMI +DA+IANAFRRILISE+PTMAIEKVLIANNTS++QDEVL
Sbjct: 73  DNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVL 132

Query: 738 AHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           AHRLGLIPI  DPR+FEYLS NDTPNEKNTIVFKLH  C+RG+PR TV S+ELKW
Sbjct: 133 AHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKW 187


>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Solanum lycopersicum]
          Length = 393

 Score =  273 bits (698), Expect = 7e-71
 Identities = 129/175 (73%), Positives = 152/175 (86%)
 Frame = +3

Query: 378 RVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFF 557
           +VS  D+PD+P G+LPPHIELQRTRVLC   AP+ TE + YSGAYA+MGVDNS+  +QF 
Sbjct: 24  KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83

Query: 558 KNFKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVL 737
            NFKV+++RL EDE+EFDMI +D S+ANAFRRILI+E+PTMAIEKVLIANNTS++QDEVL
Sbjct: 84  DNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVL 143

Query: 738 AHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           AHRLGLIPIKVDPR+FEY+SEND PNEKNTIVFKLHV+C +G  RL V S ELKW
Sbjct: 144 AHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLRVLSSELKW 198


>ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [Amborella trichopoda]
           gi|548861841|gb|ERN19212.1| hypothetical protein
           AMTR_s00061p00192780 [Amborella trichopoda]
          Length = 304

 Score =  272 bits (695), Expect = 1e-70
 Identities = 139/188 (73%), Positives = 155/188 (82%), Gaps = 11/188 (5%)
 Frame = +3

Query: 372 MPRVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQ 551
           MPRVSALDMPDVP GQLP H+  QRTRVLCA DA   TE IQYSGAYASMGVDNSL L++
Sbjct: 1   MPRVSALDMPDVPKGQLPEHLNFQRTRVLCASDAALHTEGIQYSGAYASMGVDNSLNLEK 60

Query: 552 FFKNFKVDVIRLNEDE-----------MEFDMISVDASIANAFRRILISEVPTMAIEKVL 698
           F +NFKV+VI + ++E           +EFDM+ +DAS+ANAFRRILI+EVPTMAIEKVL
Sbjct: 61  FCENFKVEVIDIKDEESSGTDWDKENSIEFDMVGIDASLANAFRRILIAEVPTMAIEKVL 120

Query: 699 IANNTSVVQDEVLAHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLT 878
           IANNTSVVQDEVLAHRLGLIPIKVDPR+FEY SEND   EKNTIVFKLHVKC +   RLT
Sbjct: 121 IANNTSVVQDEVLAHRLGLIPIKVDPRLFEYKSENDAATEKNTIVFKLHVKCGKDSTRLT 180

Query: 879 VKSDELKW 902
           VKSD+LKW
Sbjct: 181 VKSDQLKW 188


>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Solanum tuberosum]
          Length = 393

 Score =  270 bits (691), Expect = 4e-70
 Identities = 127/175 (72%), Positives = 151/175 (86%)
 Frame = +3

Query: 378 RVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFF 557
           +VS  D+PD+P G+LPPHIELQRTRVLC   AP+ TE + YSGAYA+MGVDNS+  +QF 
Sbjct: 24  KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83

Query: 558 KNFKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVL 737
            NFKV+++RL EDE+EFDMI +D S+ANAFRRILI+E+PTMAIEKVLIANNTS++QDEVL
Sbjct: 84  NNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVL 143

Query: 738 AHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           AHRLGLIPI+VDPR+FEY+SEND PNEKNTIVFKLH +C +G  RL V S ELKW
Sbjct: 144 AHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLRVLSSELKW 198


>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Citrus sinensis]
          Length = 382

 Score =  270 bits (689), Expect = 7e-70
 Identities = 134/173 (77%), Positives = 151/173 (87%)
 Frame = +3

Query: 384 SALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKN 563
           S  D+PDVP  +LPPHIE QRTRV C  DAP  TE + YSGAYASMGVDNSL LD F  N
Sbjct: 17  SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 75

Query: 564 FKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAH 743
           F+V+VIRL +D+MEFD+I +DA+IANAFRRILI+E+PTMAIEKVLIANNTSV+QDEVLAH
Sbjct: 76  FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 135

Query: 744 RLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           RLGLIPI VDPR+FEY+SENDT NEKNTIVFKLHV CERG PRLTVK++ELKW
Sbjct: 136 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKW 188


>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
           gi|557555856|gb|ESR65870.1| hypothetical protein
           CICLE_v10008413mg [Citrus clementina]
          Length = 421

