BLASTX nr result
ID: Akebia24_contig00018957
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00018957 (691 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 117 1e-54 gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 120 6e-53 gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 116 3e-52 gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 117 4e-50 ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 114 4e-50 gb|AAB82754.1| retrofit [Oryza longistaminata] 114 2e-49 gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 112 2e-49 gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 112 2e-49 gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 119 3e-49 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 117 4e-49 gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-... 117 4e-49 emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera] 113 5e-49 gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 112 5e-49 emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 119 1e-48 emb|CAA19714.1| putative protein [Arabidopsis thaliana] gi|72695... 119 1e-48 ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S... 109 2e-48 gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 112 3e-48 gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 113 4e-48 gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja... 111 5e-48 gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subc... 111 5e-48 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 117 bits (293), Expect(3) = 1e-54 Identities = 58/101 (57%), Positives = 73/101 (72%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TVARSSTE+EY++LA T E+TWV L D+ P+ P I+CDN S I+LA NP Sbjct: 1532 KKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPV 1591 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKH+E+ YHYIREKV+ + V HV++L ADIFTK Sbjct: 1592 FHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTK 1632 Score = 75.5 bits (184), Expect(3) = 1e-54 Identities = 35/54 (64%), Positives = 40/54 (74%) Frame = +2 Query: 233 IKGTIQYGLHFTSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +KGT+ GL FT G+ A+SDADWAG VDR+S SGYCVFLG N I WSAKK Sbjct: 1480 LKGTVDLGLWFTKGSQCLTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWSAKK 1533 Score = 68.2 bits (165), Expect(3) = 1e-54 Identities = 38/75 (50%), Positives = 45/75 (60%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFGDVTLYRSIVRALQYLTITRRDIAYAVNMVCQYMH 185 M K TP+ T ++ + D T YRS V ALQYLT TR D+A+AVN VCQYMH Sbjct: 1406 MLGAKPCATPVSTSKLDHS--GTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMH 1463 Query: 186 APLESHFTAVKCILR 230 +P H AVK ILR Sbjct: 1464 SPQTIHLQAVKRILR 1478 >gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 932 Score = 120 bits (300), Expect(3) = 6e-53 Identities = 58/101 (57%), Positives = 74/101 (73%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKALA TTE+TWV L +L I P V Q+WCDN+ A L++NP Sbjct: 815 RKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPV 874 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIE+ YH++RE+V KK L + +ST + AD FTK Sbjct: 875 FHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTK 915 Score = 70.5 bits (171), Expect(3) = 6e-53 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 3/79 (3%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAF---GDVTLYRSIVRALQYLTITRRDIAYAVNMVC 173 GM CK +TP+ T + + D F D + YRSIV ALQYLT+TR D+++ VN VC Sbjct: 683 GMSICKPASTPLST-TEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVC 741 Query: 174 QYMHAPLESHFTAVKCILR 230 Q++H+P H++AVK ILR Sbjct: 742 QFLHSPTTVHWSAVKRILR 760 Score = 65.1 bits (157), Expect(3) = 6e-53 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 IKGT+++GL F S ++ +A+SDADWAG S DR+S G+ VFLG N I WSA+K Sbjct: 762 IKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARK 816 >gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1313 Score = 116 bits (291), Expect(3) = 3e-52 Identities = 56/101 (55%), Positives = 73/101 (72%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K