BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00020320
         (1721 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007218862.1| hypothetical protein PRUPE_ppa002838mg [Prun...   690   0.0  
ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containi...   675   0.0  
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   670   0.0  
emb|CBI23791.3| unnamed protein product [Vitis vinifera]              670   0.0  
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...   657   0.0  
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...   657   0.0  
gb|EYU26534.1| hypothetical protein MIMGU_mgv1a024701mg, partial...   655   0.0  
gb|EXB37797.1| hypothetical protein L484_002732 [Morus notabilis]     648   0.0  
ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_007042234.1| Mitochondrial editing factor 21 [Theobroma c...   549   e-153
gb|ABR17838.1| unknown [Picea sitchensis]                             465   e-128
gb|EYU24286.1| hypothetical protein MIMGU_mgv1a025107mg [Mimulus...   463   e-128
gb|EYU18955.1| hypothetical protein MIMGU_mgv1a022111mg [Mimulus...   462   e-127
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   459   e-126
ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutr...   459   e-126
gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]     457   e-126
ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containi...   454   e-125
ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily p...   454   e-125
ref|NP_173449.1| pentatricopeptide repeat-containing protein [Ar...   454   e-125
ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Caps...   452   e-124

>ref|XP_007218862.1| hypothetical protein PRUPE_ppa002838mg [Prunus persica]
            gi|462415324|gb|EMJ20061.1| hypothetical protein
            PRUPE_ppa002838mg [Prunus persica]
          Length = 628

 Score =  690 bits (1781), Expect = 0.0
 Identities = 333/433 (76%), Positives = 377/433 (87%), Gaps = 1/433 (0%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            MK+G I  AE+LF +M  +NI+SWTAMISGY+QNGL ++AL LF+EM R+DSEVKPNWVT
Sbjct: 196  MKDGEICFAEDLFRRMPCKNIVSWTAMISGYTQNGLAEQALVLFDEMLRKDSEVKPNWVT 255

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            IMSVLPAC HSAALE GR+IHN+A+R GL S +S+ TAL+AMYAKCGSL DAR CFE + 
Sbjct: 256  IMSVLPACAHSAALERGRQIHNFASRTGLDSNTSIQTALLAMYAKCGSLSDARQCFERVH 315

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
              E  L+AWNTMI+AYASHG G EAVSTFEDMI AG+QPD I+FTGLLSGCSHSGLVD G
Sbjct: 316  QTENSLVAWNTMITAYASHGRGSEAVSTFEDMIGAGLQPDNITFTGLLSGCSHSGLVDGG 375

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            LKYFN M  +Y +EPRVEHYACVVDLLGRAG L+EA +L+++MPMQ GPSIWGALL+ACR
Sbjct: 376  LKYFNCMKTIYSIEPRVEHYACVVDLLGRAGRLVEAIDLVSKMPMQAGPSIWGALLSACR 435

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
               NLEI EIAARKLF+LEP+NSGNYVLLSN+YAD G W+EVD+LRA+LK QGMKK+PGC
Sbjct: 436  KHHNLEIAEIAARKLFILEPDNSGNYVLLSNIYADAGMWKEVDDLRALLKSQGMKKNPGC 495

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIH-MLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQ 1079
            SW E+NGKAHLFLGGDT HPQAKEI+ +LLE LP KIK AGYVP+TSFVLHDVSEEEKE 
Sbjct: 496  SWIEVNGKAHLFLGGDTCHPQAKEIYEVLLEELPNKIKAAGYVPDTSFVLHDVSEEEKEH 555

Query: 1080 NLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFH 1259
            NLTTHSEKLAIAFGLLN   G +LRVTKNLRICGDCHTATK ISRIY+REI VRD+NRFH
Sbjct: 556  NLTTHSEKLAIAFGLLNASPGVVLRVTKNLRICGDCHTATKLISRIYEREIIVRDLNRFH 615

Query: 1260 HFKDGSCSCGDYW 1298
            HF+DG CSCGDYW
Sbjct: 616  HFRDGCCSCGDYW 628



 Score = 95.1 bits (235), Expect = 9e-17
 Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 7/283 (2%)
 Frame = +3

Query: 18  IQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVL 197
           + SA  +F +++  + + + ++I  Y+  G  ++ ++++ +M R    +K +  T   VL
Sbjct: 69  LDSAVNIFHRVNNPSTLLYNSIIRAYTLYGYSEKTMEIYGQMHRLG--LKGDNFTYPFVL 126

Query: 198 PACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERG 377
             C + +++  G+ +H+ + RIGL S   V T+LI MY KCG + DAR  F+ ++V  R 
Sbjct: 127 KCCANLSSIWLGKCVHSLSLRIGLASDMYVGTSLIDMYVKCGEMSDARSSFDKMTV--RD 184

Query: 378 LIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFN 557
           + +WN +I+ Y   G     +   ED+ R     + +S+T ++SG + +GL +  L  F+
Sbjct: 185 VSSWNALIAGYMKDGE----ICFAEDLFRRMPCKNIVSWTAMISGYTQNGLAEQALVLFD 240

Query: 558 GM-GKVYYVEPRVEHYACVVDLLGRAGYLMEAKELIN---RMPMQPGPSIWGALLAACRT 725
            M  K   V+P       V+     +  L   +++ N   R  +    SI  ALLA    
Sbjct: 241 EMLRKDSEVKPNWVTIMSVLPACAHSAALERGRQIHNFASRTGLDSNTSIQTALLAMYAK 300

Query: 726 QGNLEIGEIAARKLFVLEPENSGNYVLLSNM---YADVGRWQE 845
            G+L      AR+ F    +   + V  + M   YA  GR  E
Sbjct: 301 CGSLS----DARQCFERVHQTENSLVAWNTMITAYASHGRGSE 339


>ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Fragaria vesca subsp. vesca]
          Length = 631

 Score =  675 bits (1741), Expect = 0.0
 Identities = 322/424 (75%), Positives = 366/424 (86%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            M+ G I  AEELFG+M  +NI+SWTAMISGY+QNG+ ++AL +F+EM REDSEVKPNWVT
Sbjct: 138  MREGEICVAEELFGEMRCKNIVSWTAMISGYTQNGMAEQALGVFDEMLREDSEVKPNWVT 197

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            +MSVLP C HSAALE GR+IH +A  IGL   +S+ TAL+AMYAKCGSL +AR CF+ IS
Sbjct: 198  VMSVLPGCAHSAALERGRKIHEFARGIGLEKNASIQTALVAMYAKCGSLSEARQCFQRIS 257

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
             +E+ L+ WNTMI+AYASH  G EAVSTFEDM+RAGVQPD I+FTGLLSGCSHSGLVDVG
Sbjct: 258  GSEKSLVVWNTMITAYASHARGSEAVSTFEDMVRAGVQPDHITFTGLLSGCSHSGLVDVG 317

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            LKYF+GM  VY VEPRVEHYACVVDLLGRAG LMEA +++++MPMQ GPSIWGALL+ACR
Sbjct: 318  LKYFDGMKTVYSVEPRVEHYACVVDLLGRAGRLMEAMDVVHKMPMQAGPSIWGALLSACR 377

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
               NL+I E AAR LF+LEP+NSGNYVLLSN+YA+ G W+EVD LR +LK QGMKKSPGC
Sbjct: 378  NHSNLDIAETAARNLFILEPDNSGNYVLLSNIYAEAGMWKEVDKLRILLKSQGMKKSPGC 437

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SW E+NGKAHLFLGGDTSHPQAKE++MLLE LPKK+K AGYVP+T F LHDVSEEEKE N
Sbjct: 438  SWIEVNGKAHLFLGGDTSHPQAKEVYMLLEELPKKMKAAGYVPDTRFSLHDVSEEEKEHN 497

Query: 1083 LTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHH 1262
            LTTHSEKLAIAFGLLNT  G +LRVTKNLRICGDCHTATKFIS IY REI VRDVNRFHH
Sbjct: 498  LTTHSEKLAIAFGLLNTAPGVVLRVTKNLRICGDCHTATKFISMIYGREIIVRDVNRFHH 557

Query: 1263 FKDG 1274
            FKDG
Sbjct: 558  FKDG 561



 Score = 85.9 bits (211), Expect = 5e-14
 Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 37/273 (13%)
 Frame = +3

Query: 9   NGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIM 188
           +G + SA  +F  ++  + + + ++I  ++ +G + ++++++ +M      +K +  T  
Sbjct: 8   SGDLASAVNVFHSVNYPSTLLYNSIIRAHTLHGYIAKSIEIYGQMHCLG--LKGDHFTYP 65

Query: 189 SVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVN 368
            VL  C   + +  G+ +H  + R GL S   V T+LI MY KC  + +AR  F+ +SV 
Sbjct: 66  FVLKCCAELSDVRIGKCVHGLSLRTGLESDVYVGTSLIDMYVKCCEMSNARMVFDELSV- 124

Query: 369 ERGLIAWN-------------------------------TMISAYASHGHGMEAVSTFED 455
            RG+ +WN                                MIS Y  +G   +A+  F++
Sbjct: 125 -RGVSSWNAMIAGYMREGEICVAEELFGEMRCKNIVSWTAMISGYTQNGMAEQALGVFDE 183