 Score =  270 bits (689), Expect = 7e-70
 Identities = 134/173 (77%), Positives = 151/173 (87%)
 Frame = +3

Query: 384 SALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKN 563
           S  D+PDVP  +LPPHIE QRTRV C  DAP  TE + YSGAYASMGVDNSL LD F  N
Sbjct: 56  SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 114

Query: 564 FKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAH 743
           F+V+VIRL +D+MEFD+I +DA+IANAFRRILI+E+PTMAIEKVLIANNTSV+QDEVLAH
Sbjct: 115 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 174

Query: 744 RLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           RLGLIPI VDPR+FEY+SENDT NEKNTIVFKLHV CERG PRLTVK++ELKW
Sbjct: 175 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKW 227


>gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus guttatus]
          Length = 381

 Score =  266 bits (679), Expect = 1e-68
 Identities = 126/175 (72%), Positives = 148/175 (84%)
 Frame = +3

Query: 378 RVSALDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFF 557
           ++   D+PDVP G LP H+ELQRTR +C  DAP  TE IQYSGAYASMGVDNS+  ++F 
Sbjct: 12  KIPVWDLPDVPSGNLPAHLELQRTRTVCTNDAPIHTENIQYSGAYASMGVDNSMRFEKFC 71

Query: 558 KNFKVDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVL 737
           KNF+V+VIRL +DEMEFDM+ +DAS+ANAFRRILISE+PTMAIE VL+ANNTSVVQDEVL
Sbjct: 72  KNFRVEVIRLGDDEMEFDMVGIDASLANAFRRILISELPTMAIENVLVANNTSVVQDEVL 131

Query: 738 AHRLGLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           AHRLGLIP+KVDPR+F Y SEND P+EKNTIVFKLH +CE+   R+ VKS ELKW
Sbjct: 132 AHRLGLIPLKVDPRLFNYKSENDQPSEKNTIVFKLHSRCEKKSSRINVKSSELKW 186


>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 390

 Score =  265 bits (677), Expect = 2e-68
 Identities = 128/170 (75%), Positives = 146/170 (85%)
 Frame = +3

Query: 393 DMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKV 572
           ++ DV  GQLPPHI  Q TRV C PDAP+ TE +QYSG+YASMGVDNSL LD F +NF++
Sbjct: 30  NLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRI 89

Query: 573 DVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLG 752
            VI L++D+MEFDMI +DA++ANAFRRILISEVPTMAIEKV IANNTSV+QDEVLAHRLG
Sbjct: 90  KVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLG 149

Query: 753 LIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           LIPIKVDPR+FEYLS NDTPNEKNTIV KLH +C RGQPR +V S ELKW
Sbjct: 150 LIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQELKW 199


>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
          Length = 364

 Score =  257 bits (656), Expect = 5e-66
 Identities = 120/170 (70%), Positives = 148/170 (87%)
 Frame = +3

Query: 393 DMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKV 572
           D+PDVP G+LPPH++LQRTRVLC  +AP+ TE IQYSGAYA MGVDNSL  D F +NF+V
Sbjct: 3   DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62

Query: 573 DVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLG 752
           +++ ++E ++EFD+I +DA+IANAFRRILI+E+PTMAIEKVLIANNTSV+ DEVL+HRLG
Sbjct: 63  EIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHRLG 122

Query: 753 LIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           LIP+KVDPR F ++SE+D PNEKNT+VFKLHV CER   R TVK+DELKW
Sbjct: 123 LIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKW 172


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Cucumis sativus]
           gi|449522768|ref|XP_004168398.1| PREDICTED: DNA-directed
           RNA polymerases I and III subunit RPAC1-like [Cucumis
           sativus]
          Length = 391

 Score =  248 bits (633), Expect = 2e-63
 Identities = 122/171 (71%), Positives = 144/171 (84%)
 Frame = +3

Query: 390 LDMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFK 569
           +++PDVPM +LPPH+ELQRTRV C  DAP  T+ IQYSGA+ASMG DNSL LD F  NFK
Sbjct: 30  MNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFK 88

Query: 570 VDVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRL 749
           ++VI L ED++EFDMI +D ++ANAFRRILISEVPTMAIEKVL ANNTS+VQDEVLAHRL
Sbjct: 89  IEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRL 148

Query: 750 GLIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           GL+PI+VDPR+F+Y S+ D PNE NTIVF+LH  CERG+PRLTV S  L W
Sbjct: 149 GLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTW 198


>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
           gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 385

