BLASTX nr result
ID: Akebia24_contig00019611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00019611
(220 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006829248.1| hypothetical protein AMTR_s00001p00272570 [A... 74 4e-12
ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriod... 74 3e-11
ref|XP_004987302.1| PREDICTED: 60S ribosomal protein L2, mitocho... 71 1e-10
ref|YP_514664.1| ribosomal protein L2 [Oryza sativa Indica Group... 71 1e-10
sp|P92812.2|RM02_ORYSJ RecName: Full=60S ribosomal protein L2, m... 71 1e-10
ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoeni... 71 1e-10
ref|YP_003433878.1| ribosomal protein large subunit 2 [Oryza ruf... 71 1e-10
gb|AHA47111.1| ribosomal protein L2 (mitochondrion) [Amborella t... 70 2e-10
ref|YP_001661414.1| ribosomal protein L2 [Cycas taitungensis] gi... 69 7e-10
ref|NP_054418.1| ribosomal protein L2 [Marchantia polymorpha] gi... 68 1e-09
ref|YP_004927673.1| ribosomal protein L2 (mitochondrion) [Treubi... 68 1e-09
ref|YP_003275976.1| ribosomal protein L2 (mitochondrion) [Pleuro... 68 1e-09
ref|YP_008378703.1| ribosomal protein L2 (mitochondrion) [Anomod... 67 3e-09
ref|YP_004927639.1| ribosomal protein L2 (mitochondrion) [Anomod... 67 3e-09
gb|AEB40006.1| ribosomal protein L2 [Funaria hygrometrica] 66 6e-09
ref|YP_539032.1| ribosomal protein L2 [Physcomitrella patens] gi... 66 6e-09
ref|YP_006234374.1| rpl2 gene product (mitochondrion) [Huperzia ... 64 2e-08
gb|AAL48204.1|AF387174_1 ribosomal protein L2 [Dicentra sp. Qiu ... 64 2e-08
ref|XP_004966117.1| PREDICTED: 60S ribosomal protein L2, mitocho... 62 8e-08
ref|XP_002444624.1| hypothetical protein SORBIDRAFT_07g024980 [S... 62 8e-08
>ref|XP_006829248.1| hypothetical protein AMTR_s00001p00272570 [Amborella trichopoda]
gi|548834227|gb|ERM96664.1| hypothetical protein
AMTR_s00001p00272570 [Amborella trichopoda]
Length = 335
Score = 73.6 bits (179), Expect(2) = 4e-12
Identities = 37/54 (68%), Positives = 38/54 (70%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN*FMPRRSI 164
RGVAMNPVDHPH RPSVSPWG PTKAGF+ VGK RN FMPRR I
Sbjct: 132 RGVAMNPVDHPHGGGEGRTNGGRPSVSPWG-PTKAGFQTVVGKHRNSFMPRRYI 184
Score = 23.1 bits (48), Expect(2) = 4e-12
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 188 FIDAFLLRMK 217
F+DAFLLRMK
Sbjct: 189 FVDAFLLRMK 198
>ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriodendron tulipifera]
gi|480541934|gb|AGJ90427.1| ribosomal protein L2
(mitochondrion) [Liriodendron tulipifera]
Length = 554
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/48 (75%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA--GVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA GVGKRRN
Sbjct: 507 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAVVGVGKRRN 554
>ref|XP_004987302.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Setaria
italica]
Length = 340
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA--GVGKRR 137
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA GVGKRR
Sbjct: 293 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAVVGVGKRR 339
>ref|YP_514664.1| ribosomal protein L2 [Oryza sativa Indica Group]
gi|194033244|ref|YP_002000581.1| ribosomal protein L2
[Oryza sativa Japonica Group]
gi|23495405|dbj|BAC19886.1| Ribosomal protein L2 [Oryza
sativa Japonica Group] gi|74100083|gb|AAZ99247.1|
ribosomal protein L2 (mitochondrion) [Oryza sativa
Indica Group] gi|74100138|gb|AAZ99301.1| ribosomal
protein L2 (mitochondrion) [Oryza sativa Japonica Group]
gi|74100192|gb|AAZ99354.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Japonica Group]
gi|353685231|gb|AER12994.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|353685298|gb|AER13060.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|374277621|gb|AEZ03727.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|374277672|gb|AEZ03777.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|528540449|dbj|BAN67503.1| ribosomal protein large
subunit 2 (mitochondrion) [Oryza rufipogon]
gi|528540486|dbj|BAN67539.1| ribosomal protein large
subunit 2 (mitochondrion) [Oryza rufipogon]
Length = 502
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA--GVGKRR 137
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA GVGKRR
Sbjct: 455 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGVGVGKRR 501
>sp|P92812.2|RM02_ORYSJ RecName: Full=60S ribosomal protein L2, mitochondrial
gi|218547415|sp|P0C8K6.1|RM02_ORYSA RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|218551750|sp|Q2F969.2|RM02_ORYSI RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|193240423|dbj|BAA11350.2| ribosomal protein L2 [Oryza
sativa Japonica Group]
Length = 502
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA--GVGKRR 137
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA GVGKRR
Sbjct: 455 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGVGVGKRR 501
>ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoenix dactylifera]
gi|343478424|gb|AEM43912.1| ribosomal protein L2
(mitochondrion) [Phoenix dactylifera]
Length = 558
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA--GVGKRR 137
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA GVGKRR
Sbjct: 511 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAVVGVGKRR 557
>ref|YP_003433878.1| ribosomal protein large subunit 2 [Oryza rufipogon]