Query: 456 MIR--AGVQPDFISFTGLLSGCSHSGLVDVGLK---YFNGMGKVYYVEPRVEHYACVVDL 620
           M+R  + V+P++++   +L GC+HS  ++ G K   +  G+G    +E        +V +
Sbjct: 184 MLREDSEVKPNWVTVMSVLPGCAHSAALERGRKIHEFARGIG----LEKNASIQTALVAM 239

Query: 621 LGRAGYLMEAKELINRMP-MQPGPSIWGALLAA 716
             + G L EA++   R+   +    +W  ++ A
Sbjct: 240 YAKCGSLSEARQCFQRISGSEKSLVVWNTMITA 272


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  670 bits (1728), Expect = 0.0
 Identities = 322/432 (74%), Positives = 372/432 (86%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            MK G I  AE+LF +M  RNI+SWTAMISGY+QNG  ++AL LF+EM ++ SE+KPNWVT
Sbjct: 258  MKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVT 317

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            I+SVLPAC  SAALE GRRIH++AN IGL   SSV TAL  MYAKC SLV+AR CF+ I+
Sbjct: 318  IVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIA 377

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
             N + LIAWNTMI+AYASHG G+EAVS FE+M+RAGVQPD ++F GLLSGCSHSGL+D G
Sbjct: 378  QNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 437

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            L +FN MG ++ VEPRVEHYACVVDLLGRAG L+EAKELI++MPMQ GPS+WGALLAACR
Sbjct: 438  LNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACR 497

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
            +  NLEI E+AAR+LFVLEP+NSGNYVLLSN+YA+ G W+EV  LRA+LK QGMKKSPGC
Sbjct: 498  SHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGC 557

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SW EINGK+HLF+G D SHPQAKEI+  LEALP+KIK AGY+P+TSFVLHD+SEEEKE N
Sbjct: 558  SWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYN 617

Query: 1083 LTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHH 1262
            LTTHSEKLAIAFGLLNT  G +LRVTKNLRICGDCH ATKFIS+IY+REI VRD+NRFH 
Sbjct: 618  LTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHC 677

Query: 1263 FKDGSCSCGDYW 1298
            FKDGSCSCGDYW
Sbjct: 678  FKDGSCSCGDYW 689



 Score = 72.8 bits (177), Expect = 5e-10
 Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
 Frame = +3

Query: 9   NGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDS-EVKPNWVTI 185
           +G + SA  +F ++   + + + ++I  Y+++G         E   R     +  +  T+
Sbjct: 125 SGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTL 184

Query: 186 MSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISV 365
             VL +C   + +  GR +H    R+GL     V  +LI MY KCG + DAR  F+ + V
Sbjct: 185 PFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIV 244

Query: 366 NE-----------------------------RGLIAWNTMISAYASHGHGMEAVSTFEDM 458
            +                             R +++W  MIS Y  +G   +A+  F++M
Sbjct: 245 RDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEM 304

Query: 459 IRAG--VQPDFISFTGLLSGCSHSGLVDVGLK---YFNGMG 566
           ++ G  ++P++++   +L  C+ S  ++ G +   + NG+G
Sbjct: 305 LQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 345


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  670 bits (1728), Expect = 0.0
 Identities = 322/432 (74%), Positives = 372/432 (86%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            MK G I  AE+LF +M  RNI+SWTAMISGY+QNG  ++AL LF+EM ++ SE+KPNWVT
Sbjct: 184  MKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVT 243

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            I+SVLPAC  SAALE GRRIH++AN IGL   SSV TAL  MYAKC SLV+AR CF+ I+
Sbjct: 244  IVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIA 303

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
             N + LIAWNTMI+AYASHG G+EAVS FE+M+RAGVQPD ++F GLLSGCSHSGL+D G
Sbjct: 304  QNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 363

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            L +FN MG ++ VEPRVEHYACVVDLLGRAG L+EAKELI++MPMQ GPS+WGALLAACR
Sbjct: 364  LNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACR 423

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
            +  NLEI E+AAR+LFVLEP+NSGNYVLLSN+YA+ G W+EV  LRA+LK QGMKKSPGC
Sbjct: 424  SHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGC 483

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SW EINGK+HLF+G D SHPQAKEI+  LEALP+KIK AGY+P+TSFVLHD+SEEEKE N
Sbjct: 484  SWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYN 543

Query: 1083 LTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHH 1262
            LTTHSEKLAIAFGLLNT  G +LRVTKNLRICGDCH ATKFIS+IY+REI VRD+NRFH 
Sbjct: 544  LTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHC 603

Query: 1263 FKDGSCSCGDYW 1298
            FKDGSCSCGDYW
Sbjct: 604  FKDGSCSCGDYW 615



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 34/163 (20%)
 Frame = +3

Query: 180 TIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESI 359
           T+  VL +C   + +  GR +H    R+GL     V  +LI MY KCG + DAR  F+ +
Sbjct: 109 TLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM 168

Query: 360 SVNE-----------------------------RGLIAWNTMISAYASHGHGMEAVSTFE 452
            V +                             R +++W  MIS Y  +G   +A+  F+
Sbjct: 169 IVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFD 228

Query: 453 DMIRAG--VQPDFISFTGLLSGCSHSGLVDVGLK---YFNGMG 566
           +M++ G  ++P++++   +L  C+ S  ++ G +   + NG+G
Sbjct: 229 EMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  657 bits (1695), Expect = 0.0
 Identities = 313/431 (72%), Positives = 360/431 (83%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTI 185
            K+G I +A  +F +M  RNI+SWT MISGYSQ+GL  +AL LF+EM +EDS V+PNWVTI
Sbjct: 212  KSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTI 271

Query: 186  MSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISV 365
            MSVLPAC   + LE GR+IH  A R+GL S +SVL AL AMYAKCGSLVDAR+CF+ ++ 
Sbjct: 272  MSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNR 331

Query: 366  NERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGL 545
            NE+ LIAWNTMI+AYAS+GHG++AVSTF +MI+AG+QPD I+FTGLLSGCSHSGLVDVGL
Sbjct: 332  NEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL 391

Query: 546  KYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACRT 725
            KYFN M   Y + PRVEHYACV DLLGRAG L EA +L+  MPM  GPSIWG+LLAACR 
Sbjct: 392  KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 451

Query: 726  QGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGCS 905
              NLE+ E AARKLFVLEPEN+GNYVLLSNMYA+ GRWQEVD LRAI+K QG KKSPGCS
Sbjct: 452  HRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 511

Query: 906  WTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQNL 1085
            W EINGKAH+FLGGDTSHPQ KEI+M LEALP+K+K AGY P+TS+VLHD+SEEEKE NL
Sbjct: 512  WIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNL 571

Query: 1086 TTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHHF 1265
              HSEKLA+AFG+LNT   T+LRVTKNLRICGDCHTA  FIS IY RE+ VRD+NRFHHF
Sbjct: 572  IAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHF 631

Query: 1266 KDGSCSCGDYW 1298
            K G CSCGDYW
Sbjct: 632  KGGCCSCGDYW 642



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
 Frame = +3

Query: 81  MISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHGRRIHNYANR 260
           M++ Y+ +G +D ++ +F  +         ++ T   VL +     ++  G+ +H    R
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIG--------DYFTFPFVLKSSVELLSVWMGKCVHGLILR 162

Query: 261 IGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAYASHGHGMEAV 440
           IGL     V T+LI +Y KCG + DA   F+++++  R + +WN +++ Y   G    A+
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI--RDVSSWNALLAGYTKSGCIDAAL 220

Query: 441 STFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGMGKV-YYVEPRVEHYACVVD 617
           + FE M    +    +S+T ++SG S SGL    L  F+ M K    V P       V+ 
Sbjct: 221 AIFERMPWRNI----VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLP 276

Query: 618 LLGRAGYLMEAK---ELINRMPMQPGPSIWGALLAACRTQGNLEIGEIAARKLFVLEPEN 788
              +   L   +   EL  RM +    S+  AL A     G+L    + AR  F     N
Sbjct: 277 ACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL----VDARNCFDKLNRN 332

Query: 789 SGNYVLLSNM---YADVGR-WQEVDNLRAILK 872
             N +  + M   YA  G   Q V   R +++
Sbjct: 333 EKNLIAWNTMITAYASYGHGLQAVSTFREMIQ 364


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Cucumis sativus]
          Length = 679

 Score =  657 bits (1695), Expect = 0.0
 Identities = 313/431 (72%), Positives = 360/431 (83%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTI 185
            K+G I +A  +F +M  RNI+SWT MISGYSQ+GL  +AL LF+EM +EDS V+PNWVTI
Sbjct: 249  KSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTI 308

Query: 186  MSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISV 365
            MSVLPAC   + LE GR+IH  A R+GL S +SVL AL AMYAKCGSLVDAR+CF+ ++ 
Sbjct: 309  MSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNR 368

Query: 366  NERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGL 545
            NE+ LIAWNTMI+AYAS+GHG++AVSTF +MI+AG+QPD I+FTGLLSGCSHSGLVDVGL
Sbjct: 369  NEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL 428

Query: 546  KYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACRT 725
            KYFN M   Y + PRVEHYACV DLLGRAG L EA +L+  MPM  GPSIWG+LLAACR 
Sbjct: 429  KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 488

Query: 726  QGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGCS 905
              NLE+ E AARKLFVLEPEN+GNYVLLSNMYA+ GRWQEVD LRAI+K QG KKSPGCS
Sbjct: 489  HRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 548