 Score =  244 bits (624), Expect = 3e-62
 Identities = 121/170 (71%), Positives = 138/170 (81%)
 Frame = +3

Query: 393 DMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKV 572
           D+PDVP G LPPH+ELQRTR +C  DAP     + YSGAYASMGVDNS+ L+ F ++FKV
Sbjct: 25  DLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDFKV 83

Query: 573 DVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLG 752
           DVI L E  M FDMI V A IANAFRRIL++E+P+MAIEKV +ANNTSV+QDEVLAHRLG
Sbjct: 84  DVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHRLG 143

Query: 753 LIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           LIPI  DPR+FEYLSEND PNEKNTIVFKLHVKC +G PR  V + ELKW
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKW 193


>ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutrema salsugineum]
           gi|557115433|gb|ESQ55716.1| hypothetical protein
           EUTSA_v10025407mg [Eutrema salsugineum]
          Length = 394

 Score =  244 bits (623), Expect = 3e-62
 Identities = 120/170 (70%), Positives = 141/170 (82%)
 Frame = +3

Query: 393 DMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKV 572
           D PDVP  +LPPH+ELQRTRVLC  DAP  T  +QYSGAY  +GVDNS+ L+ F +NF+V
Sbjct: 17  DHPDVP-ARLPPHLELQRTRVLCKNDAPIHTSSVQYSGAYKFVGVDNSVKLESFSENFRV 75

Query: 573 DVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLG 752
           DVI  +  E+EFDMI +DA+IANAFRRIL++E+PTMAIEKV +ANNTSVVQDEVLA R+G
Sbjct: 76  DVISEDGMELEFDMIGIDAAIANAFRRILLAELPTMAIEKVFVANNTSVVQDEVLAQRMG 135

Query: 753 LIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           LIPI  DPR+FEYLSEND PNEKNTIVFKLH KCE+G+PRL V + EL W
Sbjct: 136 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHAKCEKGEPRLKVLTKELIW 185


>ref|NP_001047973.2| Os02g0723600 [Oryza sativa Japonica Group]
           gi|45736002|dbj|BAD13030.1| putative RNA polymerase
           subunit [Oryza sativa Japonica Group]
           gi|222623582|gb|EEE57714.1| hypothetical protein
           OsJ_08197 [Oryza sativa Japonica Group]
           gi|255671218|dbj|BAF09887.2| Os02g0723600 [Oryza sativa
           Japonica Group]
          Length = 300

 Score =  241 bits (616), Expect = 2e-61
 Identities = 111/162 (68%), Positives = 140/162 (86%)
 Frame = +3

Query: 417 QLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKVDVIRLNED 596
           +LP H+E+QRTRV+C  DAP  TE  QY+GAY++MG+DNS+  ++F KNFKV++ RL ED
Sbjct: 21  KLPEHLEVQRTRVVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80

Query: 597 EMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLGLIPIKVDP 776
           +MEFDMI +DASIANAFRRILI+E+PTMAIEKVL+ +NTSV+ DEVL+HRLGLIP+  DP
Sbjct: 81  DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140

Query: 777 RMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           R FEY+SEND PNE+NTIV+KLHV C++G PRLTVKS +L+W
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEW 182


>gb|EEC73912.1| hypothetical protein OsI_08749 [Oryza sativa Indica Group]
          Length = 332

 Score =  241 bits (616), Expect = 2e-61
 Identities = 111/162 (68%), Positives = 140/162 (86%)
 Frame = +3

Query: 417 QLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKVDVIRLNED 596
           +LP H+E+QRTRV+C  DAP  TE  QY+GAY++MG+DNS+  ++F KNFKV++ RL ED
Sbjct: 21  KLPEHLEVQRTRVVCKADAPVNTEGFQYAGAYSAMGIDNSVSAEKFCKNFKVEISRLTED 80

Query: 597 EMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLGLIPIKVDP 776
           +MEFDMI +DASIANAFRRILI+E+PTMAIEKVL+ +NTSV+ DEVL+HRLGLIP+  DP
Sbjct: 81  DMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRLGLIPLDADP 140

Query: 777 RMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           R FEY+SEND PNE+NTIV+KLHV C++G PRLTVKS +L+W
Sbjct: 141 RHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDLEW 182


>ref|XP_006654023.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           rpac1-like [Oryza brachyantha]
          Length = 374

 Score =  241 bits (615), Expect = 3e-61
 Identities = 111/162 (68%), Positives = 141/162 (87%)
 Frame = +3