gi|285026149|dbj|BAI67982.1| ribosomal protein large
subunit 2 [Oryza rufipogon] gi|285026205|dbj|BAI68037.1|
ribosomal protein large subunit 2 [Oryza sativa Indica
Group]
Length = 504
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA--GVGKRR 137
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA GVGKRR
Sbjct: 457 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGVGVGKRR 503
>gb|AHA47111.1| ribosomal protein L2 (mitochondrion) [Amborella trichopoda]
Length = 632
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/46 (71%), Positives = 33/46 (71%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKPTKAGFR VGKR N
Sbjct: 587 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRTVVGKRIN 632
>ref|YP_001661414.1| ribosomal protein L2 [Cycas taitungensis]
gi|166706952|dbj|BAF98416.1| ribosomal protein L2 [Cycas
taitungensis]
Length = 477
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/46 (69%), Positives = 33/46 (71%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWG+PTKAG R VGKRRN
Sbjct: 432 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGEPTKAGSRTVVGKRRN 477
>ref|NP_054418.1| ribosomal protein L2 [Marchantia polymorpha]
gi|417680|sp|P26859.2|RM02_MARPO RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|250831|gb|AAB22423.1| ribosomal protein L2
[Marchantia polymorpha=liverwort, Peptide Mitochondrial,
501 aa] gi|786202|gb|AAC09415.1| rpl2 [Marchantia
polymorpha]
Length = 501
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKPTK GF+ V KRRN
Sbjct: 456 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKGGFKTVVRKRRN 501
>ref|YP_004927673.1| ribosomal protein L2 (mitochondrion) [Treubia lacunosa]
gi|336089531|gb|AEH99720.1| ribosomal protein L2
[Treubia lacunosa]
Length = 523
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKPTK GF+ V KRRN
Sbjct: 478 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKGGFKTVVRKRRN 523
>ref|YP_003275976.1| ribosomal protein L2 (mitochondrion) [Pleurozia purpurea]
gi|237780714|gb|ACR19360.1| ribosomal protein L2
[Pleurozia purpurea]
Length = 521
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/46 (67%), Positives = 32/46 (69%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKPTK GF+ V KRRN
Sbjct: 476 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKGGFKTVVRKRRN 521
>ref|YP_008378703.1| ribosomal protein L2 (mitochondrion) [Anomodon attenuatus]
gi|402746442|gb|AFQ94027.1| ribosomal protein L2
(mitochondrion) [Anomodon attenuatus]
Length = 463
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/46 (67%), Positives = 31/46 (67%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKP K GFR V KRRN
Sbjct: 418 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPAKGGFRTVVRKRRN 463
>ref|YP_004927639.1| ribosomal protein L2 (mitochondrion) [Anomodon rugelii]
gi|336089496|gb|AEH99686.1| ribosomal protein L2
[Anomodon rugelii]
Length = 463
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/46 (67%), Positives = 31/46 (67%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKP K GFR V KRRN
Sbjct: 418 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPAKGGFRTVVRKRRN 463
>gb|AEB40006.1| ribosomal protein L2 [Funaria hygrometrica]
Length = 463
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/46 (65%), Positives = 31/46 (67%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKP K GF+ V KRRN
Sbjct: 418 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPAKGGFKTVVRKRRN 463
>ref|YP_539032.1| ribosomal protein L2 [Physcomitrella patens]
gi|90991411|dbj|BAE93103.1| ribosomal protein L2
(mitochondrion) [Physcomitrella patens]
Length = 463
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/46 (65%), Positives = 31/46 (67%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRRN 140
RGVAMNPVDHPH RPSVSPWGKP K GF+ V KRRN
Sbjct: 418 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPAKGGFKTVVRKRRN 463
>ref|YP_006234374.1| rpl2 gene product (mitochondrion) [Huperzia squarrosa]
gi|359741367|gb|AEV55715.1| ribosomal protein L2
(mitochondrion) [Huperzia squarrosa]
Length = 583
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRAGVGKRR 137
RGVAMNPVDHPH RPSVSPWGKPTK GF+ V KR+
Sbjct: 538 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKGGFKTVVRKRK 582
>gb|AAL48204.1|AF387174_1 ribosomal protein L2 [Dicentra sp. Qiu 95026]
Length = 186
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/39 (74%), Positives = 29/39 (74%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA 119
RGVAMNPVDHPH RPSVSPWGKPTKAGFRA
Sbjct: 148 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRA 186
>ref|XP_004966117.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like isoform X1
[Setaria italica] gi|514766931|ref|XP_004966118.1|
PREDICTED: 60S ribosomal protein L2, mitochondrial-like
isoform X2 [Setaria italica]
Length = 437
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA 119
RGVAMNPVDHPH RPSVSPWGKPTKAG+R+
Sbjct: 391 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 429
>ref|XP_002444624.1| hypothetical protein SORBIDRAFT_07g024980 [Sorghum bicolor]
gi|241940974|gb|EES14119.1| hypothetical protein
SORBIDRAFT_07g024980 [Sorghum bicolor]
Length = 450
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 3 RGVAMNPVDHPHXXXXXXXXXXRPSVSPWGKPTKAGFRA 119
RGVAMNPVDHPH RPSVSPWGKPTKAG+R+
Sbjct: 404 RGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRS 442