Query: 906  WTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQNL 1085
            W EINGKAH+FLGGDTSHPQ KEI+M LEALP+K+K AGY P+TS+VLHD+SEEEKE NL
Sbjct: 549  WIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNL 608

Query: 1086 TTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHHF 1265
              HSEKLA+AFG+LNT   T+LRVTKNLRICGDCHTA  FIS IY RE+ VRD+NRFHHF
Sbjct: 609  IAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHF 668

Query: 1266 KDGSCSCGDYW 1298
            K G CSCGDYW
Sbjct: 669  KGGCCSCGDYW 679



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 8/296 (2%)
 Frame = +3

Query: 9   NGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIM 188
           +G I S+  +F  + + + + + +MI  Y++ G  +R +  +  M         ++ T  
Sbjct: 118 SGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWG--FTGDYFTFP 175

Query: 189 SVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVN 368
            VL +     ++  G+ +H    RIGL     V T+LI +Y KCG + DA   F+++++ 
Sbjct: 176 FVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI- 234

Query: 369 ERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLK 548
            R + +WN +++ Y   G    A++ FE M    +    +S+T ++SG S SGL    L 
Sbjct: 235 -RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQQALS 289

Query: 549 YFNGMGKV-YYVEPRVEHYACVVDLLGRAGYLMEAK---ELINRMPMQPGPSIWGALLAA 716
            F+ M K    V P       V+    +   L   +   EL  RM +    S+  AL A 
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349

Query: 717 CRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNM---YADVGR-WQEVDNLRAILK 872
               G+L    + AR  F     N  N +  + M   YA  G   Q V   R +++
Sbjct: 350 YAKCGSL----VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQ 401


>gb|EYU26534.1| hypothetical protein MIMGU_mgv1a024701mg, partial [Mimulus guttatus]
          Length = 518

 Score =  655 bits (1689), Expect = 0.0
 Identities = 311/432 (71%), Positives = 363/432 (84%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            M++G  + A ELF KM  +NI+SWT+MISGY+QNGL D AL LF+EM R+DSE+KPNWVT
Sbjct: 87   MRDGTFELARELFDKMPVKNIVSWTSMISGYTQNGLADNALQLFDEMSRQDSEMKPNWVT 146

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            IMSVLPAC HS+ALE G++IHN+A   GL S  SV TAL+ MYAKCGSL DAR CF+ I 
Sbjct: 147  IMSVLPACAHSSALERGKKIHNFAQEKGLDSHPSVQTALVGMYAKCGSLADARWCFDRIK 206

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
             N + L++WN+MI+AYASHG GMEAV TFEDMI +GV PD ISFTGLLSGCSHSGLVD+G
Sbjct: 207  PNSKNLVSWNSMITAYASHGLGMEAVQTFEDMIESGVGPDGISFTGLLSGCSHSGLVDIG 266

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            L+YF+ M  VY VE + EHYACVVDLLGRAG L+EA ELI+RMPMQ GPS+WG+LLAA R
Sbjct: 267  LRYFDSMSSVYLVEKKHEHYACVVDLLGRAGRLVEAYELISRMPMQAGPSVWGSLLAAGR 326

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
               NLEI E+AA+KLFVLEPENSGNYV+LSNMYA+ G W+EVD+LR +LK + +KK+PGC
Sbjct: 327  CHRNLEIAELAAKKLFVLEPENSGNYVILSNMYAEAGMWEEVDSLRGVLKSKCVKKNPGC 386

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SW E+NGKAHLFLGGD SH Q +EI+  LE LP+K+K AGYVP+T F LHD+SEEEKE +
Sbjct: 387  SWIEMNGKAHLFLGGDASHAQTREIYSFLEELPEKMKAAGYVPDTRFALHDISEEEKEFS 446

Query: 1083 LTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHH 1262
            LTTHSEKLAIAFGLLN+  G +LRVTKNLRICGDCHTA KFIS+IYDREI VRDVNRFH 
Sbjct: 447  LTTHSEKLAIAFGLLNSKGGEVLRVTKNLRICGDCHTAIKFISKIYDREIVVRDVNRFHR 506

Query: 1263 FKDGSCSCGDYW 1298
            FK+GSCSCGDYW
Sbjct: 507  FKEGSCSCGDYW 518


>gb|EXB37797.1| hypothetical protein L484_002732 [Morus notabilis]
          Length = 672

 Score =  648 bits (1671), Expect = 0.0
 Identities = 311/432 (71%), Positives = 367/432 (84%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            MK G I+ AE+LFG+M +RNI+SWTAMISGY+QNGL  +AL LF++M  +DS +KP WVT
Sbjct: 241  MKIGEIRLAEDLFGRMVRRNIVSWTAMISGYAQNGLAGQALVLFDKMLEDDSGIKPTWVT 300

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            IMSVLPAC HSAALE GR IH  A+RIGL S  SV +ALIAMYA+CGSL +A  CF+ I 
Sbjct: 301  IMSVLPACAHSAALERGREIHKLASRIGLDSDVSVQSALIAMYARCGSLAEACQCFDRIH 360

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
             +++ L+ WNTMISAYASHG G+E+VSTFEDMIRA +QPD ISFTGLLSGCSHSGLVD+G
Sbjct: 361  QHKKDLVVWNTMISAYASHGRGLESVSTFEDMIRARIQPDIISFTGLLSGCSHSGLVDLG 420

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            +KYFN M  +Y VEP V+H ACVVDLLGRAG L+EAKELI++MPMQ G S WGALLAACR
Sbjct: 421  IKYFNRMKTMYNVEPEVQHCACVVDLLGRAGRLVEAKELIDKMPMQAGASAWGALLAACR 480

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
               NLE+ E+AA+KLFVLEP +S NYV LSNMYA+ G W+EV NLR +LK +G++K+PGC
Sbjct: 481  KHRNLELAEVAAKKLFVLEPYSSANYVHLSNMYAEAGMWKEVANLRDLLKYRGIRKTPGC 540

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SW E+NGKAH+FLGGDTSHPQ +EI+M LE+LP+K+K+AGYVP+TS VLHD+SEEEKE N
Sbjct: 541  SWIEVNGKAHMFLGGDTSHPQTREIYMFLESLPEKMKQAGYVPDTSPVLHDLSEEEKEHN 600

Query: 1083 LTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHH 1262
            LT+HSEKLAIAFGLLNT   TI+RVTKNLRIC DCHTATKFIS+I+ REI VRD+NRFHH
Sbjct: 601  LTSHSEKLAIAFGLLNTSPSTIIRVTKNLRICVDCHTATKFISKIFRREIIVRDLNRFHH 660

Query: 1263 FKDGSCSCGDYW 1298
            F DGSCSCGDYW
Sbjct: 661  FTDGSCSCGDYW 672



 Score = 81.6 bits (200), Expect = 1e-12
 Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 32/272 (11%)
 Frame = +3

Query: 12  GVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMS 191
           G ++SA  +F ++   + +   ++I  YS +    + + ++  M+     +K +  T   
Sbjct: 112 GDLRSAVAVFRRIKYPSALLCNSIIRAYSWHWFPKKTIGVYFRMR--SLGLKADHFTYPF 169

Query: 192 VLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNE 371
           VL +C   + +  GR  H  + R G      V T+LI MY KCG + DAR  F+ ++V +
Sbjct: 170 VLKSCADLSDVRMGRYAHGLSLRTGFEEDFYVGTSLINMYVKCGGIGDARKMFDVMTVRD 229

Query: 372 -----------------------------RGLIAWNTMISAYASHGHGMEAVSTFEDMIR 464
                                        R +++W  MIS YA +G   +A+  F+ M+ 
Sbjct: 230 ISSWNALIAGYMKIGEIRLAEDLFGRMVRRNIVSWTAMISGYAQNGLAGQALVLFDKMLE 289

Query: 465 --AGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGY 638
             +G++P +++   +L  C+HS  ++ G +  + +     ++  V   + ++ +  R G 
Sbjct: 290 DDSGIKPTWVTIMSVLPACAHSAALERG-REIHKLASRIGLDSDVSVQSALIAMYARCGS 348

Query: 639 LMEAKELINRMPM-QPGPSIWGALLAACRTQG 731
           L EA +  +R+   +    +W  +++A  + G
Sbjct: 349 LAEACQCFDRIHQHKKDLVVWNTMISAYASHG 380


>ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Solanum lycopersicum]
          Length = 625

 Score =  647 bits (1670), Expect = 0.0
 Identities = 307/432 (71%), Positives = 367/432 (84%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            MK+G+ + AEELF +M  RNI+SWTAMISGY+QNGL D +L LF++M   DSEV+PNWVT
Sbjct: 194  MKDGLFKDAEELFEEMPIRNIVSWTAMISGYAQNGLADESLQLFDKMLDPDSEVRPNWVT 253

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            +MSVLPAC HSAAL+ G++IH++A   GL    SV TALIAMYAKCGSLVDAR CF+ I+
Sbjct: 254  VMSVLPACAHSAALDRGKKIHSFAREAGLEKNPSVQTALIAMYAKCGSLVDARLCFDQIN 313

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
              E+ L+AWNTMI+AYASHG G EAVSTFEDM+RAG+QPD I+FTGLLSGCSHSGLVDVG
Sbjct: 314  PREKKLVAWNTMITAYASHGFGREAVSTFEDMLRAGIQPDKITFTGLLSGCSHSGLVDVG 373