PTV+RSSTESEYKALA T EL WV + L ++ I P ++WCDN+ A L++NP Sbjct: 1194 RKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPI 1253 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++R++V KK L + +V T + AD FTK Sbjct: 1254 FHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTK 1294 Score = 81.6 bits (200), Expect(3) = 3e-52 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQ 176 GM DCK +TP+ T S G D+T YRSIV ALQYLT+TR DIA++VN VCQ Sbjct: 1062 GMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQ 1121 Query: 177 YMHAPLESHFTAVKCILR 230 ++HAP H+ AVK ILR Sbjct: 1122 FLHAPTTLHWAAVKRILR 1139 Score = 55.1 bits (131), Expect(3) = 3e-52 Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 IK GLH S + +A+SDADWAG DRKS G+ VFLG N + WSA+K Sbjct: 1141 IKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARK 1195 >gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group] gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1431 Score = 117 bits (293), Expect(3) = 4e-50 Identities = 55/101 (54%), Positives = 73/101 (72%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKALA T E+ W+ L +L I P + ++WCDNI A + +NP Sbjct: 1311 RKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPV 1370 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K LQV ++ST + AD FTK Sbjct: 1371 FHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTK 1411 Score = 75.1 bits (183), Expect(3) = 4e-50 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK TP+ + FG D T YRS+V ALQYLT+TR D++++VN VCQY Sbjct: 1180 MSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQY 1239 Query: 180 MHAPLESHFTAVKCILR 230 +HAP H+ A K ILR Sbjct: 1240 LHAPTTKHWAAAKRILR 1256 Score = 53.5 bits (127), Expect(3) = 4e-50 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T++ GL + S +L +A+SDADWAG DR S G+ VF+G N + WSA+K Sbjct: 1258 LKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSARK 1312 >ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group] Length = 821 Score = 114 bits (286), Expect(3) = 4e-50 Identities = 52/101 (51%), Positives = 74/101 (73%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKALA T E+ WV L++L + P ++WCDN+ A L++NP Sbjct: 696 RKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 755 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV +H++RE+V +K L++ ++ST + AD FTK Sbjct: 756 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 796 Score = 77.0 bits (188), Expect(3) = 4e-50 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQ 176 GM +CK +TP+ T + G D T YRS+V ALQYLT+TR DI++++N VCQ Sbjct: 564 GMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQ 623 Query: 177 YMHAPLESHFTAVKCILR 230 ++HAP +H+ AVK ILR Sbjct: 624 FLHAPTTTHWAAVKRILR 641 Score = 54.3 bits (129), Expect(3) = 4e-50 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSG-ALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T+ GL F +L + +SDADWAG DR+S G+ VFLG N + WSA+K Sbjct: 643 VKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARK 697 >gb|AAB82754.1| retrofit [Oryza longistaminata] Length = 1445 Score = 114 bits (286), Expect(3) = 2e-49 Identities = 56/101 (55%), Positives = 74/101 (73%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K PTV+RSSTE+EYKA+A TT EL WV L++L I P +IWCDN+ A L++NP Sbjct: 1326 RKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPV 1385 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K L++ V + + AD FTK Sbjct: 1386 FHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTK 1426 Score = 75.5 bits (184), Expect(3) = 2e-49 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M +CK +TP+ S G D YRSIV ALQYLT+TR DIAY+VN VCQ+ Sbjct: 1195 MSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQF 1254 Query: 180 MHAPLESHFTAVKCILR 230 +HAP SH+ AVK ILR Sbjct: 1255 LHAPTTSHWIAVKRILR 1271 Score = 53.9 bits (128), Expect(3) = 2e-49 Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%) Frame = +2 Query: 254 GLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 GLH S + + YSDADWAG DRKS G+ VFLG N + WSA+K Sbjct: 1280 GLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARK 1327 >gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica Group] Length = 1399 Score = 112 bits (280), Expect(3) = 2e-49 Identities = 51/101 (50%), Positives = 73/101 (72%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSS E+EYKALA T E+ WV L++L + P ++WCDN+ A L++NP Sbjct: 1274 RKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 1333 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV +H++RE+V +K L++ ++ST + AD FTK Sbjct: 1334 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 1374 Score = 77.0 bits (188), Expect(3) = 2e-49 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQ 176 GM +CK +TP+ T + G D T YRS+V ALQYLT+TR DI++++N VCQ Sbjct: 1142 GMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQ 1201 Query: 177 YMHAPLESHFTAVKCILR 230 ++HAP +H+ AVK ILR Sbjct: 1202 FLHAPTTTHWAAVKRILR 1219 Score = 54.3 bits (129), Expect(3) = 2e-49 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSG-ALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T+ GL F +L + +SDADWAG DR+S G+ VFLG N + WSA+K Sbjct: 1221 VKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARK 1275 >gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group] Length = 391 Score = 112 bits (280), Expect(3) = 2e-49 Identities = 51/101 (50%), Positives = 73/101 (72%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSS E+EYKALA T E+ WV L++L + P ++WCDN+ A L++NP Sbjct: 266 RKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 325 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV +H++RE+V +K L++ ++ST + AD FTK Sbjct: 326 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTK 366 Score = 77.0 bits (188), Expect(3) = 2e-49 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQ 176 GM +CK +TP+ T + G D T YRS+V ALQYLT+TR DI++++N VCQ Sbjct: 134 GMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQ 193 Query: 177 YMHAPLESHFTAVKCILR 230 ++HAP +H+ AVK ILR Sbjct: 194 FLHAPTTTHWAAVKRILR 211 Score = 54.3 bits (129), Expect(3) = 2e-49 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSG-ALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T+ GL F +L + +SDADWAG DR+S G+ VFLG N + WSA+K Sbjct: 213 VKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARK 267 >gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|31433472|gb|AAP54977.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1031 Score = 119 bits (297), Expect(3) = 3e-49 Identities = 56/101 (55%), Positives = 74/101 (73%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKALA T E+ W+ L +L I VP + ++WCDNI A + +NP Sbjct: 911 RKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTANPV 970 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K LQV ++ST + AD FTK Sbjct: 971 FHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTK 1011 Score = 69.7 bits (169), Expect(3) = 3e-49 Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK TP+ + G D T YRS+V ALQYLT+TR D++++VN VCQY Sbjct: 780 MSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQY 839 Query: 180 MHAPLESHFTAVKCILR 230 +HA H+ A K ILR Sbjct: 840 LHAATTKHWVAAKRILR 856 Score = 54.7 bits (130), Expect(3) = 3e-49 Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T++ GL + S +L +A+SDADWAG DR+S G+ VF+G N + WSA+K Sbjct: 858 LKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARK 912 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 117 bits (293), Expect(3) = 4e-49 Identities = 58/101 (57%), Positives = 75/101 (74%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKALA T E+ WV L++L+I P + Q+WCDN+ A L+ NP Sbjct: 1312 KKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPV 1371 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K LQV +VST + AD FTK Sbjct: 1372 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTK 1412 Score = 73.9 bits (180), Expect(3) = 4e-49 Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK TP+ + G D T YRSIV ALQYLT+TR DIA++VN VCQ+ Sbjct: 1181 MSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLTLTRLDIAFSVNKVCQF 1240 Query: 180 MHAPLESHFTAVKCILR 230 +H P H+ AVK ILR Sbjct: 