Query: 417 QLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKVDVIRLNED 596
           +LP H+ELQRTRV+C  D P  TE  QY GA+++MG+DNS+ +D+F K+FKV++ RL ED
Sbjct: 25  KLPEHLELQRTRVVCKFDGPVNTEGFQYGGAFSAMGIDNSVSVDKFCKDFKVEIKRLTED 84

Query: 597 EMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLGLIPIKVDP 776
           ++EFDMI +DAS+ANAFRRILI+EVPTMAIEKVLIA+N+SV+ DEVLAHRLGLIP+  DP
Sbjct: 85  DVEFDMIGIDASVANAFRRILIAEVPTMAIEKVLIADNSSVIADEVLAHRLGLIPLDADP 144

Query: 777 RMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           R+FEY+SEND PNE+NTIV+KLHV C++G PRLTVKS +L+W
Sbjct: 145 RLFEYISENDAPNERNTIVYKLHVSCKKGSPRLTVKSGDLEW 186


>ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           rpac1-like [Setaria italica]
          Length = 372

 Score =  241 bits (615), Expect = 3e-61
 Identities = 115/171 (67%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
 Frame = +3

Query: 393 DMPDVPMGQLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKV 572
           D+ D    +LP H+ELQRTRV+C  DAP  T+  QYSGA+  MGVDNS+ +++F KNFK+
Sbjct: 14  DVLDQQENKLPDHLELQRTRVVCNADAPIHTQGYQYSGAFTVMGVDNSVSVEKFCKNFKI 73

Query: 573 DVIRLNEDEMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLG 752
           D+ RL ED+MEFDMI VDASIANAFRRILISEVPTMAIEK+ +A+NTSV+ DEVL+HRLG
Sbjct: 74  DIKRLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVIADEVLSHRLG 133

Query: 753 LIPIKVDPRMFEYLSENDTPNEKNTIVFKLHVKC-ERGQPRLTVKSDELKW 902
           LIP+  DPR+F+Y+SEND PNE+NTIV+KLHV C ++G PR+TVKS EL+W
Sbjct: 134 LIPLDADPRLFDYISENDVPNERNTIVYKLHVSCPKKGSPRITVKSGELEW 184


>gb|ABF95432.1| RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein,
           expressed [Oryza sativa Japonica Group]
          Length = 352

 Score =  241 bits (615), Expect = 3e-61
 Identities = 113/162 (69%), Positives = 140/162 (86%)
 Frame = +3

Query: 417 QLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKVDVIRLNED 596
           +LP H+E+QRTRV+C  DAP  TE  QY+GA+A+MG+DNS+  D+F KNFKV V RL ED
Sbjct: 23  KLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82

Query: 597 EMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLGLIPIKVDP 776
           +MEFDMI +DAS+ANAFRRILI+EVPTMAIEKVL+A+NTSV+ DEVL+HRLGLIP+  DP
Sbjct: 83  DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142

Query: 777 RMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           R+FEY+SEND P E+NTIV+KLHV C++G PRLTVKS +L+W
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEW 184


>ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group]
           gi|108707636|gb|ABF95431.1| RNA polymerase Rpb3/Rpb11
           dimerisation domain containing protein, expressed [Oryza
           sativa Japonica Group] gi|113548294|dbj|BAF11737.1|
           Os03g0295400 [Oryza sativa Japonica Group]
           gi|222624742|gb|EEE58874.1| hypothetical protein
           OsJ_10475 [Oryza sativa Japonica Group]
          Length = 379

 Score =  241 bits (615), Expect = 3e-61
 Identities = 113/162 (69%), Positives = 140/162 (86%)
 Frame = +3

Query: 417 QLPPHIELQRTRVLCAPDAPSQTEKIQYSGAYASMGVDNSLCLDQFFKNFKVDVIRLNED 596
           +LP H+E+QRTRV+C  DAP  TE  QY+GA+A+MG+DNS+  D+F KNFKV V RL ED
Sbjct: 23  KLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLTED 82

Query: 597 EMEFDMISVDASIANAFRRILISEVPTMAIEKVLIANNTSVVQDEVLAHRLGLIPIKVDP 776
           +MEFDMI +DAS+ANAFRRILI+EVPTMAIEKVL+A+NTSV+ DEVL+HRLGLIP+  DP
Sbjct: 83  DMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDADP 142

Query: 777 RMFEYLSENDTPNEKNTIVFKLHVKCERGQPRLTVKSDELKW 902
           R+FEY+SEND P E+NTIV+KLHV C++G PRLTVKS +L+W
Sbjct: 143 RLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEW 184