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            L+YF+ M  VY+VE   +HYACVVDLLGRAG L+EA  LI++MPM  GPSIWG+LLAA R
Sbjct: 374  LRYFDCMSLVYFVEKGHDHYACVVDLLGRAGRLVEAYNLISQMPMAAGPSIWGSLLAAGR 433

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
            +  NLEI E+AA+KLF+LEP+NSGNY++LSNMYA+ G W+EV +LR   K + + KSPGC
Sbjct: 434  SHRNLEIAELAAKKLFILEPDNSGNYIVLSNMYAEAGMWEEVTHLRIQQKSRRIMKSPGC 493

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SW E +GKAHLFLGGDTSHPQA++I++ LEALP KIK AGY+P+T+F LHDVSEEEKEQN
Sbjct: 494  SWIEFDGKAHLFLGGDTSHPQAEQIYLFLEALPAKIKAAGYMPDTTFALHDVSEEEKEQN 553

Query: 1083 LTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHH 1262
            L++HSE+LAIAFG+LNT  GT+LRVTKNLRICGDCHTA K +S+IY+REI VRDVNRFHH
Sbjct: 554  LSSHSERLAIAFGILNTSPGTVLRVTKNLRICGDCHTAIKLVSKIYEREIIVRDVNRFHH 613

Query: 1263 FKDGSCSCGDYW 1298
            FKDGSCSC DYW
Sbjct: 614  FKDGSCSCRDYW 625



 Score = 85.5 bits (210), Expect = 7e-14
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
 Frame = +3

Query: 9   NGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIM 188
           +G I SA  +F   ++ + + + AMI   +  G+  R +++F +M       + +  T  
Sbjct: 64  SGEIDSASYIFDSATEPSSLLYNAMIRALTLYGITKRTIEIFFQMH--SLGFRGDNFTFP 121

Query: 189 SVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVN 368
            V  +C   + +  G+ +H+   R G      V T+L+ MY KCG L+DAR  F+ + V 
Sbjct: 122 FVFKSCADLSDVWCGKCVHSLILRSGFVFDMYVGTSLVDMYVKCGDLIDARKLFDEMPV- 180

Query: 369 ERGLIAWNTMISAYASHGHGMEAVSTFEDM-IRAGVQPDFISFTGLLSGCSHSGLVDVGL 545
            R + AWN +I+ Y   G   +A   FE+M IR     + +S+T ++SG + +GL D  L
Sbjct: 181 -RDVSAWNVLIAGYMKDGLFKDAEELFEEMPIR-----NIVSWTAMISGYAQNGLADESL 234

Query: 546 KYFNGM-GKVYYVEPRVEHYACVVDLLGRAGYLMEAKEL---INRMPMQPGPSIWGALLA 713
           + F+ M      V P       V+     +  L   K++        ++  PS+  AL+A
Sbjct: 235 QLFDKMLDPDSEVRPNWVTVMSVLPACAHSAALDRGKKIHSFAREAGLEKNPSVQTALIA 294

Query: 714 ACRTQGNL 737
                G+L
Sbjct: 295 MYAKCGSL 302


>ref|XP_007042234.1| Mitochondrial editing factor 21 [Theobroma cacao]
            gi|508706169|gb|EOX98065.1| Mitochondrial editing factor
            21 [Theobroma cacao]
          Length = 613

 Score =  549 bits (1414), Expect = e-153
 Identities = 270/372 (72%), Positives = 308/372 (82%)
 Frame = +3

Query: 3    MKNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVT 182
            MK G I  AE LFG+M +RNI+SWT MISGY+QNGL   AL LF+EM +E+SEVKPNWVT
Sbjct: 242  MKEGEIGVAEGLFGRMPRRNIVSWTVMISGYTQNGLAKEALSLFDEMMKEESEVKPNWVT 301

Query: 183  IMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESIS 362
            IMSVLPAC +SAALE GRRI+ Y NRIGL S  SV  ALIAMYA CGSLVDAR CF  I 
Sbjct: 302  IMSVLPACAYSAALERGRRINEYVNRIGLESNPSVQNALIAMYAACGSLVDARCCFNRIR 361

Query: 363  VNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVG 542
             NE+ L AWN MISAYASHG G+E VSTF++MIRAGV PD I+FTGLLSGCSHSGL++ G
Sbjct: 362  ENEKNLCAWNAMISAYASHGRGVECVSTFDNMIRAGVHPDAITFTGLLSGCSHSGLIEFG 421

Query: 543  LKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACR 722
            LKYFN M  VY VEPR+EHYACVVDLLGRAG L+EA E IN++PM+PGPSIWGALLAAC+
Sbjct: 422  LKYFNSMQTVYSVEPRLEHYACVVDLLGRAGRLVEAMEFINKIPMKPGPSIWGALLAACQ 481

Query: 723  TQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGC 902
               NLEI E+AA++LFVLEPENSGNYV+LSN+YA+ G W+E D LRA LK QG+KK+PGC
Sbjct: 482  KSKNLEIAEMAAKELFVLEPENSGNYVMLSNLYAEAGMWKEADKLRAHLKCQGIKKNPGC 541

Query: 903  SWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQN 1082
            SWTEINGKAH FLGGDTSHPQAKEI+ LLEAL +KIK AG VPNTSFVL D+SEEEK+ N
Sbjct: 542  SWTEINGKAHFFLGGDTSHPQAKEIYNLLEALLEKIKAAGCVPNTSFVLPDISEEEKQHN 601

Query: 1083 LTTHSEKLAIAF 1118
            LT  S +L + +
Sbjct: 602  LTVKSWQLVLDY 613



 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 10/288 (3%)
 Frame = +3

Query: 12  GVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMS 191
           G ++SA  +F ++     + + ++I  Y+  G   + +D++ +M      +K +  T   
Sbjct: 113 GDLESAVTIFNEIESPTSLLYNSIIRAYTNCGYPLKTVDIYCKMHYLG--LKGDNFTFPF 170

Query: 192 VLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNE 371
           VL +C +      G+ +H  + R G+     V T+LI  Y K G L DA+  F+ +++  
Sbjct: 171 VLKSCANVLNGWMGKCVHGQSLRFGMELDIYVGTSLIDFYVKIGELRDAKKVFDIMTL-- 228

Query: 372 RGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKY 551
           R + +WN +I+ Y   G    A   F  M R  +    +S+T ++SG + +GL    L  
Sbjct: 229 RAVSSWNALIAGYMKEGEIGVAEGLFGRMPRRNI----VSWTVMISGYTQNGLAKEALSL 284

Query: 552 FNGMGKVYYVEPRVE-HYACVVDLLGRAGYL------MEAKELINRMPMQPGPSIWGALL 710
           F+ M K    E  V+ ++  ++ +L    Y           E +NR+ ++  PS+  AL+
Sbjct: 285 FDEMMK---EESEVKPNWVTIMSVLPACAYSAALERGRRINEYVNRIGLESNPSVQNALI 341

Query: 711 AACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNM---YADVGRWQE 845
           A     G+L    + AR  F    EN  N    + M   YA  GR  E
Sbjct: 342 AMYAACGSL----VDARCCFNRIRENEKNLCAWNAMISAYASHGRGVE 385


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  465 bits (1196), Expect = e-128
 Identities = 224/431 (51%), Positives = 307/431 (71%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTI 185
            K G + SA +LF +M K+N+++W A+ISGYSQ+G    AL LF EMQ +   +KP+   I
Sbjct: 369  KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQG--IKPDSFAI 426

Query: 186  MSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISV 365
            +SVLPAC H  ALE G++IH Y  R G  S   V T L+ +YAKCG++  A+  FE +  
Sbjct: 427  VSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP- 485

Query: 366  NERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGL 545
             E+ +++W TMI AY  HGHG +A++ F  M   G + D I+FT +L+ CSH+GLVD GL
Sbjct: 486  -EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGL 544

Query: 546  KYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACRT 725
            +YF  M   Y + P++EHYAC+VDLLGRAG+L EA  +I  M ++P  ++WGALL ACR 
Sbjct: 545  QYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRI 604

Query: 726  QGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKSPGCS 905
              N+E+GE AA+ LF L+P+N+G YVLLSN+YA+  RW++V  LR ++K++G+KK PGCS
Sbjct: 605  HCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCS 664

Query: 906  WTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEKEQNL 1085
               ++     FL GD +HPQ+++I+ +LE L +++++AGYVPNT+  L DV EE KE  L
Sbjct: 665  VVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENIL 724

Query: 1086 TTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNRFHHF 1265
            ++HSEKLAI+FG++NT  G  +R+ KNLR+C DCH ATKFIS+I  REI VRD NRFHH 
Sbjct: 725  SSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHV 784

Query: 1266 KDGSCSCGDYW 1298
            K+G CSCGDYW
Sbjct: 785  KNGFCSCGDYW 795



 Score =  153 bits (386), Expect = 3e-34
 Identities = 92/245 (37%), Positives = 135/245 (55%)
 Frame = +3

Query: 6   KNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTI 185
           K G + +A +LF +M  R++ SW A+I GYS N     AL  F  MQ     +KPN +T+
Sbjct: 268 KCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG--IKPNSITM 325

Query: 186 MSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISV 365
           +SVLPAC H  ALE G++IH YA R G  S   V  AL+ MYAKCG++  A   FE +  
Sbjct: 326 VSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP- 384