1241 LHNPTTEHWAAVKRILR 1257 Score = 51.6 bits (122), Expect(3) = 4e-49 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +2 Query: 269 SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 S ++ + YSDADWAG DR+S G+ V+LGDN + W+AKK Sbjct: 1272 SSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKK 1313 >gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] Length = 352 Score = 117 bits (293), Expect(3) = 4e-49 Identities = 58/101 (57%), Positives = 75/101 (74%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKALA T E+ WV L++L+I P + Q+WCDN+ A L+ NP Sbjct: 227 KKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPV 286 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K LQV +VST + AD FTK Sbjct: 287 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTK 327 Score = 73.9 bits (180), Expect(3) = 4e-49 Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK TP+ + G D T YRSIV ALQYLT+TR DIA++VN VCQ+ Sbjct: 96 MSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLTLTRLDIAFSVNKVCQF 155 Query: 180 MHAPLESHFTAVKCILR 230 +H P H+ AVK ILR Sbjct: 156 LHNPTTEHWAAVKRILR 172 Score = 51.6 bits (122), Expect(3) = 4e-49 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +2 Query: 269 SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 S ++ + YSDADWAG DR+S G+ V+LGDN + W+AKK Sbjct: 187 SSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKK 228 >emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera] Length = 1556 Score = 113 bits (283), Expect(3) = 5e-49 Identities = 53/101 (52%), Positives = 73/101 (72%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K T++RSSTE+EY+A+A TT ELTW+S L D HIP+ P ++ DN SA+ +A NP Sbjct: 1391 KKQHTISRSSTEAEYRAMAHTTAELTWMSFILNDFHIPLASTPTLYYDNTSALHMAINPV 1450 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHAR+KHIE+ YH++RE+V L H+ST + AD+FTK Sbjct: 1451 FHARSKHIELDYHFVRERVALGLLVTQHISTEKQVADLFTK 1491 Score = 67.8 bits (164), Expect(3) = 5e-49 Identities = 34/55 (61%), Positives = 38/55 (69%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSGA-LRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +KGTI GLHFTS L A+SDADWAG R+SI+GYC FLG N I W AKK Sbjct: 1338 VKGTIDIGLHFTSHTTLDLCAFSDADWAGCLTTRRSITGYCTFLGGNIISWCAKK 1392 Score = 61.2 bits (147), Expect(3) = 5e-49 Identities = 32/75 (42%), Positives = 45/75 (60%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFGDVTLYRSIVRALQYLTITRRDIAYAVNMVCQYMH 185 M DCK +TP+ K+ + D + +R +V ALQYLT+TR D++Y+VN Q+MH Sbjct: 1263 MVDCKPMSTPLEAKTKTLPN-SVLLEDPSYFRGLVGALQYLTLTRPDLSYSVNYASQFMH 1321 Query: 186 APLESHFTAVKCILR 230 AP H V+ ILR Sbjct: 1322 APTLVHLKMVRRILR 1336 >gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|108706314|gb|ABF94109.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1247 Score = 112 bits (279), Expect(3) = 5e-49 Identities = 54/101 (53%), Positives = 72/101 (71%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTESEYKALA T E+ WV L +L + P + ++WCDN+ A L++NP Sbjct: 1128 RKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLSANPV 1187 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K L++ V T + AD FTK Sbjct: 1188 FHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTK 1228 Score = 75.1 bits (183), Expect(3) = 5e-49 Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK +TP+ T G D T YRS+V ALQYLT+TR DIA+ VN VCQ+ Sbjct: 997 MFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQF 1056 Query: 180 MHAPLESHFTAVKCILR 230 +HAP H+ AVK ILR Sbjct: 1057 LHAPTTHHWAAVKRILR 1073 Score = 55.5 bits (132), Expect(3) = 5e-49 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K + GL + S ++ +AYSDADWAG DR+S G+ VFLGDN + WSA+K Sbjct: 1075 LKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARK 1129 >emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1| putative protein [Arabidopsis thaliana] Length = 1318 Score = 119 bits (299), Expect(3) = 1e-48 Identities = 53/101 (52%), Positives = 77/101 (76%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K PTV+RSSTE+EYK+L+ +E+ W+S LR+L IP+P P+++CDN+SA+ L +NP+ Sbjct: 1101 KKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAVYLTANPA 1160 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKH ++ +H++RE+V K L V H+ E ADIFTK Sbjct: 1161 FHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTK 1201 Score = 67.0 bits (162), Expect(3) = 1e-48 Identities = 35/75 (46%), Positives = 43/75 (57%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFGDVTLYRSIVRALQYLTITRRDIAYAVNMVCQYMH 185 M+ C TP+P + + F D T +RSI LQYLT+TR DI +AVN VCQ MH Sbjct: 972 MEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQFAVNFVCQKMH 1031 Query: 186 APLESHFTAVKCILR 230 P S F +K ILR Sbjct: 1032 QPTISDFHLLKRILR 1046 Score = 54.3 bits (129), Expect(3) = 1e-48 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSGA-LRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKKH 397 IKGTI G+ ++ + AYSD+DW R+S+ G C F+G N + WS+KKH Sbjct: 1048 IKGTITMGISYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKH 1103 >emb|CAA19714.1| putative protein [Arabidopsis thaliana] gi|7269573|emb|CAB79575.1| putative protein [Arabidopsis thaliana] Length = 819 Score = 119 bits (299), Expect(3) = 1e-48 Identities = 53/101 (52%), Positives = 77/101 (76%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K PTV+RSSTE+EYK+L+ +E+ W+S LR+L IP+P P+++CDN+SA+ L +NP+ Sbjct: 602 KKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAVYLTANPA 661 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKH ++ +H++RE+V K L V H+ E ADIFTK Sbjct: 662 FHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTK 702 Score = 67.0 bits (162), Expect(3) = 1e-48 Identities = 35/75 (46%), Positives = 43/75 (57%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFGDVTLYRSIVRALQYLTITRRDIAYAVNMVCQYMH 185 M+ C TP+P + + F D T +RSI LQYLT+TR DI +AVN VCQ MH Sbjct: 473 MEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQFAVNFVCQKMH 532 Query: 186 APLESHFTAVKCILR 230 P S F +K ILR Sbjct: 533 QPTISDFHLLKRILR 547 Score = 54.3 bits (129), Expect(3) = 1e-48 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSGA-LRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKKH 397 IKGTI G+ ++ + AYSD+DW R+S+ G C F+G N + WS+KKH Sbjct: 549 IKGTITMGISYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKH 604 >ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor] gi|241942867|gb|EES16012.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor] Length = 757 Score = 109 bits (273), Expect(3) = 2e-48 Identities = 52/101 (51%), Positives = 72/101 (71%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 QK TV+RSSTE+EYKALA T E+ WV L +L +P V ++WCDN+ A L++NP Sbjct: 646 QKQATVSRSSTEAEYKALANATAEVMWVQKLLAELCVPHARVARLWCDNLGAKYLSANPV 705 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIE+ +H++RE+V +K L + +S+ + AD FTK Sbjct: 706 FHARTKHIEIDFHFVRERVAQKLLDIRFISSEDQLADGFTK 746 Score = 74.7 bits (182), Expect(3) = 2e-48 Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQ 176 GM K TP+P+ T G D T YRS+V ALQYLT+TR DI++AVN VCQ Sbjct: 514 GMSKSKPVHTPLPSTQKISITDGDKLGEEDCTRYRSLVGALQYLTLTRPDISFAVNKVCQ 573 Query: 177 YMHAPLESHFTAVKCILR 230 ++HAP +H +AVK ILR Sbjct: 574 FLHAPTTTHLSAVKRILR 591 Score = 55.8 bits (133), Expect(3) = 2e-48 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHFTSGALRF-NAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 I+GT ++GL R +A+S ADWAGD DR+S G+ VFLG+N I W+A+K Sbjct: 593 IQGTSKFGLRIRKSKCRIVSAFSYADWAGDVDDRRSTGGFAVFLGENLISWTAQK 647 >gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1447 Score = 112 bits (280), Expect(3) = 3e-48 Identities = 55/101 (54%), Positives = 72/101 (71%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTESEYKALA T E+ WV L +L + P + ++WCDN+ A L+SNP Sbjct: 1328 RKQATVSRSSTESEYKALANATAEIMWVQTLLTELQVQSPPMAKLWCDNLGAKYLSSNPV 1387 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE+V +K L++ V T + AD FTK Sbjct: 1388 FHARTKHIEVDYHFVRERVSQKLLEIDFVPTGDQVADGFTK 1428 Score = 74.3 bits (181), Expect(3) = 3e-48 Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK +TP+ T G D T YRS+V ALQYLT+TR DIA+ VN VCQ+ Sbjct: 1197 MFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQYLTLTRPDIAFPVNKVCQF 1256 Query: 180 MHAPLESHFTAVKCILR 230 +HAP H+ AVK ILR Sbjct: 1257 LHAPTTVHWAAVKRILR 1273 Score = 53.1 bits (126), Expect(3) = 3e-48 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = +2 Query: 269 SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 S ++ +AYSDADWAG DR+S G+ VFLGDN + W A+K Sbjct: 1288 SKSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWCARK 1329 >gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group] gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1256 Score = 113 bits (282), Expect(3) = 4e-48 Identities = 54/101 (53%), Positives = 72/101 (71%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV RSSTESEYKALA T E+ W+ L +L +P P + ++WCDN+ A L+SNP Sbjct: 1137 KKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPV 1196 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 FHARTKHIEV YH++RE++ +K L+V + T + AD FTK Sbjct: 1197 FHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTK 1237 Score = 71.2 bits (173), Expect(3) = 4e-48 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Frame = +3 Query: 3 GMQDCKV*TTPIPTKSSSYTTVDSAFG--DVTLYRSIVRALQYLTITRRDIAYAVNMVCQ 176 GM DCK +TP+ T G D + YRS+V ALQYLT+TR DI + VN VCQ Sbjct: 1005 GMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQ 1064 Query: 177 YMHAPLESHFTAVKCILR 230 ++HAP H+ A+K ILR Sbjct: 1065 FLHAPTIVHWAAMKRILR 1082 Score = 55.1 bits (131), Expect(3) = 4e-48 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Frame = +2 Query: 233 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKKHQQWP 409 +K + GL + S ++ + YSDADWAG+ DR+S G+ VFLGDN + W+AKK P Sbjct: 1084 LKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVP 1143 >gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group] Length = 1096 Score = 111 bits (278), Expect(3) = 5e-48 Identities = 53/101 (52%), Positives = 71/101 (70%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKAL T E+ W+ L +L I VP ++WCDNI A + +NP Sbjct: 978 RKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIANPV 1037 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 F+ARTKHIEV YH++RE+V +K LQV ++ST + D FTK Sbjct: 1038 FYARTKHIEVDYHFVRERVAQKLLQVEYISTNDQVVDGFTK 1078 Score = 73.6 bits (179), Expect(3) = 5e-48 Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTP--IPTKSSSYTTVDSAFGDVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK TP I K S+Y D T YRS+V AL YLT+TR D++++VN VCQY Sbjct: 847 MSDCKAVNTPLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQY 906 Query: 180 MHAPLESHFTAVKCILR 230 +HAP H+ A K ILR Sbjct: 907 LHAPTTEHWAAAKRILR 923 Score = 53.9 bits (128), Expect(3) = 5e-48 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T++ GL S +L +A+SDADWAG DR+S G+ VF+G N + WSA+K Sbjct: 925 LKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARK 979 >gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 658 Score = 111 bits (278), Expect(3) = 5e-48 Identities = 53/101 (52%), Positives = 71/101 (70%) Frame = +1 Query: 388 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 567 +K TV+RSSTE+EYKAL T E+ W+ L +L I VP ++WCDNI A + +NP Sbjct: 199 RKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYMIANPV 258 Query: 568 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 690 F+ARTKHIEV YH++RE+V +K LQV ++ST + D FTK Sbjct: 259 FYARTKHIEVDYHFVRERVAQKLLQVEYISTNDQVVDGFTK 299 Score = 73.6 bits (179), Expect(3) = 5e-48 Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +3 Query: 6 MQDCKV*TTP--IPTKSSSYTTVDSAFGDVTLYRSIVRALQYLTITRRDIAYAVNMVCQY 179 M DCK TP I K S+Y D T YRS+V AL YLT+TR D++++VN VCQY Sbjct: 68 MSDCKAVNTPLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQY 127 Query: 180 MHAPLESHFTAVKCILR 230 +HAP H+ A K ILR Sbjct: 128 LHAPTTEHWAAAKRILR 144 Score = 53.9 bits (128), Expect(3) = 5e-48 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +2 Query: 233 IKGTIQYGLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 394 +K T++ GL S +L +A+SDADWAG DR+S G+ VF+G N + WSA+K Sbjct: 146 LKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARK 200