Query: 366 NERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGL 545
            ++ ++AWN +IS Y+ HGH  EA++ F +M   G++PD  +   +L  C+H   ++ G 
Sbjct: 385 -KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQG- 442

Query: 546 KYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACRT 725
           K  +G       E  V     +VD+  + G +  A++L  RMP Q   S W  ++ A   
Sbjct: 443 KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS-WTTMILAYGI 501

Query: 726 QGNLE 740
            G+ E
Sbjct: 502 HGHGE 506



 Score =  143 bits (360), Expect = 3e-31
 Identities = 83/243 (34%), Positives = 135/243 (55%)
 Frame = +3

Query: 6   KNGVIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTI 185
           K G +++A ++F +M KR+++SW A+I+GYSQNG    AL LF EMQ     +KPN  T+
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNG--IKPNSSTL 224

Query: 186 MSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISV 365
           +SV+P C H  ALE G++IH YA R G+ S   V+  L+ MYAKCG++  A   FE + +
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPI 284

Query: 366 NERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGL 545
             R + +WN +I  Y+ +    EA++ F  M   G++P+ I+   +L  C+H   ++ G 
Sbjct: 285 --RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQG- 341

Query: 546 KYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLAACRT 725
           +  +G       E        +V++  + G +  A +L  RMP +     W A+++    
Sbjct: 342 QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQ 400

Query: 726 QGN 734
            G+
Sbjct: 401 HGH 403



 Score =  108 bits (271), Expect = 6e-21
 Identities = 66/223 (29%), Positives = 119/223 (53%), Gaps = 4/223 (1%)
 Frame = +3

Query: 54  KRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHG 233
           + N + W   I GY +NG  ++AL L+ +MQR  + + P+ +  +SV+ AC   + L+ G
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQR--TGINPDKLVFLSVIKACGSQSDLQAG 139

Query: 234 RRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAYA 413
           R++H      G  S   V TAL +MY KCGSL +AR  F+ +   +R +++WN +I+ Y+
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMP--KRDVVSWNAIIAGYS 197

Query: 414 SHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGMGKVYYVEPRV 593
            +G   EA++ F +M   G++P+  +   ++  C+H   ++ G +        Y +   +
Sbjct: 198 QNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI-----HCYAIRSGI 252

Query: 594 EHYACV----VDLLGRAGYLMEAKELINRMPMQPGPSIWGALL 710
           E    V    V++  + G +  A +L  RMP++   S W A++
Sbjct: 253 ESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVAS-WNAII 294


>gb|EYU24286.1| hypothetical protein MIMGU_mgv1a025107mg [Mimulus guttatus]
          Length = 654

 Score =  463 bits (1192), Expect = e-128
 Identities = 231/435 (53%), Positives = 301/435 (69%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSA----EELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            ++G++  A    +EL G+  + N++SWT++I+  SQ+G    AL+LF EMQ   + VKPN
Sbjct: 224  RHGLVDKALRVFKELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQ--SAGVKPN 281

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI  +LPAC + AAL HG+  H ++ R G+     V +ALI MYA CG +  AR CF+
Sbjct: 282  AVTIPCLLPACGNIAALMHGKAAHCFSLRRGISGDVYVGSALIDMYANCGKIQLARCCFD 341

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             + V  R L+ WN M+  YA HG   EA+  F  M R+G +PD +S T LLS CS SGL 
Sbjct: 342  RMPV--RNLVCWNAMLGGYAMHGKANEAIEFFLLMQRSGQKPDSVSLTSLLSACSQSGLT 399

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            + G +YF+ M   + ++PRVEHYACVV LLGRAG L EA  +I +MP +P   +WGALL+
Sbjct: 400  EEGHRYFDRMTTDHGIKPRVEHYACVVSLLGRAGKLEEAYSMIEKMPFEPDACVWGALLS 459

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR   N+ +GE+AARKLF LEP N GNY+L+SN+YA  GR++EVD +R I++D+G++K+
Sbjct: 460  SCRVHHNMSLGEVAARKLFELEPMNPGNYILMSNIYASKGRYKEVDKIRDIMRDKGLRKN 519

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW E+  K H+ L GD S PQ  +I   L  L  ++K+AGY PNT +VL DV E+EK
Sbjct: 520  PGCSWIEVKNKVHMLLAGDKSLPQMAQIMDKLNRLSIEMKKAGYSPNTDYVLQDVEEQEK 579

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            E  L  HSEKLA+ FG+LNT  G+ LRVTKNLRICGDCH   KFISR   REIFVRD NR
Sbjct: 580  EHILCGHSEKLAVVFGILNTSPGSPLRVTKNLRICGDCHAVIKFISRFERREIFVRDTNR 639

Query: 1254 FHHFKDGSCSCGDYW 1298
            +HHFKDG CSCGDYW
Sbjct: 640  YHHFKDGDCSCGDYW 654



 Score = 88.6 bits (218), Expect = 8e-15
 Identities = 57/198 (28%), Positives = 97/198 (48%)
 Frame = +3

Query: 60  NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHGRR 239
           N +SW  MI+G++Q+G    A+ +F++M +     K +  +I SVLPA      L  G +
Sbjct: 110 NTVSWNGMIAGFNQSGCFLDAVLMFQQMHKHG--FKSDGTSISSVLPAIGDLGYLSTGTQ 167

Query: 240 IHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAYASH 419
           +H Y  + G      +++ALI MY KCG  ++     E +   E G  A N +I+  A H
Sbjct: 168 VHGYVIKNGFAVDKCIVSALIDMYGKCGCALEMSQVLEDMGQVEVG--ACNALITGLARH 225

Query: 420 GHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGMGKVYYVEPRVEH 599
           G   +A+  F+++    ++ + +S+T +++ CS  G     L+ F  M     V+P    
Sbjct: 226 GLVDKALRVFKELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQSA-GVKPNAVT 284

Query: 600 YACVVDLLGRAGYLMEAK 653
             C++   G    LM  K
Sbjct: 285 IPCLLPACGNIAALMHGK 302



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 44/158 (27%), Positives = 81/158 (51%)
 Frame = +3

Query: 168 PNWVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHC 347
           P+   + SV+ AC    A+  G+++H ++   G+   S V ++L+  Y KC  LVDA   
Sbjct: 8   PDAHVLPSVIKACAGLLAVNIGKQVHGFSLASGISLDSFVQSSLVHFYVKCDELVDAHKL 67

Query: 348 FESISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSG 527
           F+++   ER +++W+ + + YA  G  + A   F ++   G QP+ +S+ G+++G + SG
Sbjct: 68  FDNMV--ERDVVSWSALAAGYARKGDRVNARKVFNEVKNLGFQPNTVSWNGMIAGFNQSG 125

Query: 528 LVDVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYL 641
                +  F  M K  +        + V+  +G  GYL
Sbjct: 126 CFLDAVLMFQQMHKHGFKSDGTS-ISSVLPAIGDLGYL 162


>gb|EYU18955.1| hypothetical protein MIMGU_mgv1a022111mg [Mimulus guttatus]
          Length = 654

 Score =  462 bits (1189), Expect = e-127
 Identities = 232/435 (53%), Positives = 300/435 (68%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSA----EELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            ++G++  A    +EL G+  + N++SWT++I+  SQ+G    AL+LF EMQ   S VKPN
Sbjct: 224  RHGLVDKALGVFKELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQA--SGVKPN 281

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI  +LPAC + AAL HG+  H ++ R G+     V +ALI MYA CG +  AR CF+
Sbjct: 282  AVTIPCLLPACGNIAALMHGKAAHCFSLRRGISGDVYVGSALIDMYANCGKIQLARCCFD 341

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             +SV  R L+ WN M+  YA HG   EA+  F  M R+G +PD +S T LLS CS SGL 
Sbjct: 342  RMSV--RNLVCWNAMLGGYAMHGKAKEAIEFFLLMQRSGQKPDSVSLTSLLSACSQSGLT 399

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            + G +YF+ M   + ++PRVEHYACVV LLGRAG L EA  +I +MP +P   +WGALL+
Sbjct: 400  EEGHRYFDRMTTDHGIKPRVEHYACVVSLLGRAGKLEEAYSMIEKMPFEPDACVWGALLS 459

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR   N+ +G +AARKLF LEP+N GNY+LLSN+YA  GR++EVD +R I+ D+G++K+
Sbjct: 460  SCRVHHNMSLGGVAARKLFELEPKNPGNYILLSNIYASKGRYKEVDKIRDIMGDKGLRKN 519

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW E+  K H+ L GD S PQ  +I   L  L  ++K+AGY PNT +VL DV E+EK
Sbjct: 520  PGCSWIEVKNKVHMLLAGDKSLPQMAQIMEKLNRLSIEMKKAGYSPNTDYVLQDVEEQEK 579

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            E  L  HSEKLA+ FG+LN   G+ LRVTKNLRICGDCH   KFISR   REIFVRD NR
Sbjct: 580  EHILCGHSEKLAVVFGILNMSPGSPLRVTKNLRICGDCHAVIKFISRFERREIFVRDTNR 639

Query: 1254 FHHFKDGSCSCGDYW 1298
            +HHFKDG CSCGDYW
Sbjct: 640  YHHFKDGDCSCGDYW 654



 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 4/220 (1%)
 Frame = +3

Query: 6   KNGVIQSAEELFGKMS----KRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
           + G   +A ++F ++     + N +SW  MI+G++++G    A+ +F++M +     K +
Sbjct: 88  RKGDAVNARKVFNEVKNLGFQPNTVSWNGMIAGFNRSGCFLDAVLMFQQMHKHG--FKSD 145

Query: 174 WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             +I SVLPA      L  G ++H Y  + G      +++ALI MY KCG  ++     E
Sbjct: 146 GTSISSVLPAIGDLGYLSSGTQVHGYVIKNGFAVDKCIVSALIDMYGKCGYALEMSQVLE 205

Query: 354 SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
            +   E G  A N +I+  A HG   +A+  F+++    ++ + +S+T +++ CS  G  
Sbjct: 206 DMGQVEVG--ACNALITGLARHGLVDKALGVFKELQGQQMELNVVSWTSVIACCSQHGKD 263

Query: 534 DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAK 653
              L+ F  M +   V+P      C++   G    LM  K
Sbjct: 264 IEALELFREM-QASGVKPNAVTIPCLLPACGNIAALMHGK 302



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 44/164 (26%), Positives = 84/164 (51%)
 Frame = +3

Query: 168 PNWVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHC 347
           P+   + SV+ AC    A++ G+++H ++   G+   S V ++L+  Y KC  LVDA   
Sbjct: 8   PDAHVLPSVIKACAGLLAVKIGKQVHGFSLASGISLDSFVQSSLVHFYVKCDELVDAHKL 67

Query: 348 FESISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSG 527
           F+++   ER +++W+ + + YA  G  + A   F ++   G QP+ +S+ G+++G + SG
Sbjct: 68  FDNMV--ERDVVSWSALAAGYARKGDAVNARKVFNEVKNLGFQPNTVSWNGMIAGFNRSG 125

Query: 528 LVDVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKEL 659
                +  F  M K  +        + V+  +G  GYL    ++
Sbjct: 126 CFLDAVLMFQQMHKHGFKSDGTS-ISSVLPAIGDLGYLSSGTQV 168


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
            [Vitis vinifera]
          Length = 758

 Score =  459 bits (1181), Expect = e-126
 Identities = 228/435 (52%), Positives = 298/435 (68%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKR----NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            +NG ++S+  LF ++  +    N++SWT+MI+  SQNG    AL+LF EMQ   + VKPN
Sbjct: 328  RNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI--AGVKPN 385

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI  +LPAC + AAL HG+  H ++ R G+ +   V +ALI MYAKCG +  +R CF+
Sbjct: 386  SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             I    + L+ WN +I+ YA HG   EA+  F+ M R+G +PD ISFT +LS CS SGL 
Sbjct: 446  GIPT--KNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            + G  YFN M   Y +E RVEHYAC+V LL RAG L +A  +I RMP+ P   +WGALL+
Sbjct: 504  EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR   N+ +GE+AA KLF LEP N GNY+LLSN+YA  G W EV+ +R ++K++G++K+
Sbjct: 564  SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW E+  K H+ L GD SHPQ  +I   L+ L  ++K+ GY P  +FVL DV E++K
Sbjct: 624  PGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDK 683

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            EQ L  HSEKLA+ FGLLNT  G  L+V KNLRICGDCH   KFIS    REIFVRD NR
Sbjct: 684  EQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNR 743

Query: 1254 FHHFKDGSCSCGDYW 1298
            FHHFK+G+CSCGDYW
Sbjct: 744  FHHFKEGACSCGDYW 758



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 53/168 (31%), Positives = 91/168 (54%)
 Frame = +3

Query: 60  NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHGRR 239
           N+ S++ +I  +S+      AL  F +M      + P+   + S + AC   +AL+  R+
Sbjct: 78  NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRG--LMPDNRVLPSAVKACAGLSALKPARQ 135

Query: 240 IHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAYASH 419
           +H  A+  G  S S V ++L+ MY KC  + DA   F+ +   E  +++W+ +++AYA  
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMF--EPDVVSWSALVAAYARQ 193

Query: 420 GHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGM 563
           G   EA   F +M  +GVQP+ IS+ G+++G +HSGL    +  F  M
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
 Frame = +3

Query: 6   KNGVIQSAEELFGKMS----KRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
           + G +  A+ LF +M     + N+ISW  MI+G++ +GL   A+ +F +M     E  P+
Sbjct: 192 RQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE--PD 249

Query: 174 WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             TI SVLPA      L  G  IH Y  + GL S   V +ALI MY KC    +    F+
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309

Query: 354 SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
            +   + G  + N  I   + +G    ++  F  +   G++ + +S+T +++ CS +G  
Sbjct: 310 QMDHMDVG--SCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367

Query: 534 DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAK 653
              L+ F  M ++  V+P      C++   G    LM  K
Sbjct: 368 IEALELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGK 406


>ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutrema salsugineum]
            gi|557094189|gb|ESQ34771.1| hypothetical protein
            EUTSA_v10009574mg [Eutrema salsugineum]
          Length = 760

 Score =  459 bits (1180), Expect = e-126
 Identities = 228/435 (52%), Positives = 301/435 (69%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKRNI----ISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            +NG+I  A E+F    ++NI    +SWT++I+G +QNG    AL+LF EMQ   + VKPN
Sbjct: 330  RNGLIDKALEMFELFKEQNIELNVVSWTSIIAGCAQNGKDIEALELFREMQV--ARVKPN 387

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI S+LPAC + AAL HGR  H +A R+ L     V +ALI MYAKCG +  ++  F+
Sbjct: 388  RVTIPSMLPACGNIAALVHGRSAHGFAVRVHLLDDVHVGSALIDMYAKCGRINMSQMVFD 447

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             +    R L+ WN+++S Y+ HG   E +S F+ ++R  ++PDFISFT LLS CS  GL 
Sbjct: 448  MMPT--RNLVCWNSLMSGYSMHGKAKEVMSIFDSLVRTRLKPDFISFTSLLSACSQVGLT 505

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            D G KYF  M + Y ++PR+EHY+C+V LLGRAG L EA +LI  +P +P   +WGALL 
Sbjct: 506  DEGWKYFGMMTEEYGIKPRLEHYSCMVSLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLN 565

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR Q N+++ EIAA KLF LEPEN G YVLLSN+YA  G W EVD++R  ++  G+KK+
Sbjct: 566  SCRLQNNVDLAEIAAEKLFDLEPENPGTYVLLSNIYAAKGMWAEVDSVRNKMESLGLKKN 625

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW ++  K +  L GD SHPQ ++I   ++ + K+++++G+ PN  F L DV E+EK
Sbjct: 626  PGCSWIQVKNKVYTLLAGDKSHPQIEQITEKMDEISKEMRKSGHRPNLDFALQDVEEQEK 685

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            EQ L  HSEKLA+ FGLLNT  GT L+V KNLRICGDCH+  KFIS    REIFVRD NR
Sbjct: 686  EQILLGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHSVIKFISGYAGREIFVRDTNR 745

Query: 1254 FHHFKDGSCSCGDYW 1298
            FHHFKDG CSCGD+W
Sbjct: 746  FHHFKDGICSCGDFW 760



 Score = 89.7 bits (221), Expect = 4e-15
 Identities = 85/354 (24%), Positives = 161/354 (45%), Gaps = 7/354 (1%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKR----NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            + G ++    +  +M K     NI+SW  ++SG++++G  + A+ +F++M        P+
Sbjct: 194  RKGCLEDVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHEEAVIMFQKMHHLG--FFPD 251

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             V + SVLP+   S  L+ GR+IH Y  + GL     V +A+I MY K G +      FE
Sbjct: 252  EVAVSSVLPSVGDSEKLDMGRQIHGYVIKQGLLKDKCVTSAMIDMYGKSGQVYGIIKLFE 311

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             + + E G+   N  I+  + +G   +A+  FE      ++ + +S+T +++GC+ +G  
Sbjct: 312  QVELMETGVC--NACITGLSRNGLIDKALEMFELFKEQNIELNVVSWTSIIAGCAQNGKD 369

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
               L+ F  M +V  V+P                         NR+ +        ++L 
Sbjct: 370  IEALELFREM-QVARVKP-------------------------NRVTIP-------SMLP 396

Query: 714  ACRTQGNLEIGEIA---ARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGM 884
            AC     L  G  A   A ++ +L+  + G+   L +MYA  GR     N+  ++ D   
Sbjct: 397  ACGNIAALVHGRSAHGFAVRVHLLDDVHVGS--ALIDMYAKCGR----INMSQMVFDMMP 450

Query: 885  KKSPGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFV 1046
             ++  C W  +       + G + H +AKE+  + ++L +   +  ++  TS +
Sbjct: 451  TRNLVC-WNSL-------MSGYSMHGKAKEVMSIFDSLVRTRLKPDFISFTSLL 496



 Score = 74.3 bits (181), Expect = 2e-10
 Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
 Frame = +3

Query: 60  NIISWTAMISGYSQNGLVDRALDLFEEMQRE----DSEVKPNWVTIMSVLPACTHSAALE 227
           ++ S++++I   ++  L  ++L +F  M       D+ V PN      +   C   +A +
Sbjct: 80  SVYSFSSLIYALTKAKLFSQSLGVFSRMFSHGLIPDTHVLPN------LFKVCAELSAFK 133

Query: 228 HGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISA 407
            G++IH  +  +GL   + V  +L  MY +CG + DAR  F+ +S  E+ ++  + ++  
Sbjct: 134 AGKQIHCVSCTLGLDEDAFVQGSLFHMYMRCGRMGDARKVFDRMS--EKDVVTCSALLCG 191

Query: 408 YASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGM 563
           YA  G   + V    +M ++G++P+ +S+ G+LSG + SG  +  +  F  M
Sbjct: 192 YARKGCLEDVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHEEAVIMFQKM 243


>gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]
          Length = 728

 Score =  457 bits (1177), Expect = e-126
 Identities = 226/437 (51%), Positives = 296/437 (67%), Gaps = 6/437 (1%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKR------NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVK 167
            +NG ++ A E+F K  ++      NI+SWT++I+  SQNG    AL+LF EMQ E    K
Sbjct: 296  RNGFVEDALEVFRKFKRQQQAMQLNIVSWTSVIACCSQNGKDMDALELFREMQLEG--FK 353

Query: 168  PNWVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHC 347
            PN VTI  +LPAC + AAL +G+  H ++ R+G+     V +ALI MY  CG L  +R C
Sbjct: 354  PNSVTIPCMLPACGNIAALTYGKAAHCFSLRMGIFDNLYVGSALIDMYGNCGKLHLSRLC 413

Query: 348  FESISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSG 527
            F+ + V  R L+ WN ++S YA HG   E +  F+ M ++G +PDFISFT +LS CS +G
Sbjct: 414  FDQLPV--RNLVCWNAIMSGYAMHGKARETIEIFQMMQKSGQKPDFISFTCVLSACSQNG 471

Query: 528  LVDVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGAL 707
            L D G  YF+ M K + +E R+EHYAC+V LLGR+G L EA  LIN+MPM+P   +WG+L
Sbjct: 472  LTDEGWHYFSSMSKEHGIEARLEHYACMVTLLGRSGKLEEAYSLINKMPMEPDACVWGSL 531

Query: 708  LAACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMK 887
            L++CR   N+ +GE+AA KLF LEP N GNYV+LSN+Y   G W +VD +R ++  +G++
Sbjct: 532  LSSCRVHNNVSLGEVAAEKLFELEPRNPGNYVILSNIYGSKGMWSQVDRVRDMMNQKGLR 591

Query: 888  KSPGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEE 1067
            K+PGCSW E+  + H+ L GD SHPQ  +I   L  L  ++K +GY PN +FVL DV E+
Sbjct: 592  KNPGCSWIEVKNEVHMLLAGDKSHPQRIQIIGKLNKLSMEMKNSGYFPNFTFVLQDVEEQ 651

Query: 1068 EKEQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDV 1247
            +K   L  HSEKLA+AFGLLNT  G+ LRV KNLRICGDCH   KFIS    REIFVRD 
Sbjct: 652  DKVHILCGHSEKLAVAFGLLNTPPGSSLRVIKNLRICGDCHVVIKFISSFEQREIFVRDT 711

Query: 1248 NRFHHFKDGSCSCGDYW 1298
            NRFHHFKDG CSCGDYW
Sbjct: 712  NRFHHFKDGHCSCGDYW 728



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 52/168 (30%), Positives = 91/168 (54%)
 Frame = +3

Query: 60  NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHGRR 239
           ++  ++ +I   S+ G    +L LF  M     ++ P+     S++ A +   +LE G++
Sbjct: 71  DLFCFSTLIHASSKLGRFSFSLRLFSRMLSR--QIFPDAFLFPSLVKASSGLPSLEVGKQ 128

Query: 240 IHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAYASH 419
           +H++A   G  S S V ++L+ MY KC  + DAR  F+ +   +R L+AW+ +IS Y+S 
Sbjct: 129 LHSFAFLFGFCSDSFVQSSLLHMYLKCDHIWDARKLFDGMP--QRDLVAWSALISGYSSR 186

Query: 420 GHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGM 563
           G   EA   F DM   G++P+ +++ G++SG S SG     +  F  M
Sbjct: 187 GLVEEAKGLFYDMGMGGLEPNVVTWNGMISGFSRSGSCSEAVDMFRRM 234


>ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Fragaria vesca subsp. vesca]
          Length = 755

 Score =  454 bits (1169), Expect = e-125
 Identities = 227/435 (52%), Positives = 295/435 (67%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSAEELF----GKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            +NG++ +A E+F    G+  + N +SWT++I+  SQNG    AL+LF EMQ E   V+PN
Sbjct: 325  RNGLVDNALEVFMQFKGQGVELNTVSWTSIIASCSQNGKDMEALELFREMQIEG--VEPN 382

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             +TI  +LPAC + AAL HG+  H +A R G+ S   V +ALI MYAKCG +  +R CF+
Sbjct: 383  SMTISCLLPACGNIAALTHGKAAHCFAFRRGMLSDVYVGSALIDMYAKCGKIQLSRLCFD 442

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             +    R L+ WN ++S YA HG   E +  F  M R+G++PD ISFT +LS CS +GL 
Sbjct: 443  KMPT--RNLVCWNAVMSGYAMHGKAKETMEIFHMMQRSGLKPDIISFTCVLSACSQNGLT 500

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            + G  YFN M K + +E R+EHYAC+V LLGRAG L EA  +I +MP +P   +WGALL+
Sbjct: 501  EEGWYYFNSMSKEHGIEARIEHYACMVTLLGRAGKLDEAYSMIKKMPFEPDACVWGALLS 560

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR   N+ +GE  A+KLF LEP N GNY+LLSN+YA  G W EVD +R  +K  G++K+
Sbjct: 561  SCRVHNNVTLGESTAKKLFNLEPGNPGNYILLSNIYASKGMWTEVDRVRDTMKSLGLRKN 620

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW E     H+ L GD +HPQ  +I   L  L  ++K++GY+P+T FVL DV E+EK
Sbjct: 621  PGCSWIEFKNNVHMLLAGDKTHPQMNKITEKLNTLSSEMKKSGYLPSTHFVLQDVEEQEK 680

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            EQ L  HSEKLA+  GLLNT  G+ LRV KNLRICGDCH+  KFIS +  REI VRD NR
Sbjct: 681  EQILCGHSEKLAVVLGLLNTPPGSSLRVIKNLRICGDCHSVIKFISSLEGREISVRDTNR 740

Query: 1254 FHHFKDGSCSCGDYW 1298
            FHHFKDG CSCGDYW
Sbjct: 741  FHHFKDGVCSCGDYW 755



 Score = 70.1 bits (170), Expect = 3e-09
 Identities = 45/157 (28%), Positives = 79/157 (50%)
 Frame = +3

Query: 60  NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHGRR 239
           N+ S++ +I  +++      AL LF +M      + P+     SV+ AC    + +  R+
Sbjct: 75  NLFSFSTLIHAFAKLNSFGNALSLFSQMLSRG--LAPDSFLFPSVVKACAGLQSSQSARQ 132

Query: 240 IHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAYASH 419
           +H  +   G    S V ++L+ MY KC  + DAR  F+   V ER +I ++ +IS Y+  
Sbjct: 133 VHAISFSSGFALDSFVQSSLVHMYIKCDRIGDARKVFD--RVPERDVIIYSALISGYSRR 190

Query: 420 GHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGL 530
           G   EA+    +M   G  P+ + + G+++G S S L
Sbjct: 191 GCVDEAMRLLGEMRGLGFVPNVVLWNGMIAGFSQSKL 227


>ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508723216|gb|EOY15113.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 758

 Score =  454 bits (1168), Expect = e-125
 Identities = 223/435 (51%), Positives = 296/435 (68%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKR----NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            +NG++  A E F +   +    N++SWT++I+G SQNG    AL+LF EMQ   + +KPN
Sbjct: 328  RNGLVDVALETFQRFRVQGRELNVVSWTSIIAGCSQNGKDIEALELFREMQ--SARLKPN 385

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI  +LPAC + AAL HG+  H +A R G+ +   V +AL+ MYAKCG +  +R CF+
Sbjct: 386  SVTIPCLLPACGNIAALIHGKAAHGFAIRTGIANDVHVGSALVDMYAKCGRIHLSRLCFD 445

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             I    +  + WN ++  YA HG   EA+  F  M R G +PDFISF+ +LS CS  GL 
Sbjct: 446  RIP--SKNSVCWNAIMGGYAMHGKAKEAIDIFHMMQRRGQKPDFISFSCVLSACSQGGLT 503

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            + G  +FN M + + V+ ++EHY+C+V+LLGR+G L +A  LI +MP +P   +WGALL+
Sbjct: 504  EEGWHFFNSMSRDHGVKAKMEHYSCMVNLLGRSGKLEQAYALIQQMPFEPDACVWGALLS 563

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR   N+ +GEIAA+ LF LEP N GNY+LLSN+YA  G W EVD +R +++ +GMKK+
Sbjct: 564  SCRLHNNISLGEIAAQNLFKLEPSNPGNYILLSNIYASKGMWDEVDAVRDVMRSRGMKKN 623

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW EI  + H+ L GD SHPQ  EI   +  L   +K+AGY+PNT FVL DV E++K
Sbjct: 624  PGCSWIEIKNQVHMLLAGDKSHPQMTEIIEKIYKLSMDMKKAGYLPNTDFVLQDVDEQDK 683

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            EQ L  HSEKLA+AFGLLNT  G+ L++ KNLRICGDCH   KFIS    REI+VRD NR
Sbjct: 684  EQILCGHSEKLAVAFGLLNTPPGSPLQIIKNLRICGDCHAVIKFISGFEGREIYVRDTNR 743

Query: 1254 FHHFKDGSCSCGDYW 1298
            FHHFKDG CSC DYW
Sbjct: 744  FHHFKDGVCSCRDYW 758



 Score = 82.0 bits (201), Expect = 8e-13
 Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
 Frame = +3

Query: 6   KNGVIQSAEELFGKMSK----RNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
           + G +  A+E+F  M       N++SW  MI+G++Q+   + A+ +F+EM  E     P+
Sbjct: 190 RKGCVNEAKEIFYGMQSFGVGPNLVSWNGMITGFNQSEQYNEAVVMFKEMHSEG--FLPD 247

Query: 174 WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
            +TI SV  A      L  G ++  Y  ++GL     V++AL+ M+ KC    +    FE
Sbjct: 248 DITISSVFSAVGDLERLNIGIQVLCYVIKLGLLHCKFVISALMDMFGKCACAGELMKAFE 307

Query: 354 SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
            +        A N +I+  + +G    A+ TF+     G + + +S+T +++GCS +G  
Sbjct: 308 EVDEEIMDTGALNALITGLSRNGLVDVALETFQRFRVQGRELNVVSWTSIIAGCSQNGKD 367

Query: 534 DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAK 653
              L+ F  M     ++P      C++   G    L+  K
Sbjct: 368 IEALELFREMQSA-RLKPNSVTIPCLLPACGNIAALIHGK 406


>ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g20230 gi|332191832|gb|AEE29953.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  454 bits (1167), Expect = e-125
 Identities = 222/435 (51%), Positives = 299/435 (68%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKR----NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            +NG++  A E+F    ++    N++SWT++I+G +QNG    AL+LF EMQ   + VKPN
Sbjct: 330  RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV--AGVKPN 387

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI S+LPAC + AAL HGR  H +A R+ L     V +ALI MYAKCG +  ++  F 
Sbjct: 388  HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             +    + L+ WN++++ ++ HG   E +S FE ++R  ++PDFISFT LLS C   GL 
Sbjct: 448  MMPT--KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            D G KYF  M + Y ++PR+EHY+C+V+LLGRAG L EA +LI  MP +P   +WGALL 
Sbjct: 506  DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR Q N+++ EIAA KLF LEPEN G YVLLSN+YA  G W EVD++R  ++  G+KK+
Sbjct: 566  SCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW ++  + +  L GD SHPQ  +I   ++ + K+++++G+ PN  F LHDV E+E+
Sbjct: 626  PGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQ 685

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            EQ L  HSEKLA+ FGLLNT  GT L+V KNLRICGDCH   KFIS    REIF+RD NR
Sbjct: 686  EQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNR 745

Query: 1254 FHHFKDGSCSCGDYW 1298
            FHHFKDG CSCGD+W
Sbjct: 746  FHHFKDGICSCGDFW 760



 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 33/253 (13%)
 Frame = +3

Query: 15  VIQSAEELFGKMSKRNIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSV 194
           V++   E+     + NI+SW  ++SG++++G    A+ +F+++        P+ VT+ SV
Sbjct: 201 VVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG--FCPDQVTVSSV 258

Query: 195 LPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNER 374
           LP+   S  L  GR IH Y  + GL     V++A+I MY K G +      F    + E 
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318

Query: 375 G---------------------------------LIAWNTMISAYASHGHGMEAVSTFED 455
           G                                 +++W ++I+  A +G  +EA+  F +
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378

Query: 456 MIRAGVQPDFISFTGLLSGCSHSGLVDVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAG 635
           M  AGV+P+ ++   +L  C +   +  G +  +G     ++   V   + ++D+  + G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437

Query: 636 YLMEAKELINRMP 674
            +  ++ + N MP
Sbjct: 438 RINLSQIVFNMMP 450



 Score = 67.0 bits (162), Expect = 3e-08
 Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
 Frame = +3

Query: 63  IISWTAMISGYSQNGLVDRALDLFEEMQRE----DSEVKPNWVTIMSVLPACTHSAALEH 230
           I S++++I   ++  L  +++ +F  M       DS V PN      +   C   +A + 
Sbjct: 81  IYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPN------LFKVCAELSAFKV 134

Query: 231 GRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERGLIAWNTMISAY 410
           G++IH  +   GL   + V  ++  MY +CG + DAR  F+ +S  ++ ++  + ++ AY
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS--DKDVVTCSALLCAY 192

Query: 411 ASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSG 527
           A  G   E V    +M  +G++ + +S+ G+LSG + SG
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231


>ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Capsella rubella]
            gi|482575552|gb|EOA39739.1| hypothetical protein
            CARUB_v10008385mg [Capsella rubella]
          Length = 760

 Score =  452 bits (1164), Expect = e-124
 Identities = 222/435 (51%), Positives = 300/435 (68%), Gaps = 4/435 (0%)
 Frame = +3

Query: 6    KNGVIQSAEELFGKMSKR----NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPN 173
            +NG++  A E+F    ++    N++SWT++I+G +QNG    AL+LF EMQ   + VKPN
Sbjct: 330  RNGLVDKALEMFELFKEQKVELNVVSWTSIIAGCAQNGKDIEALELFREMQV--AGVKPN 387

Query: 174  WVTIMSVLPACTHSAALEHGRRIHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFE 353
             VTI S+LPAC + AAL HGR  H +A R+ L     V +ALI MYAKCG +  ++  F 
Sbjct: 388  RVTIPSMLPACGNIAALGHGRSTHGFAVRVHLWDDVHVGSALIDMYAKCGRINMSQFVFN 447

Query: 354  SISVNERGLIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTGLLSGCSHSGLV 533
             +    + L+ WN++++ Y+ HG   E +S FE ++R  ++PDFISFT LL+ C   GL 
Sbjct: 448  MMPT--KNLVCWNSLMNGYSMHGKAKEVMSIFESLLRTRLKPDFISFTSLLASCGQVGLT 505

Query: 534  DVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQPGPSIWGALLA 713
            D G KYF+ M + Y ++PR+EHY+C+V+LLGRAG L EA ELI  MP +P   +WGALL 
Sbjct: 506  DEGWKYFSMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYELIKEMPFEPDSCVWGALLN 565

Query: 714  ACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGRWQEVDNLRAILKDQGMKKS 893
            +CR Q N+++ EIAA KLF LEPEN G YVLLSN+YA  G W EVD++R  ++  G+KK+
Sbjct: 566  SCRLQSNVDLAEIAADKLFDLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625

Query: 894  PGCSWTEINGKAHLFLGGDTSHPQAKEIHMLLEALPKKIKEAGYVPNTSFVLHDVSEEEK 1073
            PGCSW ++  + +  L GD SHPQ  +I   ++ + ++++++G+ PN  F L DV E+E+
Sbjct: 626  PGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQ 685

Query: 1074 EQNLTTHSEKLAIAFGLLNTCHGTILRVTKNLRICGDCHTATKFISRIYDREIFVRDVNR 1253
            EQ L  HSEKLA+ FGLLNT  GT L+V KNLRICGDCH+  KFIS    REIFVRD NR
Sbjct: 686  EQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHSVIKFISSYAGREIFVRDTNR 745

Query: 1254 FHHFKDGSCSCGDYW 1298
            FHHFKDG CSCGD+W
Sbjct: 746  FHHFKDGICSCGDFW 760



 Score = 87.4 bits (215), Expect = 2e-14
 Identities = 64/292 (21%), Positives = 131/292 (44%), Gaps = 33/292 (11%)
 Frame = +3

Query: 60   NIISWTAMISGYSQNGLVDRALDLFEEMQREDSEVKPNWVTIMSVLPACTHSAALEHGRR 239
            NI+SW  ++SG++++G    A+ +F++M        P+ VT+ SVLP+   S  L  GR+
Sbjct: 216  NIVSWNGILSGFNRSGYHREAVIMFQKMHL--CGFSPDQVTVSSVLPSVGDSEMLNMGRQ 273

Query: 240  IHNYANRIGLGSKSSVLTALIAMYAKCGSLVDARHCFESISVNERG-------------- 377
            IH Y  + GL     V++A++ MY K G +      F+   + E G              
Sbjct: 274  IHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGL 333

Query: 378  -------------------LIAWNTMISAYASHGHGMEAVSTFEDMIRAGVQPDFISFTG 500
                               +++W ++I+  A +G  +EA+  F +M  AGV+P+ ++   
Sbjct: 334  VDKALEMFELFKEQKVELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPS 393

Query: 501  LLSGCSHSGLVDVGLKYFNGMGKVYYVEPRVEHYACVVDLLGRAGYLMEAKELINRMPMQ 680
            +L  C +   +  G +  +G     ++   V   + ++D+  + G +  ++ + N MP +
Sbjct: 394  MLPACGNIAALGHG-RSTHGFAVRVHLWDDVHVGSALIDMYAKCGRINMSQFVFNMMPTK 452

Query: 681  PGPSIWGALLAACRTQGNLEIGEIAARKLFVLEPENSGNYVLLSNMYADVGR 836
                 W +L+      G  +  E+ +    +L      +++  +++ A  G+
Sbjct: 453  -NLVCWNSLMNGYSMHGKAK--EVMSIFESLLRTRLKPDFISFTSLLASCGQ 501